[INFO] fetching crate libhmmer-sys 0.4.0...
[INFO] testing libhmmer-sys-0.4.0 against try#c2e32f1c9652b13ed99608599c1e855462f421f3 for pr-146098-7
[INFO] extracting crate libhmmer-sys 0.4.0 into /workspace/builds/worker-6-tc2/source
[INFO] started tweaking crates.io crate libhmmer-sys 0.4.0
[INFO] finished tweaking crates.io crate libhmmer-sys 0.4.0
[INFO] tweaked toml for crates.io crate libhmmer-sys 0.4.0 written to /workspace/builds/worker-6-tc2/source/Cargo.toml
[INFO] validating manifest of crates.io crate libhmmer-sys 0.4.0 on toolchain c2e32f1c9652b13ed99608599c1e855462f421f3
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+c2e32f1c9652b13ed99608599c1e855462f421f3" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+c2e32f1c9652b13ed99608599c1e855462f421f3" "generate-lockfile" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] [stderr]     Updating crates.io index
[INFO] [stderr]     Blocking waiting for file lock on package cache
[INFO] [stderr]      Locking 49 packages to latest compatible versions
[INFO] [stderr]       Adding bindgen v0.65.1 (available: v0.72.1)
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+c2e32f1c9652b13ed99608599c1e855462f421f3" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-6-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-6-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:4848fb76d95f26979359cc7e45710b1dbc8f3acb7aeedee7c460d7702230f228" "/opt/rustwide/cargo-home/bin/cargo" "+c2e32f1c9652b13ed99608599c1e855462f421f3" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] [stdout] e46a65041a1dfb5d27686eec0743b7ca5096ebfdaf44e8a83e1e47ed4f920383
[INFO] running `Command { std: "docker" "start" "-a" "e46a65041a1dfb5d27686eec0743b7ca5096ebfdaf44e8a83e1e47ed4f920383", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "e46a65041a1dfb5d27686eec0743b7ca5096ebfdaf44e8a83e1e47ed4f920383", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "e46a65041a1dfb5d27686eec0743b7ca5096ebfdaf44e8a83e1e47ed4f920383", kill_on_drop: false }`
[INFO] [stdout] e46a65041a1dfb5d27686eec0743b7ca5096ebfdaf44e8a83e1e47ed4f920383
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-6-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-6-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:4848fb76d95f26979359cc7e45710b1dbc8f3acb7aeedee7c460d7702230f228" "/opt/rustwide/cargo-home/bin/cargo" "+c2e32f1c9652b13ed99608599c1e855462f421f3" "build" "--frozen" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] 368a0039a204c84d11add41765e7499a2b33f54950771a2b7c244f4471b893ea
[INFO] running `Command { std: "docker" "start" "-a" "368a0039a204c84d11add41765e7499a2b33f54950771a2b7c244f4471b893ea", kill_on_drop: false }`
[INFO] [stderr]    Compiling proc-macro2 v1.0.103
[INFO] [stderr]    Compiling libc v0.2.177
[INFO] [stderr]    Compiling quote v1.0.42
[INFO] [stderr]    Compiling prettyplease v0.2.37
[INFO] [stderr]    Compiling bindgen v0.65.1
[INFO] [stderr]    Compiling fs_extra v1.3.0
[INFO] [stderr]    Compiling syn v2.0.110
[INFO] [stderr]    Compiling clang-sys v1.8.1
[INFO] [stderr]    Compiling num_cpus v1.17.0
[INFO] [stderr]    Compiling libhmmer-sys v0.4.0 (/opt/rustwide/workdir)
[INFO] [stderr]     Finished `dev` profile [unoptimized + debuginfo] target(s) in 50.10s
[INFO] running `Command { std: "docker" "inspect" "368a0039a204c84d11add41765e7499a2b33f54950771a2b7c244f4471b893ea", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "368a0039a204c84d11add41765e7499a2b33f54950771a2b7c244f4471b893ea", kill_on_drop: false }`
