[INFO] fetching crate hmm_tblout 0.4.23... [INFO] testing hmm_tblout-0.4.23 against try#c2e32f1c9652b13ed99608599c1e855462f421f3 for pr-146098-7 [INFO] extracting crate hmm_tblout 0.4.23 into /workspace/builds/worker-3-tc2/source [INFO] started tweaking crates.io crate hmm_tblout 0.4.23 [INFO] removed 0 missing examples [INFO] finished tweaking crates.io crate hmm_tblout 0.4.23 [INFO] tweaked toml for crates.io crate hmm_tblout 0.4.23 written to /workspace/builds/worker-3-tc2/source/Cargo.toml [INFO] validating manifest of crates.io crate hmm_tblout 0.4.23 on toolchain c2e32f1c9652b13ed99608599c1e855462f421f3 [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+c2e32f1c9652b13ed99608599c1e855462f421f3" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] crate crates.io crate hmm_tblout 0.4.23 already has a lockfile, it will not be regenerated [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+c2e32f1c9652b13ed99608599c1e855462f421f3" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:4848fb76d95f26979359cc7e45710b1dbc8f3acb7aeedee7c460d7702230f228" "/opt/rustwide/cargo-home/bin/cargo" "+c2e32f1c9652b13ed99608599c1e855462f421f3" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] da254f7fdf70945c4439439ede1979bc3be108c3cb3527dde392e1f4bbed7be4 [INFO] running `Command { std: "docker" "start" "-a" "da254f7fdf70945c4439439ede1979bc3be108c3cb3527dde392e1f4bbed7be4", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "da254f7fdf70945c4439439ede1979bc3be108c3cb3527dde392e1f4bbed7be4", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "da254f7fdf70945c4439439ede1979bc3be108c3cb3527dde392e1f4bbed7be4", kill_on_drop: false }` [INFO] [stdout] da254f7fdf70945c4439439ede1979bc3be108c3cb3527dde392e1f4bbed7be4 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:4848fb76d95f26979359cc7e45710b1dbc8f3acb7aeedee7c460d7702230f228" "/opt/rustwide/cargo-home/bin/cargo" "+c2e32f1c9652b13ed99608599c1e855462f421f3" "build" "--frozen" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] 283793a67fbd77473706f15b9a2e81cb51fae37adbcd05880c8fa566d604c3d5 [INFO] running `Command { std: "docker" "start" "-a" "283793a67fbd77473706f15b9a2e81cb51fae37adbcd05880c8fa566d604c3d5", kill_on_drop: false }` [INFO] [stderr] Compiling hmm_tblout v0.4.23 (/opt/rustwide/workdir) [INFO] [stdout] warning: hiding a lifetime that's elided elsewhere is confusing [INFO] [stdout] --> src/reader.rs:476:20 [INFO] [stdout] | [INFO] [stdout] 476 | pub fn records(&mut self) -> RecordsIter { [INFO] [stdout] | ^^^^^^^^^ ^^^^^^^^^^^^^^ the same lifetime is hidden here [INFO] [stdout] | | [INFO] [stdout] | the lifetime is elided here [INFO] [stdout] | [INFO] [stdout] = help: the same lifetime is referred to in inconsistent ways, making the signature confusing [INFO] [stdout] = note: `#[warn(mismatched_lifetime_syntaxes)]` on by default [INFO] [stdout] help: use `'_` for type paths [INFO] [stdout] | [INFO] [stdout] 476 | pub fn records(&mut self) -> RecordsIter<'_, R> { [INFO] [stdout] | +++ [INFO] [stdout] [INFO] [stdout] [INFO] [stderr] Finished `dev` profile [unoptimized + debuginfo] target(s) in 0.74s [INFO] running `Command { std: "docker" "inspect" "283793a67fbd77473706f15b9a2e81cb51fae37adbcd05880c8fa566d604c3d5", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "283793a67fbd77473706f15b9a2e81cb51fae37adbcd05880c8fa566d604c3d5", kill_on_drop: false }` [INFO] [stdout] 