[INFO] fetching crate krakenuniq-rs 0.0.4... [INFO] testing krakenuniq-rs-0.0.4 against try#c2e32f1c9652b13ed99608599c1e855462f421f3 for pr-146098-7 [INFO] extracting crate krakenuniq-rs 0.0.4 into /workspace/builds/worker-1-tc2/source [INFO] started tweaking crates.io crate krakenuniq-rs 0.0.4 [INFO] finished tweaking crates.io crate krakenuniq-rs 0.0.4 [INFO] tweaked toml for crates.io crate krakenuniq-rs 0.0.4 written to /workspace/builds/worker-1-tc2/source/Cargo.toml [INFO] validating manifest of crates.io crate krakenuniq-rs 0.0.4 on toolchain c2e32f1c9652b13ed99608599c1e855462f421f3 [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+c2e32f1c9652b13ed99608599c1e855462f421f3" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] crate crates.io crate krakenuniq-rs 0.0.4 already has a lockfile, it will not be regenerated [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+c2e32f1c9652b13ed99608599c1e855462f421f3" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-1-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-1-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:4848fb76d95f26979359cc7e45710b1dbc8f3acb7aeedee7c460d7702230f228" "/opt/rustwide/cargo-home/bin/cargo" "+c2e32f1c9652b13ed99608599c1e855462f421f3" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] 9aec2d4f5ce24a97ca41d53df79bb794e654cb630eb3a9bd9891ccf52a91e375 [INFO] running `Command { std: "docker" "start" "-a" "9aec2d4f5ce24a97ca41d53df79bb794e654cb630eb3a9bd9891ccf52a91e375", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "9aec2d4f5ce24a97ca41d53df79bb794e654cb630eb3a9bd9891ccf52a91e375", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "9aec2d4f5ce24a97ca41d53df79bb794e654cb630eb3a9bd9891ccf52a91e375", kill_on_drop: false }` [INFO] [stdout] 9aec2d4f5ce24a97ca41d53df79bb794e654cb630eb3a9bd9891ccf52a91e375 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-1-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-1-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:4848fb76d95f26979359cc7e45710b1dbc8f3acb7aeedee7c460d7702230f228" "/opt/rustwide/cargo-home/bin/cargo" "+c2e32f1c9652b13ed99608599c1e855462f421f3" "build" "--frozen" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] 7ebc0a8a21717acff77066b6e615d7c1102b3a3f10ceb11add01a334f302ebab [INFO] running `Command { std: "docker" "start" "-a" "7ebc0a8a21717acff77066b6e615d7c1102b3a3f10ceb11add01a334f302ebab", kill_on_drop: false }` [INFO] [stderr] Compiling proc-macro2 v1.0.92 [INFO] [stderr] Compiling unicode-ident v1.0.14 [INFO] [stderr] Compiling libc v0.2.169 [INFO] [stderr] Compiling memchr v2.7.4 [INFO] [stderr] Compiling rustversion v1.0.19 [INFO] [stderr] Compiling autocfg v1.4.0 [INFO] [stderr] Compiling regex-syntax v0.8.5 [INFO] [stderr] Compiling rayon-core v1.12.1 [INFO] [stderr] Compiling once_cell v1.20.2 [INFO] [stderr] Compiling portable-atomic v1.10.0 [INFO] [stderr] Compiling utf8parse v0.2.2 [INFO] [stderr] Compiling ahash v0.8.11 [INFO] [stderr] Compiling log v0.4.22 [INFO] [stderr] Compiling is_terminal_polyfill v1.70.1 [INFO] [stderr] Compiling unicode-width v0.2.0 [INFO] [stderr] Compiling smallvec v1.13.2 [INFO] [stderr] Compiling anstyle-parse v0.2.6 [INFO] [stderr] Compiling anstyle v1.0.10 [INFO] [stderr] Compiling anstyle-query v1.1.2 [INFO] [stderr] Compiling colorchoice v1.0.3 [INFO] [stderr] Compiling thiserror v2.0.9 [INFO] [stderr] Compiling adler2 v2.0.0 [INFO] [stderr] Compiling number_prefix v0.4.0 [INFO] [stderr] Compiling lock_api v0.4.12 [INFO] [stderr] Compiling miniz_oxide