[INFO] [stdout] 368a0039a204c84d11add41765e7499a2b33f54950771a2b7c244f4471b893ea
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-6-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-6-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:4848fb76d95f26979359cc7e45710b1dbc8f3acb7aeedee7c460d7702230f228" "/opt/rustwide/cargo-home/bin/cargo" "+c2e32f1c9652b13ed99608599c1e855462f421f3" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] fcb254ec05cd06be43b3305fd036e21cee7231f7c9e60cd22db31b18f44250e8
[INFO] running `Command { std: "docker" "start" "-a" "fcb254ec05cd06be43b3305fd036e21cee7231f7c9e60cd22db31b18f44250e8", kill_on_drop: false }`
[INFO] [stderr]    Compiling libhmmer-sys v0.4.0 (/opt/rustwide/workdir)
[INFO] [stderr]     Finished `test` profile [unoptimized + debuginfo] target(s) in 11.54s
[INFO] running `Command { std: "docker" "inspect" "fcb254ec05cd06be43b3305fd036e21cee7231f7c9e60cd22db31b18f44250e8", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "fcb254ec05cd06be43b3305fd036e21cee7231f7c9e60cd22db31b18f44250e8", kill_on_drop: false }`
[INFO] [stdout] fcb254ec05cd06be43b3305fd036e21cee7231f7c9e60cd22db31b18f44250e8
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-6-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-6-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:4848fb76d95f26979359cc7e45710b1dbc8f3acb7aeedee7c460d7702230f228" "/opt/rustwide/cargo-home/bin/cargo" "+c2e32f1c9652b13ed99608599c1e855462f421f3" "test" "--frozen", kill_on_drop: false }`
[INFO] [stdout] c425e327d1f05f0c7574a0295e5c32a40fae5c8f5e6c7102fa81705f03f1a59d
[INFO] running `Command { std: "docker" "start" "-a" "c425e327d1f05f0c7574a0295e5c32a40fae5c8f5e6c7102fa81705f03f1a59d", kill_on_drop: false }`
[INFO] [stderr]     Finished `test` profile [unoptimized + debuginfo] target(s) in 0.10s
[INFO] [stderr]      Running unittests src/lib.rs (/opt/rustwide/target/debug/deps/libhmmer_sys-8227e7b424bf1cbd)
[INFO] [stdout] 
[INFO] [stdout] running 67 tests
[INFO] [stdout] test bindgen_test_layout_ESL_ALPHABET ... ok
[INFO] [stdout] test bindgen_test_layout_ESL_FILEPARSER ... ok
[INFO] [stdout] test bindgen_test_layout_ESL_HMM ... ok
[INFO] [stdout] test bindgen_test_layout_ESL_DMATRIX ... ok
[INFO] [stdout] test bindgen_test_layout_ESL_HMX ... ok
[INFO] [stdout] test bindgen_test_layout_ESL_HISTOGRAM ... ok
[INFO] [stdout] test bindgen_test_layout_ESL_KEYHASH ... ok
[INFO] [stdout] test bindgen_test_layout_ESL_BITFIELD ... ok
[INFO] [stdout] test bindgen_test_layout_ESL_MIXDCHLET ... ok
[INFO] [stdout] test bindgen_test_layout_ESL_BUFFER ... ok
[INFO] [stdout] test bindgen_test_layout_ESL_GETOPTS ... ok
[INFO] [stdout] test bindgen_test_layout_ESL_MSAFILE ... ok
[INFO] [stdout] test bindgen_test_layout_ESL_MSAFILE_FMTDATA ... ok
[INFO] [stdout] test bindgen_test_layout_ESL_OPTIONS ... ok
[INFO] [stdout] test bindgen_test_layout_ESL_PERMUTATION ... ok
[INFO] [stdout] test bindgen_test_layout_ESL_RAND64 ... ok
[INFO] [stdout] test bindgen_test_layout_ESL_RANDOMNESS ... ok
[INFO] [stdout] test bindgen_test_layout_ESL_SCOREMATRIX ... ok
[INFO] [stdout] test bindgen_test_layout_ESL_SKEY ... ok
[INFO] [stdout] test bindgen_test_layout_ESL_SQ ... ok
[INFO] [stdout] test bindgen_test_layout_ESL_SQDATA ... ok
[INFO] [stdout] test bindgen_test_layout_ESL_SSI ... ok