283793a67fbd77473706f15b9a2e81cb51fae37adbcd05880c8fa566d604c3d5 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:4848fb76d95f26979359cc7e45710b1dbc8f3acb7aeedee7c460d7702230f228" "/opt/rustwide/cargo-home/bin/cargo" "+c2e32f1c9652b13ed99608599c1e855462f421f3" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] 3d039a0cf255a7263fe12c0034ca9a1c01bdf2cc7d4c57920aff4f636b24f947 [INFO] running `Command { std: "docker" "start" "-a" "3d039a0cf255a7263fe12c0034ca9a1c01bdf2cc7d4c57920aff4f636b24f947", kill_on_drop: false }` [INFO] [stderr] Compiling hmm_tblout v0.4.23 (/opt/rustwide/workdir) [INFO] [stdout] warning: hiding a lifetime that's elided elsewhere is confusing [INFO] [stdout] --> src/reader.rs:476:20 [INFO] [stdout] | [INFO] [stdout] 476 | pub fn records(&mut self) -> RecordsIter { [INFO] [stdout] | ^^^^^^^^^ ^^^^^^^^^^^^^^ the same lifetime is hidden here [INFO] [stdout] | | [INFO] [stdout] | the lifetime is elided here [INFO] [stdout] | [INFO] [stdout] = help: the same lifetime is referred to in inconsistent ways, making the signature confusing [INFO] [stdout] = note: `#[warn(mismatched_lifetime_syntaxes)]` on by default [INFO] [stdout] help: use `'_` for type paths [INFO] [stdout] | [INFO] [stdout] 476 | pub fn records(&mut self) -> RecordsIter<'_, R> { [INFO] [stdout] | +++ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: constant `NHMMSCAN_FILE` is never used [INFO] [stdout] --> src/lib.rs:140:11 [INFO] [stdout] | [INFO] [stdout] 140 | const NHMMSCAN_FILE: &str = "# target name accession query name accession hmmfrom hmm to alifrom ali to env... [INFO] [stdout] | ^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(dead_code)]` (part of `#[warn(unused)]`) on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: constant `HMMSCAN_FILE` is never used [INFO] [stdout] --> src/lib.rs:161:11 [INFO] [stdout] | [INFO] [stdout] 161 | const HMMSCAN_FILE: &str = "# --- full sequence ---- --- best 1 d... [INFO] [stdout] | ^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: constant `HMMSEARCH_FILE` is never used [INFO] [stdout] --> src/lib.rs:189:11 [INFO] [stdout] | [INFO] [stdout] 189 | const HMMSEARCH_FILE: &str = "# --- full sequence ---- --- best 1... [INFO] [stdout] | ^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: hiding a lifetime that's elided elsewhere is confusing [INFO] [stdout] --> src/reader.rs:476:20 [INFO] [stdout] | [INFO] [stdout] 476 | pub fn records(&mut self) -> RecordsIter { [INFO] [stdout] | ^^^^^^^^^ ^^^^^^^^^^^^^^ the same lifetime is hidden here [INFO] [stdout] | | [INFO] [stdout] | the lifetime is elided here [INFO] [stdout] | [INFO] [stdout] = help: the same lifetime is referred to in inconsistent ways, making the signature confusing [INFO] [stdout] = note: `#[warn(mismatched_lifetime_syntaxes)]` on by default [INFO] [stdout] help: use `'_` for type paths [INFO] [stdout] | [INFO] [stdout] 476 | pub fn records(&mut self) -> RecordsIter<'_, R> { [INFO] [stdout] | +++ [INFO] [stdout] [INFO] [stdout] [INFO] [stderr] Finished `test` profile [unoptimized + debuginfo] target(s) in 1.06s [INFO] running `Command { std: "docker" "inspect" "3d039a0cf255a7263fe12c0034ca9a1c01bdf2cc7d4c57920aff4f636b24f947", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "3d039a0cf255a7263fe12c0034ca9a1c01bdf2cc7d4c57920aff4f636b24f947", kill_on_drop: false }` [INFO] [stdout] 3d039a0cf255a7263fe12c0034ca9a1c01bdf2cc7d4c57920aff4f636b24f947 