v0.8.2 [INFO] [stderr] Compiling either v1.13.0 [INFO] [stderr] Compiling maplit v1.0.2 [INFO] [stderr] Compiling zerocopy v0.7.35 [INFO] [stderr] Compiling colored v2.2.0 [INFO] [stderr] Compiling anstream v0.6.18 [INFO] [stderr] Compiling quote v1.0.38 [INFO] [stderr] Compiling rayon v1.10.0 [INFO] [stderr] Compiling syn v1.0.109 [INFO] [stderr] Compiling syn v2.0.93 [INFO] [stderr] Compiling flate2 v1.0.35 [INFO] [stderr] Compiling aho-corasick v1.1.3 [INFO] [stderr] Compiling getrandom v0.2.15 [INFO] [stderr] Compiling console v0.15.10 [INFO] [stderr] Compiling parking_lot_core v0.9.10 [INFO] [stderr] Compiling parking_lot v0.12.3 [INFO] [stderr] Compiling indicatif v0.17.9 [INFO] [stderr] Compiling regex-automata v0.4.9 [INFO] [stderr] Compiling strum_macros v0.24.3 [INFO] [stderr] Compiling thiserror-impl v2.0.9 [INFO] [stderr] Compiling strum v0.24.1 [INFO] [stderr] Compiling spinners v4.1.1 [INFO] [stderr] Compiling regex v1.11.1 [INFO] [stderr] Compiling env_filter v0.1.3 [INFO] [stderr] Compiling env_logger v0.11.6 [INFO] [stderr] Compiling krakenuniq-rs v0.0.4 (/opt/rustwide/workdir) [INFO] [stdout] warning: unused import: `std::collections::BTreeMap` [INFO] [stdout] --> src/krakendb.rs:3:5 [INFO] [stdout] | [INFO] [stdout] 3 | use std::collections::BTreeMap; [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_imports)]` (part of `#[warn(unused)]`) on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused imports: `BufRead` and `BufReader` [INFO] [stdout] --> src/krakendb.rs:5:15 [INFO] [stdout] | [INFO] [stdout] 5 | use std::io::{BufRead, BufReader, Error as IoError, ErrorKind, Read, Seek, SeekFrom}; [INFO] [stdout] | ^^^^^^^ ^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused imports: `ErrorKind` and `Error` [INFO] [stdout] --> src/taxdb.rs:5:35 [INFO] [stdout] | [INFO] [stdout] 5 | use std::io::{BufRead, BufReader, Error, ErrorKind}; [INFO] [stdout] | ^^^^^ ^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `ahash::AHashMap` [INFO] [stdout] --> src/lib.rs:9:5 [INFO] [stdout] | [INFO] [stdout] 9 | use ahash::AHashMap; [INFO] [stdout] | ^^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `old_base` [INFO] [stdout] --> src/classify/classify_sequence.rs:41:29 [INFO] [stdout] | [INFO] [stdout] 41 | fn roll_kmer_2bit(old: u64, old_base: u8, new_base: u8, k: usize) -> (u64, bool) { [INFO] [stdout] | ^^^^^^^^ help: if this is intentional, prefix it with an underscore: `_old_base` [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_variables)]` (part of `#[warn(unused)]`) on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: variable does not need to be mutable [INFO] [stdout] --> src/classify/classify_sequence.rs:262:14 [INFO] [stdout] | [INFO] [stdout] 262 | let (mut encoded, valid) = encode_first_kmer(window); [INFO] [stdout] | ----^^^^^^^ [INFO] [stdout] | | [INFO] [stdout] | help: remove this `mut` [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_mut)]` (part of `#[warn(unused)]`) on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `t0` [INFO] [stdout] --> src/lib.rs:141:9 [INFO] [stdout] | [INFO] [stdout] 141 | let t0 = Instant::now(); [INFO] [stdout] | ^^ help: if this is intentional, prefix it with an underscore: `_t0` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `t1` [INFO] [stdout] --> src/lib.rs:147:9 [INFO] [stdout] | [INFO] [stdout] 147 | let t1 = Instant::now(); [INFO] [stdout] | ^^ help: if this is intentional, prefix it with an underscore: `_t1` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: function `roll_kmer_2bit` is never used [INFO] [stdout] --> src/classify/classify_sequence.rs:41:4 [INFO] [stdout] | [INFO] [stdout] 41 | fn roll_kmer_2bit(old: u64, old_base: u8, new_base: u8, k: usize) -> (u64, bool) { [INFO] [stdout] | ^^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(dead_code)]` (part of `#[warn(unused)]`) on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stderr] Finished `dev` profile [unoptimized + debuginfo] target(s) in 19.77s [INFO] running `Command { std: "docker" "inspect" "7ebc0a8a21717acff77066b6e615d7c1102b3a3f10ceb11add01a334f302ebab", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "7ebc0a8a21717acff77066b6e615d7c1102b3a3f10ceb11add01a334f302ebab", kill_on_drop: false }` [INFO] [stdout] 7ebc0a8a21717acff77066b6e615d7c1102b3a3f10ceb11add01a334f302ebab [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-1-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-1-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:4848fb76d95f26979359cc7e45710b1dbc8f3acb7aeedee7c460d7702230f228" "/opt/rustwide/cargo-home/bin/cargo" "+c2e32f1c9652b13ed99608599c1e855462f421f3" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] 164ac96d9bebe8e8a38ffd568a7f28eee3798858ceced15ce8e054b8b2f3effa [INFO] running `Command { std: "docker" "start" "-a" "164ac96d9bebe8e8a38ffd568a7f28eee3798858ceced15ce8e054b8b2f3effa", kill_on_drop: false }` [INFO] [stdout] warning: unused import: `std::collections::BTreeMap` [INFO] [stdout] --> src/krakendb.rs:3:5 [INFO] [stdout] | [INFO] [stdout] 3 | use std::collections::BTreeMap; [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_imports)]` (part of `#[warn(unused)]`) on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused imports: `BufRead` and `BufReader` [INFO] [stdout] --> src/krakendb.rs:5:15 [INFO] [stdout] | [INFO] [stdout] 5 | use std::io::{BufRead, BufReader, Error as IoError, ErrorKind, Read, Seek, SeekFrom}; [INFO] [stdout] | ^^^^^^^ ^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused imports: `ErrorKind` and `Error` [INFO] [stdout] --> src/taxdb.rs:5:35 [INFO] [stdout] | [INFO] [stdout] 5 | use std::io::{BufRead, BufReader, Error, ErrorKind}; [INFO] [stdout] | ^^^^^ ^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `ahash::AHashMap` [INFO] [stdout] --> src/lib.rs:9:5 [INFO] [stdout] | [INFO] [stdout] 9 | use ahash::AHashMap; [INFO] [stdout] | ^^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `old_base` [INFO] [stdout] --> src/classify/classify_sequence.rs:41:29 [INFO] [stdout] | [INFO] [stdout] 41 | fn roll_kmer_2bit(old: u64, old_base: u8, new_base: u8, k: usize) -> (u64, bool) { [INFO] [stdout] | ^^^^^^^^ help: if this is intentional, prefix it with an underscore: `_old_base` [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_variables)]` (part of `#[warn(unused)]`) on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: variable does not need to be mutable [INFO] [stdout] --> src/classify/classify_sequence.rs:262:14 [INFO] [stdout] | [INFO] [stdout] 262 | let (mut encoded, valid) = encode_first_kmer(window); [INFO] [stdout] | ----^^^^^^^ [INFO] [stdout] | | [INFO] [stdout] | help: remove this `mut` [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_mut)]` (part of `#[warn(unused)]`) on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `t0` [INFO] [stdout] --> src/lib.rs:141:9 [INFO] [stdout] | [INFO] [stdout] 141 | let t0 = Instant::now(); [INFO] [stdout] | ^^ help: if this is intentional, prefix it with an underscore: `_t0` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `t1` [INFO] [stdout] --> src/lib.rs:147:9 [INFO] [stdout] | [INFO] [stdout] 147 | let t1 = Instant::now(); [INFO] [stdout] | ^^ help: if this is intentional, prefix it with an underscore: `_t1` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: function `roll_kmer_2bit` is never used [INFO] [stdout] --> src/classify/classify_sequence.rs:41:4 [INFO] [stdout] | [INFO] [stdout] 41 | fn roll_kmer_2bit(old: u64, old_base: u8, new_base: u8, k: usize) -> (u64, bool) { [INFO] [stdout] | ^^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(dead_code)]` (part of `#[warn(unused)]`) on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stderr] Compiling krakenuniq-rs v0.0.4 (/opt/rustwide/workdir) [INFO] [stdout] warning: unused import: `std::collections::BTreeMap` [INFO] [stdout] --> src/krakendb.rs:3:5 [INFO] [stdout] | [INFO] [stdout] 3 | use std::collections::BTreeMap; [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_imports)]` (part of `#[warn(unused)]`) on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused imports: `BufRead` and `BufReader` [INFO] [stdout] --> src/krakendb.rs:5:15 [INFO] [stdout] | [INFO] [stdout] 5 | use std::io::{BufRead, BufReader, Error as IoError, ErrorKind, Read, Seek, SeekFrom}; [INFO] [stdout] | ^^^^^^^ ^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused imports: `ErrorKind` and `Error` [INFO] [stdout] --> src/taxdb.rs:5:35 [INFO] [stdout] | [INFO] [stdout] 5 | use std::io::{BufRead, BufReader, Error, ErrorKind}; [INFO] [stdout] | ^^^^^ ^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `ahash::AHashMap` [INFO] [stdout] --> src/lib.rs:9:5 [INFO] [stdout] | [INFO] [stdout] 9 | use ahash::AHashMap; [INFO] [stdout] | ^^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `old_base` [INFO] [stdout] --> src/classify/classify_sequence.rs:41:29 [INFO] [stdout] | [INFO] [stdout] 41 | fn roll_kmer_2bit(old: u64, old_base: u8, new_base: u8, k: usize) -> (u64, bool) { [INFO] [stdout] | ^^^^^^^^ help: if this is intentional, prefix it with an underscore: `_old_base` [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_variables)]` (part of `#[warn(unused)]`) on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: variable does not need to be mutable [INFO] [stdout] --> src/classify/classify_sequence.rs:262:14 [INFO] [stdout] | [INFO] [stdout] 262 | let (mut encoded, valid) = encode_first_kmer(window); [INFO] [stdout] | ----^^^^^^^ [INFO] [stdout] | | [INFO] [stdout] | help: remove this `mut` [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_mut)]` (part of `#[warn(unused)]`) on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `t0` [INFO] [stdout] --> src/lib.rs:141:9 [INFO] [stdout] | [INFO] [stdout] 141 | let t0 = Instant::now(); [INFO] [stdout] | ^^ help: if this is intentional, prefix it with an underscore: `_t0` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `t1` [INFO] [stdout] --> src/lib.rs:147:9 [INFO] [stdout] | [INFO] [stdout] 147 | let t1 = Instant::now(); [INFO] [stdout] | ^^ help: if this is intentional, prefix it with an underscore: `_t1` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: function `roll_kmer_2bit` is never used [INFO] [stdout] --> src/classify/classify_sequence.rs:41:4 [INFO] [stdout] | [INFO] [stdout] 41 | fn roll_kmer_2bit(old: u64, old_base: u8, new_base: u8, k: usize) -> (u64, bool) { [INFO] [stdout] | ^^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(dead_code)]` (part of `#[warn(unused)]`) on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stderr] Finished `test` profile [unoptimized + debuginfo] target(s) in 1.95s [INFO] running `Command { std: "docker" "inspect" "164ac96d9bebe8e8a38ffd568a7f28eee3798858ceced15ce8e054b8b2f3effa", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "164ac96d9bebe8e8a38ffd568a7f28eee3798858ceced15ce8e054b8b2f3effa", kill_on_drop: false }` [INFO] [stdout] 164ac96d9bebe8e8a38ffd568a7f28eee3798858ceced15ce8e054b8b2f3effa [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-1-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-1-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:4848fb76d95f26979359cc7e45710b1dbc8f3acb7aeedee7c460d7702230f228" "/opt/rustwide/cargo-home/bin/cargo" "+c2e32f1c9652b13ed99608599c1e855462f421f3" "test" "--frozen", kill_on_drop: false }` [INFO] [stdout] 7240274d6d5720a9ec37d2442f32ed32161842d90651b42ebbc004c7df3bebe2 [INFO] running `Command { std: "docker" "start" "-a" "7240274d6d5720a9ec37d2442f32ed32161842d90651b42ebbc004c7df3bebe2", kill_on_drop: false }` [INFO] [stderr] warning: unused import: `std::collections::BTreeMap` [INFO] [stderr] --> src/krakendb.rs:3:5 [INFO] [stderr] | [INFO] [stderr] 3 | use std::collections::BTreeMap; [INFO] [stderr] | ^^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stderr] | [INFO] [stderr] = note: `#[warn(unused_imports)]` (part of `#[warn(unused)]`) on by default [INFO] [stderr] [INFO] [stderr] warning: unused imports: `BufRead` and `BufReader` [INFO] [stderr] --> src/krakendb.rs:5:15 [INFO] [stderr] | [INFO] [stderr] 5 | use std::io::{BufRead, BufReader, Error as IoError, ErrorKind, Read, Seek, SeekFrom}; [INFO] [stderr] | ^^^^^^^ ^^^^^^^^^ [INFO] [stderr] [INFO] [stderr] warning: unused imports: `ErrorKind` and `Error` [INFO] [stderr] --> src/taxdb.rs:5:35 [INFO] [stderr] | [INFO] [stderr] 5 | use std::io::{BufRead, BufReader, Error, ErrorKind}; [INFO] [stderr] | ^^^^^ ^^^^^^^^^ [INFO] [stderr] [INFO] [stderr] warning: unused import: `ahash::AHashMap` [INFO] [stderr] --> src/lib.rs:9:5 [INFO] [stderr] | [INFO] [stderr] 9 | use ahash::AHashMap; [INFO] [stderr] | ^^^^^^^^^^^^^^^ [INFO] [stderr] [INFO] [stderr] warning: unused variable: `old_base` [INFO] [stderr] --> src/classify/classify_sequence.rs:41:29 [INFO] [stderr] | [INFO] [stderr] 41 | fn roll_kmer_2bit(old: u64, old_base: u8, new_base: u8, k: usize) -> (u64, bool) { [INFO] [stderr] | ^^^^^^^^ help: if this is intentional, prefix it with an underscore: `_old_base` [INFO] [stderr] | [INFO] [stderr] = note: `#[warn(unused_variables)]` (part of `#[warn(unused)]`) on by default [INFO] [stderr] [INFO] [stderr] warning: variable does not need to be mutable [INFO] [stderr] --> src/classify/classify_sequence.rs:262:14 [INFO] [stderr] | [INFO] [stderr] 262 | let (mut encoded, valid) = encode_first_kmer(window); [INFO] [stderr] | ----^^^^^^^ [INFO] [stderr] | | [INFO] [stderr] | help: remove this `mut` [INFO] [stderr] | [INFO] [stderr] = note: `#[warn(unused_mut)]` (part of `#[warn(unused)]`) on by default [INFO] [stderr] [INFO] [stderr] warning: unused variable: `t0` [INFO] [stderr] --> src/lib.rs:141:9 [INFO] [stderr] | [INFO] [stderr] 141 | let t0 = Instant::now(); [INFO] [stderr] | ^^ help: if this is intentional, prefix it with an underscore: `_t0` [INFO] [stderr] [INFO] [stderr] warning: unused variable: `t1` [INFO] [stderr] --> src/lib.rs:147:9 [INFO] [stderr] | [INFO] [stderr] 147 | let t1 = Instant::now(); [INFO] [stderr] | ^^ help: if this is intentional, prefix it with an underscore: `_t1` [INFO] [stderr] [INFO] [stderr] warning: function `roll_kmer_2bit` is