[INFO] [stdout] test bindgen_test_layout_ESL_SQ_BLOCK ... ok
[INFO] [stdout] test bindgen_test_layout_ESL_MSA ... ok
[INFO] [stdout] test bindgen_test_layout_ESL_NEWSSI ... ok
[INFO] [stdout] test bindgen_test_layout_FM_CFG ... ok
[INFO] [stdout] test bindgen_test_layout_ESL_STOPWATCH ... ok
[INFO] [stdout] test bindgen_test_layout_P7_OM_BLOCK ... ok
[INFO] [stdout] test bindgen_test_layout_esl_sqcache_s ... ok
[INFO] [stdout] test bindgen_test_layout_esl_sqascii_s ... ok
[INFO] [stdout] test bindgen_test_layout___pthread_internal_list ... ok
[INFO] [stdout] test bindgen_test_layout_esl_sqio_s ... ok
[INFO] [stdout] test bindgen_test_layout___pthread_mutex_s ... ok
[INFO] [stdout] test bindgen_test_layout__IO_FILE ... ok
[INFO] [stdout] test bindgen_test_layout___va_list_tag ... ok
[INFO] [stdout] test bindgen_test_layout_fm_interval_s ... ok
[INFO] [stdout] test bindgen_test_layout_esl_sqncbi_s ... ok
[INFO] [stdout] test bindgen_test_layout_fm_data_s ... ok
[INFO] [stdout] test bindgen_test_layout_p7_dom_s ... ok
[INFO] [stdout] test bindgen_test_layout_esl_sqncbi_vol_s ... ok
[INFO] [stdout] test bindgen_test_layout_p7_domaindef_s ... ok
[INFO] [stdout] test bindgen_test_layout_fm_ambiglist_s ... ok
[INFO] [stdout] test bindgen_test_layout_p7_gmx_s ... ok
[INFO] [stdout] test bindgen_test_layout_p7_builder_s ... ok
[INFO] [stdout] test bindgen_test_layout_p7_hmm_window_s ... ok
[INFO] [stdout] test bindgen_test_layout_p7_omx_s ... ok
[INFO] [stdout] test bindgen_test_layout_p7_prior_s ... ok
[INFO] [stdout] test bindgen_test_layout_p7_scoredata_s ... ok
[INFO] [stdout] test bindgen_test_layout_fm_metadata_s ... ok
[INFO] [stdout] test bindgen_test_layout_p7_profile_s ... ok
[INFO] [stdout] test bindgen_test_layout_fm_seqdata_s ... ok
[INFO] [stdout] test bindgen_test_layout_p7_scoredata_s__bindgen_ty_1 ... ok
[INFO] [stdout] test bindgen_test_layout_p7_hmmfile_s ... ok
[INFO] [stdout] test bindgen_test_layout_p7_alidisplay_s ... ok
[INFO] [stdout] test bindgen_test_layout_p7_hmm_window_list_s ... ok
[INFO] [stdout] test bindgen_test_layout_p7_bg_s ... ok
[INFO] [stdout] test bindgen_test_layout_p7_trace_s ... ok
[INFO] [stdout] test bindgen_test_layout_p7_oprofile_s ... ok
[INFO] [stdout] test bindgen_test_layout_p7_spcoord_s ... ok
[INFO] [stdout] test bindgen_test_layout_p7_tophits_s ... ok
[INFO] [stdout] test bindgen_test_layout_tms ... ok
[INFO] [stdout] test bindgen_test_layout_pthread_mutex_t ... ok
[INFO] [stdout] test bindgen_test_layout_p7_spensemble_s ... ok
[INFO] [stdout] test bindgen_test_layout_ESL_PKEY ... ok
[INFO] [stdout] test bindgen_test_layout_p7_hit_s ... ok
[INFO] [stdout] test bindgen_test_layout_p7_hmm_s ... ok
[INFO] [stdout] test bindgen_test_layout_p7_pipeline_s ... ok
[INFO] [stdout] 
[INFO] [stdout] test result: ok. 67 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.01s
[INFO] [stdout] 
[INFO] [stderr]    Doc-tests libhmmer_sys
[INFO] [stdout] 
[INFO] [stdout] running 0 tests
[INFO] [stdout] 
[INFO] [stdout] test result: ok. 0 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.00s
[INFO] [stdout] 
[INFO] running `Command { std: "docker" "inspect" "c425e327d1f05f0c7574a0295e5c32a40fae5c8f5e6c7102fa81705f03f1a59d", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "c425e327d1f05f0c7574a0295e5c32a40fae5c8f5e6c7102fa81705f03f1a59d", kill_on_drop: false }`
[INFO] [stdout] c425e327d1f05f0c7574a0295e5c32a40fae5c8f5e6c7102fa81705f03f1a59d