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:4848fb76d95f26979359cc7e45710b1dbc8f3acb7aeedee7c460d7702230f228" "/opt/rustwide/cargo-home/bin/cargo" "+c2e32f1c9652b13ed99608599c1e855462f421f3" "test" "--frozen", kill_on_drop: false }` [INFO] [stdout] 80ae0a971ba6ba1975e025313d4f44a30fe433e3de0d59e93d8ab94fde67785e [INFO] running `Command { std: "docker" "start" "-a" "80ae0a971ba6ba1975e025313d4f44a30fe433e3de0d59e93d8ab94fde67785e", kill_on_drop: false }` [INFO] [stderr] warning: hiding a lifetime that's elided elsewhere is confusing [INFO] [stderr] --> src/reader.rs:476:20 [INFO] [stderr] | [INFO] [stderr] 476 | pub fn records(&mut self) -> RecordsIter { [INFO] [stderr] | ^^^^^^^^^ ^^^^^^^^^^^^^^ the same lifetime is hidden here [INFO] [stderr] | | [INFO] [stderr] | the lifetime is elided here [INFO] [stderr] | [INFO] [stderr] = help: the same lifetime is referred to in inconsistent ways, making the signature confusing [INFO] [stderr] = note: `#[warn(mismatched_lifetime_syntaxes)]` on by default [INFO] [stderr] help: use `'_` for type paths [INFO] [stderr] | [INFO] [stderr] 476 | pub fn records(&mut self) -> RecordsIter<'_, R> { [INFO] [stderr] | +++ [INFO] [stderr] [INFO] [stderr] warning: `hmm_tblout` (lib) generated 1 warning (run `cargo fix --lib -p hmm_tblout` to apply 1 suggestion) [INFO] [stderr] warning: constant `NHMMSCAN_FILE` is never used [INFO] [stderr] --> src/lib.rs:140:11 [INFO] [stderr] | [INFO] [stderr] 140 | const NHMMSCAN_FILE: &str = "# target name accession query name accession hmmfrom hmm to alifrom ali to env... [INFO] [stderr] | ^^^^^^^^^^^^^ [INFO] [stderr] | [INFO] [stderr] = note: `#[warn(dead_code)]` (part of `#[warn(unused)]`) on by default [INFO] [stderr] [INFO] [stdout] [INFO] [stderr] warning: constant `HMMSCAN_FILE` is never used [INFO] [stdout] running 10 tests [INFO] [stderr] --> src/lib.rs:161:11 [INFO] [stderr] | [INFO] [stderr] 161 | const HMMSCAN_FILE: &str = "# --- full sequence ---- --- best 1 d... [INFO] [stderr] | ^^^^^^^^^^^^ [INFO] [stderr] [INFO] [stderr] warning: constant `HMMSEARCH_FILE` is never used [INFO] [stderr] --> src/lib.rs:189:11 [INFO] [stderr] | [INFO] [stderr] 189 | const HMMSEARCH_FILE: &str = "# --- full sequence ---- --- best 1... [INFO] [stderr] | ^^^^^^^^^^^^^^ [INFO] [stderr] [INFO] [stderr] warning: `hmm_tblout` (lib test) generated 4 warnings (1 duplicate) [INFO] [stderr] Finished `test` profile [unoptimized + debuginfo] target(s) in 0.02s [INFO] [stderr] Running unittests src/lib.rs (/opt/rustwide/target/debug/deps/hmm_tblout-8a0efce9e16691c1) [INFO] [stdout] test tests::test_cmscan ... ok [INFO] [stdout] test tests::test_header ... ok [INFO] [stdout] test tests::test_meta ... ok [INFO] [stdout] test tests::test_phmmer_records ... ok [INFO] [stdout] test tests::test_jackhmmer_meta ... ok [INFO] [stdout] test tests::test_whole_file ... ok [INFO] [stdout] test tests::test_jackhmmer_records ... ok [INFO] [stdout] test tests::in_same_as_out ... FAILED [INFO] [stdout] test tests::in_same_as_out_n ... FAILED [INFO] [stdout] test tests::test_phmmer_write ... FAILED [INFO] [stdout] [INFO] [stdout] failures: [INFO] [stdout] [INFO] [stdout] ---- tests::in_same_as_out stdout ---- [INFO] [stdout] [INFO] [stdout] thread 'tests::in_same_as_out' (24) panicked at src/lib.rs:327:9: [INFO] [stdout] assertion `left == right` failed [INFO] [stdout] left: "# --- full sequence ---- --- best 1 domain ---- --- domain number estimation ----\n# target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target\n#------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- ---------------------\nHBB_HUMAN - MYG_ESCGI - 2.3e-11 30.3 0.1 2.5e-11 30.2 0.1 1.0 1 0 0 1 1 1 1 Human beta hemoglobin.