never used [INFO] [stderr] --> src/classify/classify_sequence.rs:41:4 [INFO] [stderr] | [INFO] [stderr] 41 | fn roll_kmer_2bit(old: u64, old_base: u8, new_base: u8, k: usize) -> (u64, bool) { [INFO] [stderr] | ^^^^^^^^^^^^^^ [INFO] [stderr] | [INFO] [stderr] = note: `#[warn(dead_code)]` (part of `#[warn(unused)]`) on by default [INFO] [stderr] [INFO] [stderr] warning: `krakenuniq-rs` (lib) generated 9 warnings (run `cargo fix --lib -p krakenuniq-rs` to apply 8 suggestions) [INFO] [stderr] warning: `krakenuniq-rs` (lib test) generated 9 warnings (9 duplicates) [INFO] [stderr] Finished `test` profile [unoptimized + debuginfo] target(s) in 0.10s [INFO] [stderr] Running unittests src/lib.rs (/opt/rustwide/target/debug/deps/krakenuniq_rs-87d84e4c32da158e) [INFO] [stdout] [INFO] [stdout] running 1 test [INFO] [stdout] test tests::test_classify_reads_api ... FAILED [INFO] [stdout] [INFO] [stdout] failures: [INFO] [stdout] [INFO] [stdout] ---- tests::test_classify_reads_api stdout ---- [INFO] [stdout] [INFO] [stdout] thread 'tests::test_classify_reads_api' (25) panicked at src/lib.rs:222:14: [INFO] [stdout] Cannot read directory 'barcode03': Os { code: 2, kind: NotFound, message: "No such file or directory" } [INFO] [stdout] stack backtrace: [INFO] [stdout] 0: 0x5614df8277d2 - std::backtrace_rs::backtrace::libunwind::trace::h9ea1e07ac77a25d7 [INFO] [stdout] at /rustc/c2e32f1c9652b13ed99608599c1e855462f421f3/library/std/src/../../backtrace/src/backtrace/libunwind.rs:117:9 [INFO] [stdout] 1: 0x5614df8277d2 - std::backtrace_rs::backtrace::trace_unsynchronized::h72b75eb83b53d15a [INFO] [stdout] at /rustc/c2e32f1c9652b13ed99608599c1e855462f421f3/library/std/src/../../backtrace/src/backtrace/mod.rs:66:14 [INFO] [stdout] 2: 0x5614df8277d2 - std::sys::backtrace::_print_fmt::h255777b7ec902439 [INFO] [stdout] at /rustc/c2e32f1c9652b13ed99608599c1e855462f421f3/library/std/src/sys/backtrace.rs:66:9 [INFO] [stdout] 3: 0x5614df8277d2 - ::fmt::h8a1ac49fcd7ee8ce [INFO] [stdout] at /rustc/c2e32f1c9652b13ed99608599c1e855462f421f3/library/std/src/sys/backtrace.rs:39:26 [INFO] [stdout] 4: 0x5614df8393ef - core::fmt::rt::Argument::fmt::h635cbf3c6754cc90 [INFO] [stdout] at /rustc/c2e32f1c9652b13ed99608599c1e855462f421f3/library/core/src/fmt/rt.rs:173:76 [INFO] [stdout] 5: 0x5614df8393ef - core::fmt::write::hbdcc0ec4f1bab1db [INFO] [stdout] at /rustc/c2e32f1c9652b13ed99608599c1e855462f421f3/library/core/src/fmt/mod.rs:1469:25 [INFO] [stdout] 6: 0x5614df7f45b3 - std::io::default_write_fmt::h2580ece0d4b58e51 [INFO] [stdout] at /rustc/c2e32f1c9652b13ed99608599c1e855462f421f3/library/std/src/io/mod.rs:639:11 [INFO] [stdout] 7: 0x5614df7f45b3 - std::io::Write::write_fmt::hac9e42858f273b87 [INFO] [stdout] at /rustc/c2e32f1c9652b13ed99608599c1e855462f421f3/library/std/src/io/mod.rs:1954:13 [INFO] [stdout] 8: 0x5614df8007c2 - std::sys::backtrace::BacktraceLock::print::h052febbd86f7bf07 [INFO] [stdout] at /rustc/c2e32f1c9652b13ed99608599c1e855462f421f3/library/std/src/sys/backtrace.rs:42:9 [INFO] [stdout] 9: 0x5614df80558f - std::panicking::default_hook::{{closure}}::h66aeee20dd470abb [INFO] [stdout] at /rustc/c2e32f1c9652b13ed99608599c1e855462f421f3/library/std/src/panicking.rs:301:27 [INFO] [stdout] 10: 0x5614df805421 - std::panicking::default_hook::h9d66b9642014ce48 [INFO] [stdout] at /rustc/c2e32f1c9652b13ed99608599c1e855462f421f3/library/std/src/panicking.rs:325:9 [INFO] [stdout] 11: 0x5614df7840ae - as core::ops::function::Fn>::call::h8c698701e444e564 [INFO] [stdout] at /rustc/c2e32f1c9652b13ed99608599c1e855462f421f3/library/alloc/src/boxed.rs:2099:9 [INFO] [stdout] 12: 0x5614df7840ae - test::test_main_with_exit_callback::{{closure}}::ha1c98e7b69c4defb [INFO] [stdout] at /rustc/c2e32f1c9652b13ed99608599c1e855462f421f3/library/test/src/lib.rs:145:21 [INFO] [stdout] 13: 0x5614df805c4f - as core::ops::function::Fn>::call::hc4f222a8a57c637a [INFO] [stdout] at /rustc/c2e32f1c9652b13ed99608599c1e855462f421f3/library/alloc/src/boxed.rs:2099:9 [INFO] [stdout] 14: 0x5614df805c4f - std::panicking::panic_with_hook::h6d5921a1a1fa5a8e [INFO] [stdout] at /rustc/c2e32f1c9652b13ed99608599c1e855462f421f3/library/std/src/panicking.rs:842:13 [INFO] [stdout] 15: 0x5614df8059fa - std::panicking::panic_handler::{{closure}}::hafeef6f707d43542 [INFO] [stdout] at /rustc/c2e32f1c9652b13ed99608599c1e855462f421f3/library/std/src/panicking.rs:707:13 [INFO] [stdout] 16: 0x5614df8008f9 - std::sys::backtrace::__rust_end_short_backtrace::h08cbc3319a3d0120 [INFO] [stdout] at /rustc/c2e32f1c9652b13ed99608599c1e855462f421f3/library/std/src/sys/backtrace.rs:174:18 [INFO] [stdout] 17: 0x5614df7e80fd - __rustc[ce5c411ff86ab1b2]::rust_begin_unwind [INFO] [stdout] at /rustc/c2e32f1c9652b13ed99608599c1e855462f421f3/library/std/src/panicking.rs:698:5 [INFO] [stdout] 18: 0x5614df8412d0 - core::panicking::panic_fmt::h774fb860369a0f7b [INFO] [stdout] at /rustc/c2e32f1c9652b13ed99608599c1e855462f421f3/library/core/src/panicking.rs:80:14 [INFO] [stdout] 19: 0x5614df8404d6 - core::result::unwrap_failed::h72ee8fcbf1bf8ff9 [INFO] [stdout] at /rustc/c2e32f1c9652b13ed99608599c1e855462f421f3/library/core/src/result.rs:1862:5 [INFO] [stdout] 20: 0x5614df749e68 - core::result::Result::expect::h1d68de59bf1a9850 [INFO] [stdout] at /rustc/c2e32f1c9652b13ed99608599c1e855462f421f3/library/core/src/result.rs:1185:23 [INFO] [stdout] 21: 0x5614df721ae8 - krakenuniq_rs::tests::test_classify_reads_api::hfe049b914ccbea93 [INFO] [stdout] at /opt/rustwide/workdir/src/lib.rs:222:14 [INFO] [stdout] 22: 0x5614df7225c7 - krakenuniq_rs::tests::test_classify_reads_api::{{closure}}::h973d3b6f1699221a [INFO] [stdout] at /opt/rustwide/workdir/src/lib.rs:219:33 [INFO] [stdout] 23: 0x5614df753af6 - core::ops::function::FnOnce::call_once::hcc13fe18ccaddf19 [INFO] [stdout] at /rustc/c2e32f1c9652b13ed99608599c1e855462f421f3/library/core/src/ops/function.rs:250:5 [INFO] [stdout] 24: 0x5614df783efb - core::ops::function::FnOnce::call_once::h4f6eabe90cccb47d [INFO] [stdout] at /rustc/c2e32f1c9652b13ed99608599c1e855462f421f3/library/core/src/ops/function.rs:250:5 [INFO] [stdout] 25: 0x5614df783efb - test::__rust_begin_short_backtrace::h94208530f2b4c8c7 [INFO] [stdout] at /rustc/c2e32f1c9652b13ed99608599c1e855462f421f3/library/test/src/lib.rs:663:18 [INFO] [stdout] 26: 0x5614df797f0d - test::run_test_in_process::{{closure}}::hbdc6a45a78c46404 [INFO] [stdout] at /rustc/c2e32f1c9652b13ed99608599c1e855462f421f3/library/test/src/lib.rs:686:74 [INFO] [stdout] 27: 0x5614df797f0d - as core::ops::function::FnOnce<()>>::call_once::h7f9d8efc7eedd165 [INFO] [stdout] at /rustc/c2e32f1c9652b13ed99608599c1e855462f421f3/library/core/src/panic/unwind_safe.rs:274:9 [INFO] [stdout] 28: 0x5614df797f0d - std::panicking::catch_unwind::do_call::he5edbaf126c13b99 [INFO] [stdout] at /rustc/c2e32f1c9652b13ed99608599c1e855462f421f3/library/std/src/panicking.rs:590:40 [INFO] [stdout] 29: 0x5614df797f0d - std::panicking::catch_unwind::h3d6a8652eceeabce [INFO] [stdout] at /rustc/c2e32f1c9652b13ed99608599c1e855462f421f3/library/std/src/panicking.rs:553:19 [INFO] [stdout] 