\nHBB_HUMAN - MYG_HORSE - 5.1e-12 32.3 0.1 6.1e-12 32.1 0.1 1.0 1 0 0 1 1 1 1 Human beta hemoglobin.\nHBB_HUMAN - MYG_PROGU - 9.3e-13 34.6 0 1.1e-12 34.4 0 1.0 1 0 0 1 1 1 1 Human beta hemoglobin.\nHBB_HUMAN - MYG_SAISC - 7.4e-13 35.1 0 8e-13 35 0 1.0 1 0 0 1 1 1 1 Human beta hemoglobin.\nHBB_HUMAN - HBB_LARRI - 0e0 222.2 0.1 0e0 222 0.1 1.0 1 0 0 1 1 1 1 Human beta hemoglobin.\nHBB_HUMAN - HBB1_VAREX - 0e0 210.6 0.2 0e0 210.5 0.2 1.0 1 0 0 1 1 1 1 Human beta hemoglobin.\nHBB_HUMAN - HBB2_XENTR - 0e0 163.9 0.1 0e0 163.7 0.1 1.0 1 0 0 1 1 1 1 Human beta hemoglobin.\nHBB_HUMAN - HBBL_RANCA - 0e0 180 0.1 0e0 179.9 0.1 1.0 1 0 0 1 1 1 1 Human beta hemoglobin.\nHBB_HUMAN - HBB2_TRICR - 0e0 143 0 0e0 142.8 0 1.0 1 0 0 1 1 1 1 Human beta hemoglobin.\n#\n# Program: phmmer\n# Version: 3.2 (June 2018)\n# Pipeline mode: SEARCH\n# Query file: /var/lib/cwl/stgc72dd3bc-8891-4b83-83e7-215178692be8/globins45.fa\n# Target file: /var/lib/cwl/stgf46f4fb0-f7ec-4fbf-b608-74ca6d8a20a0/HBB_HUMAN\n# Options: phmmer -o globins45.fa.phmmer_matches.out --tblout globins45.fa.phmmer_matches.tblout /var/lib/cwl/stgc72dd3bc-8891-4b83-83e7-215178692be8/globins45.fa /var/lib/cwl/stgf46f4fb0-f7ec-4fbf-b608-74ca6d8a20a0/HBB_HUMAN\n# Current dir: /tmp/cwl\n# Date: Tue Jul 17 13:01:19 2018\n# [ok]" [INFO] [stdout] right: "# --- full sequence ---- --- best 1 domain ---- --- domain number estimation ----\n# target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target\n#------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- ---------------------\nHBB_HUMAN - MYG_ESCGI - 2.3e-11 30.3 0.1 2.5e-11 30.2 0.1 1.0 1 0 0 1 1 1 1 Human beta hemoglobin.\nHBB_HUMAN - MYG_HORSE - 5.1e-12 32.3 0.1 6.1e-12 32.1 0.1 1.0 1 0 0 1 1 1 1 Human beta hemoglobin.\nHBB_HUMAN - MYG_PROGU - 9.3e-13 34.6 0.0 1.1e-12 34.4 0.0 1.0 1 0 0 1 1 1 1 Human beta hemoglobin.\nHBB_HUMAN - MYG_SAISC - 7.4e-13 35.1 0.0 8e-13 35.0 0.0 1.0 1 0 0 1 1 1 1 Human beta hemoglobin.\nHBB_HUMAN - HBB_LARRI - 1.5e-70 222.2 0.1 1.6e-70 222.0 0.1 1.0 1 0 0 1 1 1 1 Human beta hemoglobin.\nHBB_HUMAN - HBB1_VAREX - 7e-67 210.6 0.2 7.7e-67 210.5 0.2 1.0 1 0 0 1 1 1 1 Human beta hemoglobin.\nHBB_HUMAN - HBB2_XENTR - 1.2e-52 163.9 0.1 1.4e-52 163.7 0.1 1.0 1 0 0 1 1 1 1 Human beta hemoglobin.\nHBB_HUMAN - HBBL_RANCA - 1.5e-57 180.0 0.1 1.7e-57 179.9 0.1 1.0 1 0 0 1 1 1 1 Human beta hemoglobin.\nHBB_HUMAN - HBB2_TRICR - 3.4e-46 143.0 0.0 3.7e-46 142.8 0.0 1.0 1 0 0 1 1 1 1 Human beta hemoglobin.\n#\n# Program: phmmer\n# Version: 3.2 (June 2018)\n# Pipeline mode: SEARCH\n# Query file: /var/lib/cwl/stgc72dd3bc-8891-4b83-83e7-215178692be8/globins45.fa\n# Target file: /var/lib/cwl/stgf46f4fb0-f7ec-4fbf-b608-74ca6d8a20a0/HBB_HUMAN\n# Option settings: phmmer -o globins45.fa.phmmer_matches.out --tblout globins45.fa.phmmer_matches.tblout /var/lib/cwl/stgc72dd3bc-8891-4b83-83e7-215178692be8/globins45.fa /var/lib/cwl/stgf46f4fb0-f7ec-4fbf-b608-74ca6d8a20a0/HBB_HUMAN \n# Current dir: /tmp/cwl\n# Date: Tue Jul 17 13:01:19 2018\n# [ok]" [INFO] [stdout] stack backtrace: [INFO] [stdout] 0: 