30: 0x5614df797f0d - std::panic::catch_unwind::hbef0c501dd7bb498 [INFO] [stdout] at /rustc/c2e32f1c9652b13ed99608599c1e855462f421f3/library/std/src/panic.rs:359:14 [INFO] [stdout] 31: 0x5614df797f0d - test::run_test_in_process::h400008a46a5006a0 [INFO] [stdout] at /rustc/c2e32f1c9652b13ed99608599c1e855462f421f3/library/test/src/lib.rs:686:27 [INFO] [stdout] 32: 0x5614df797f0d - test::run_test::{{closure}}::h9a131655b31d9427 [INFO] [stdout] at /rustc/c2e32f1c9652b13ed99608599c1e855462f421f3/library/test/src/lib.rs:607:43 [INFO] [stdout] 33: 0x5614df771454 - test::run_test::{{closure}}::he4a7177c216308c0 [INFO] [stdout] at /rustc/c2e32f1c9652b13ed99608599c1e855462f421f3/library/test/src/lib.rs:637:41 [INFO] [stdout] 34: 0x5614df771454 - std::sys::backtrace::__rust_begin_short_backtrace::hd3980e9c55d6c539 [INFO] [stdout] at /rustc/c2e32f1c9652b13ed99608599c1e855462f421f3/library/std/src/sys/backtrace.rs:158:18 [INFO] [stdout] 35: 0x5614df774d8a - std::thread::Builder::spawn_unchecked_::{{closure}}::{{closure}}::h18552df67c7aa9b8 [INFO] [stdout] at /rustc/c2e32f1c9652b13ed99608599c1e855462f421f3/library/std/src/thread/mod.rs:562:17 [INFO] [stdout] 36: 0x5614df774d8a - as core::ops::function::FnOnce<()>>::call_once::h3d7b285234641a08 [INFO] [stdout] at /rustc/c2e32f1c9652b13ed99608599c1e855462f421f3/library/core/src/panic/unwind_safe.rs:274:9 [INFO] [stdout] 37: 0x5614df774d8a - std::panicking::catch_unwind::do_call::h5a2b5cf36528a5b2 [INFO] [stdout] at /rustc/c2e32f1c9652b13ed99608599c1e855462f421f3/library/std/src/panicking.rs:590:40 [INFO] [stdout] 38: 0x5614df774d8a - std::panicking::catch_unwind::h7e8b531bbda77d20 [INFO] [stdout] at /rustc/c2e32f1c9652b13ed99608599c1e855462f421f3/library/std/src/panicking.rs:553:19 [INFO] [stdout] 39: 0x5614df774d8a - std::panic::catch_unwind::hf9bbb2040b4f1e6c [INFO] [stdout] at /rustc/c2e32f1c9652b13ed99608599c1e855462f421f3/library/std/src/panic.rs:359:14 [INFO] [stdout] 40: 0x5614df774d8a - std::thread::Builder::spawn_unchecked_::{{closure}}::h600f92cf68549574 [INFO] [stdout] at /rustc/c2e32f1c9652b13ed99608599c1e855462f421f3/library/std/src/thread/mod.rs:560:30 [INFO] [stdout] 41: 0x5614df774d8a - core::ops::function::FnOnce::call_once{{vtable.shim}}::hb6607307df8a1847 [INFO] [stdout] at /rustc/c2e32f1c9652b13ed99608599c1e855462f421f3/library/core/src/ops/function.rs:250:5 [INFO] [stdout] 42: 0x5614df7fbcff - as core::ops::function::FnOnce>::call_once::h6891ad53a5ed6f52 [INFO] [stdout] at /rustc/c2e32f1c9652b13ed99608599c1e855462f421f3/library/alloc/src/boxed.rs:2085:9 [INFO] [stdout] 43: 0x5614df7fbcff - std::sys::thread::unix::Thread::new::thread_start::h7f3e77fa86df70af [INFO] [stdout] at /rustc/c2e32f1c9652b13ed99608599c1e855462f421f3/library/std/src/sys/thread/unix.rs:124:17 [INFO] [stdout] 44: 0x77d1d4225aa4 - [INFO] [stdout] 45: 0x77d1d42b2a64 - clone [INFO] [stdout] 46: 0x0 - [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] failures: [INFO] [stdout] tests::test_classify_reads_api [INFO] [stdout] [INFO] [stdout] test result: FAILED. 0 passed; 1 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.05s [INFO] [stdout] [INFO] [stderr] error: test failed, to rerun pass `--lib` [INFO] running `Command { std: "docker" "inspect" "7240274d6d5720a9ec37d2442f32ed32161842d90651b42ebbc004c7df3bebe2", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "7240274d6d5720a9ec37d2442f32ed32161842d90651b42ebbc004c7df3bebe2", kill_on_drop: false }` [INFO] [stdout] 7240274d6d5720a9ec37d2442f32ed32161842d90651b42ebbc004c7df3bebe2