0x5bf75d64da32 - std::backtrace_rs::backtrace::libunwind::trace::h9ea1e07ac77a25d7 [INFO] [stdout] at /rustc/c2e32f1c9652b13ed99608599c1e855462f421f3/library/std/src/../../backtrace/src/backtrace/libunwind.rs:117:9 [INFO] [stdout] 1: 0x5bf75d64da32 - std::backtrace_rs::backtrace::trace_unsynchronized::h72b75eb83b53d15a [INFO] [stdout] at /rustc/c2e32f1c9652b13ed99608599c1e855462f421f3/library/std/src/../../backtrace/src/backtrace/mod.rs:66:14 [INFO] [stdout] 2: 0x5bf75d64da32 - std::sys::backtrace::_print_fmt::h255777b7ec902439 [INFO] [stdout] at /rustc/c2e32f1c9652b13ed99608599c1e855462f421f3/library/std/src/sys/backtrace.rs:66:9 [INFO] [stdout] 3: 0x5bf75d64da32 - ::fmt::h8a1ac49fcd7ee8ce [INFO] [stdout] at /rustc/c2e32f1c9652b13ed99608599c1e855462f421f3/library/std/src/sys/backtrace.rs:39:26 [INFO] [stdout] 4: 0x5bf75d65ea0f - core::fmt::rt::Argument::fmt::h635cbf3c6754cc90 [INFO] [stdout] at /rustc/c2e32f1c9652b13ed99608599c1e855462f421f3/library/core/src/fmt/rt.rs:173:76 [INFO] [stdout] 5: 0x5bf75d65ea0f - core::fmt::write::hbdcc0ec4f1bab1db [INFO] [stdout] at /rustc/c2e32f1c9652b13ed99608599c1e855462f421f3/library/core/src/fmt/mod.rs:1469:25 [INFO] [stdout] 6: 0x5bf75d61b383 - std::io::default_write_fmt::h2580ece0d4b58e51 [INFO] [stdout] at /rustc/c2e32f1c9652b13ed99608599c1e855462f421f3/library/std/src/io/mod.rs:639:11 [INFO] [stdout] 7: 0x5bf75d61b383 - std::io::Write::write_fmt::hac9e42858f273b87 [INFO] [stdout] at /rustc/c2e32f1c9652b13ed99608599c1e855462f421f3/library/std/src/io/mod.rs:1954:13 [INFO] [stdout] 8: 0x5bf75d627292 - std::sys::backtrace::BacktraceLock::print::h052febbd86f7bf07 [INFO] [stdout] at /rustc/c2e32f1c9652b13ed99608599c1e855462f421f3/library/std/src/sys/backtrace.rs:42:9 [INFO] [stdout] 9: 0x5bf75d62bd6f - std::panicking::default_hook::{{closure}}::h66aeee20dd470abb [INFO] [stdout] at /rustc/c2e32f1c9652b13ed99608599c1e855462f421f3/library/std/src/panicking.rs:301:27 [INFO] [stdout] 10: 0x5bf75d62bc01 - std::panicking::default_hook::h9d66b9642014ce48 [INFO] [stdout] at /rustc/c2e32f1c9652b13ed99608599c1e855462f421f3/library/std/src/panicking.rs:325:9 [INFO] [stdout] 11: 0x5bf75d5eed2e - as core::ops::function::Fn>::call::h8c698701e444e564 [INFO] [stdout] at /rustc/c2e32f1c9652b13ed99608599c1e855462f421f3/library/alloc/src/boxed.rs:2099:9 [INFO] [stdout] 12: 0x5bf75d5eed2e - test::test_main_with_exit_callback::{{closure}}::ha1c98e7b69c4defb [INFO] [stdout] at /rustc/c2e32f1c9652b13ed99608599c1e855462f421f3/library/test/src/lib.rs:145:21 [INFO] [stdout] 13: 0x5bf75d62c37f - as core::ops::function::Fn>::call::hc4f222a8a57c637a [INFO] [stdout] at /rustc/c2e32f1c9652b13ed99608599c1e855462f421f3/library/alloc/src/boxed.rs:2099:9 [INFO] [stdout] 14: 0x5bf75d62c37f - std::panicking::panic_with_hook::h6d5921a1a1fa5a8e [INFO] [stdout] at /rustc/c2e32f1c9652b13ed99608599c1e855462f421f3/library/std/src/panicking.rs:842:13 [INFO] [stdout] 15: 0x5bf75d62c1da - std::panicking::panic_handler::{{closure}}::hafeef6f707d43542 [INFO] [stdout] at /rustc/c2e32f1c9652b13ed99608599c1e855462f421f3/library/std/src/panicking.rs:707:13 [INFO] [stdout] 16: 0x5bf75d6273c9 - std::sys::backtrace::__rust_end_short_backtrace::h08cbc3319a3d0120 [INFO] [stdout] at /rustc/c2e32f1c9652b13ed99608599c1e855462f421f3/library/std/src/sys/backtrace.rs:174:18 [INFO] [stdout] 17: 0x5bf75d60fc1d - __rustc[ce5c411ff86ab1b2]::rust_begin_unwind [INFO] [stdout] at /rustc/c2e32f1c9652b13ed99608599c1e855462f421f3/library/std/src/panicking.rs:698:5 [INFO] [stdout] 18: 0x5bf75d667a20 - core::panicking::panic_fmt::h774fb860369a0f7b [INFO] [stdout] at /rustc/c2e32f1c9652b13ed99608599c1e855462f421f3/library/core/src/panicking.rs:80:14 [INFO] [stdout] 19: 0x5bf75d667823 - core::panicking::assert_failed_inner::hbdde3a71af798a31 [INFO] [stdout] at /rustc/c2e32f1c9652b13ed99608599c1e855462f421f3/library/core/src/panicking.rs:444:17 [INFO] [stdout] 20: 0x5bf75d5b0f0e - core::panicking::assert_failed::h56d756667c3f9532 [INFO] [stdout] at /rustc/c2e32f1c9652b13ed99608599c1e855462f421f3/library/core/src/panicking.rs:399:5 [INFO] [stdout] 21: 0x5bf75d5c0685 - hmm_tblout::tests::in_same_as_out::h378acc8a7ac184ad [INFO] [stdout] at /opt/rustwide/workdir/src/lib.rs:327:9 [INFO] [stdout] 22: 0x5bf75d5c0857 - hmm_tblout::tests::in_same_as_out::{{closure}}::h6fe4bad71ce2a074 [INFO] [stdout] at /opt/rustwide/workdir/src/lib.rs:309:24 [INFO] [stdout] 23: 0x5bf75d5c66f6 - core::ops::function::FnOnce::call_once::h4e098d2c840ff78b [INFO] [stdout] at /rustc/c2e32f1c9652b13ed99608599c1e855462f421f3/library/core/src/ops/function.rs:250:5 [INFO] [stdout] 24: 0x5bf75d5eeb7b - core::ops::function::FnOnce::call_once::h4f6eabe90cccb47d [INFO] [stdout] at /rustc/c2e32f1c9652b13ed99608599c1e855462f421f3/library/core/src/ops/function.rs:250:5 [INFO] [stdout] 25: 0x5bf75d5eeb7b - test::__rust_begin_short_backtrace::h94208530f2b4c8c7 [INFO] [stdout] at /rustc/c2e32f1c9652b13ed99608599c1e855462f421f3/library/test/src/lib.rs:663:18 [INFO] [stdout] 26: 0x5bf75d602b8d - test::run_test_in_process::{{closure}}::hbdc6a45a78c46404 [INFO] [stdout] at /rustc/c2e32f1c9652b13ed99608599c1e855462f421f3/library/test/src/lib.rs:686:74 [INFO] [stdout] 27: 0x5bf75d602b8d - as core::ops::function::FnOnce<()>>::call_once::h7f9d8efc7eedd165 [INFO] [stdout] at /rustc/c2e32f1c9652b13ed99608599c1e855462f421f3/library/core/src/panic/unwind_safe.rs:274:9 [INFO] [stdout] 28: 0x5bf75d602b8d - std::panicking::catch_unwind::do_call::he5edbaf126c13b99 [INFO] [stdout] at /rustc/c2e32f1c9652b13ed99608599c1e855462f421f3/library/std/src/panicking.rs:590:40 [INFO] [stdout] 29: 0x5bf75d602b8d - std::panicking::catch_unwind::h3d6a8652eceeabce [INFO] [stdout] at /rustc/c2e32f1c9652b13ed99608599c1e855462f421f3/library/std/src/panicking.rs:553:19 [INFO] [stdout] 30: 0x5bf75d602b8d - std::panic::catch_unwind::hbef0c501dd7bb498 [INFO] [stdout] at /rustc/c2e32f1c9652b13ed99608599c1e855462f421f3/library/std/src/panic.rs:359:14 [INFO] [stdout] 31: 0x5bf75d602b8d - test::run_test_in_process::h400008a46a5006a0 [INFO] [stdout] at /rustc/c2e32f1c9652b13ed99608599c1e855462f421f3/library/test/src/lib.rs:686:27 [INFO] [stdout] 32: 0x5bf75d602b8d - test::run_test::{{closure}}::h9a131655b31d9427 [INFO] [stdout] at /rustc/c2e32f1c9652b13ed99608599c1e855462f421f3/library/test/src/lib.rs:607:43 [INFO] [stdout] 33: 0x5bf75d5dc0d4 - test::run_test::{{closure}}::he4a7177c216308c0 [INFO] [stdout] at /rustc/c2e32f1c9652b13ed99608599c1e855462f421f3/library/test/src/lib.rs:637:41 [INFO] [stdout] 34: 0x5bf75d5dc0d4 - std::sys::backtrace::__rust_begin_short_backtrace::hd3980e9c55d6c539 [INFO] [stdout] at /rustc/c2e32f1c9652b13ed99608599c1e855462f421f3/library/std/src/sys/backtrace.rs:158:18 [INFO] [stdout] 35: 0x5bf75d5dfa0a - std::thread::Builder::spawn_unchecked_::{{closure}}::{{closure}}::h18552df67c7aa9b8 [INFO] [stdout] at /rustc/c2e32f1c9652b13ed99608599c1e855462f421f3/library/std/src/thread/mod.rs:562:17 [INFO] [stdout] 36: 0x5bf75d5dfa0a - as core::ops::function::FnOnce<()>>::call_once::h3d7b285234641a08 [INFO] [stdout] at /rustc/c2e32f1c9652b13ed99608599c1e855462f421f3/library/core/src/panic/unwind_safe.rs:274:9 [INFO] [stdout] 37: 0x5bf75d5dfa0a - std::panicking::catch_unwind::do_call::h5a2b5cf36528a5b2 [INFO] [stdout] at /rustc/c2e32f1c9652b13ed99608599c1e855462f421f3/library/std/src/panicking.rs:590:40 [INFO] [stdout] 38: 0x5bf75d5dfa0a - std::panicking::catch_unwind::h7e8b531bbda77d20 [INFO] [stdout] at /rustc/c2e32f1c9652b13ed99608599c1e855462f421f3/library/std/src/panicking.rs:553:19 [INFO] [stdout] 39: 0x5bf75d5dfa0a - std::panic::catch_unwind::hf9bbb2040b4f1e6c [INFO] [stdout] at /rustc/c2e32f1c9652b13ed99608599c1e855462f421f3/library/std/src/panic.rs:359:14 [INFO] [stdout] 40: 0x5bf75d5dfa0a - std::thread::Builder::spawn_unchecked_::{{closure}}::h600f92cf68549574 [INFO] [stdout] at /rustc/c2e32f1c9652b13ed99608599c1e855462f421f3/library/std/src/thread/mod.rs:560:30 [INFO] [stdout] 41: 0x5bf75d5dfa0a - core::ops::function::FnOnce::call_once{{vtable.shim}}::hb6607307df8a1847 [INFO] [stdout] at /rustc/c2e32f1c9652b13ed99608599c1e855462f421f3/library/core/src/ops/function.rs:250:5 [INFO] [stdout] 42: 0x5bf75d6227cf - as core::ops::function::FnOnce>::call_once::h6891ad53a5ed6f52 [INFO] [stdout] at /rustc/c2e32f1c9652b13ed99608599c1e855462f421f3/library/alloc/src/boxed.rs:2085:9 [INFO] [stdout] 43: 0x5bf75d6227cf - std::sys::thread::unix::Thread::new::thread_start::h7f3e77fa86df70af [INFO] [stdout] at /rustc/c2e32f1c9652b13ed99608599c1e855462f421f3/library/std/src/sys/thread/unix.rs:124:17 [INFO] [stdout] 44: 0x7796843edaa4 - [INFO] [stdout] 45: 0x77968447aa64 - clone [INFO] [stdout] 46: 0x0 - [INFO] [stdout] [INFO] [stdout] ---- tests::in_same_as_out_n stdout ---- [INFO] [stdout] [INFO] [stdout] thread 'tests::in_same_as_out_n' (25) panicked at src/lib.rs:353:9: [INFO] [stdout] assertion `left == right` failed [INFO] [stdout] left: "# target name accession query name accession hmmfrom hmm to alifrom ali to envfrom env to sq len strand E-value score bias description of target\n#------------------- ---------- -------------------- ---------- ------- ------- ------- ------- ------- ------- ------- ------ --------- ------ ----- ---------------------\nSUPER_1 - TR - 1 315 10988331 10987997 10988331 10987995 52766903 - 6.5e-34 124.1 1.2 - \nSUPER_3 - TR - 139 204 17951382 17951472 17951359 17951492 49366223 + 7.4e-1 15.6 3 - \nSUPER_4 - TR - 29 130 20542008 20542119 20541989 20542141 47284787 + 1.1e0 15.1 5.7 - \nSUPER_4 - TR - 29 126 32993383 32993283 32993398 32993263 47284787 - 2.2e0 14.1 1 - \nSUPER_4 - TR - 23 126 14861076 14861174 14861063 14861195 47284787 + 2.4e0 13.9 3.4 - \nSUPER_5 - TR - 21 126 27641355 27641256 27641369 27641229 46997258 - 2.5e0 13.8 6.5 - \nSUPER_8 - TR - 158 191 33162494 33162454 33162514 33162446 33878543 - 3.1e0 13.6 2 - \nSUPER_5 - TR - 107 162 46228956 46228885 46228975 46228876 46997258 - 3.1e0 13.6 0 - \nSUPER_1 - TR - 68 173 15697438 15697327 15697464 15697325 52766903 - 4.4e0 13.1 0.7 - \nSUPER_3 - TR - 24 128 36147201 36147098 36147221 36147078 49366223 - 4.5e0 13 1.9 - \nSUPER_1 - TR - 1 84 36988055 36987966 36988055 36987944 52766903 - 4.7e0 13 2.1 - \nSUPER_6 - TR - 38 122 20863320 20863225 20863338 20863202 43664244 - 5e0 12.9 2.2 - \nSUPER_8 - TR - 1 79 32349659 32349576 32349659 32349556 33878543 - 5.9e0 12.6 2.5 - \nSUPER_2 - TR - 22 128 38320620 38320502 38320631 38320480 52745556 - 6.5e0 12.5 0 - \nSUPER_1 - TR - 2 55 1602497 1602446 1602498 1602420 52766903 - 8.6e0 12.1 7.2 - \nSUPER_2 - TR - 2 100 26735237 26735139 26735238 26735122 52745556 - 9e0 12 1.4 - \n#\n# Program: nhmmer\n# Version: 3.4 (Aug 2023)\n# Pipeline mode: SEARCH\n# Query file: TR.hmm\n# Target file: /lustre/scratch124/tol/projects/darwin/data/dicots/Misopates_orontium/assembly/curated/daMisOron1.1/daMisOron1.1.primary.fa.gz\n# Options: /software/team301/hmmer-3.4/src/nhmmer --tblout Misopates_orontium.tbl --dna --cpu 10 TR.hmm /lustre/scratch124/tol/projects/darwin/data/dicots/Misopates_orontium/assembly/curated/daMisOron1.1/daMisOron1.1.primary.fa.gz\n# Current dir: /lustre/scratch123/tol/teams/blaxter/users/mb39/ARU/tr_detection\n# Date: Fri May 3 10:07:36 2024\n# [ok]" [INFO] [stdout] right: "# target name accession query name accession hmmfrom hmm to alifrom ali to envfrom env to sq len strand E-value score bias description of target\n#------------------- ---------- -------------------- ---------- ------- ------- ------- ------- ------- ------- ------- ------ --------- ------ ----- ---------------------\nSUPER_1 - TR - 1 315 10988331 10987997 10988331 10987995 52766903 - 6.5e-34 124.1 1.2 -\nSUPER_3 - TR - 139 204 17951382 17951472 17951359 17951492 49366223 + 0.74 15.6 3.0 -\nSUPER_4 - TR - 29 130 20542008 20542119 20541989 20542141 47284787 + 1.1 15.1 5.7 -\nSUPER_4 - TR - 29 126 32993383 32993283 32993398 32993263 47284787 - 2.2 14.1 1.0 -\nSUPER_4 - TR - 23 126 14861076 14861174 14861063 14861195 47284787 + 2.4 13.9 3.4 -\nSUPER_5 - TR - 21 126 27641355 27641256 27641369 27641229 46997258 - 2.5 13.8 6.5 -\nSUPER_8 - TR - 158 191 33162494 33162454 33162514 33162446 33878543 - 3.1 13.6 2.0 -\nSUPER_5 - TR - 107 162 46228956 46228885 46228975 46228876 46997258 - 3.1 13.6 0.0 -\nSUPER_1 - TR - 68 173 15697438 15697327 15697464 15697325 52766903 - 4.4 13.1 0.7 -\nSUPER_3 - TR - 24 128 36147201 36147098 36147221 36147078 49366223 - 4.5 13.0 1.9 -\nSUPER_1 - TR - 1 84 36988055 36987966 36988055 36987944 52766903 - 4.7 13.0 2.1 -\nSUPER_6 - TR - 38 122 20863320 20863225 20863338 20863202 43664244 - 5 12.9 2.2 -\nSUPER_8 - TR - 1 79 32349659 32349576 32349659 32349556 33878543 - 5.9 12.6 2.5 -\nSUPER_2 - TR - 22 128 38320620 38320502 38320631 38320480 52745556 - 6.5 12.5 0.0 -\nSUPER_1 - TR - 2 55 1602497 1602446 1602498 1602420 52766903 - 8.6 12.1 7.2 -\nSUPER_2 - TR - 2 100 26735237 26735139 26735238 26735122 52745556 - 9 12.0 1.4 -\n#\n# Program: nhmmer\n# Version: 3.4 (Aug 2023)\n# Pipeline mode: SEARCH\n# Query file: TR.hmm\n# Target file: /lustre/scratch124/tol/projects/darwin/data/dicots/Misopates_orontium/assembly/curated/daMisOron1.1/daMisOron1.1.primary.fa.gz\n# Option settings: /software/team301/hmmer-3.4/src/nhmmer --tblout Misopates_orontium.tbl --dna --cpu 10 TR.hmm /lustre/scratch124/tol/projects/darwin/data/dicots/Misopates_orontium/assembly/curated/daMisOron1.1/daMisOron1.1.primary.fa.gz\n# Current dir: /lustre/scratch123/tol/teams/blaxter/users/mb39/ARU/tr_detection\n# Date: Fri May 3 10:07:36 2024\n# [ok]" [INFO] [stdout] stack backtrace: [INFO] [stdout] 0: 0x5bf75d64da32 - std::backtrace_rs::backtrace::libunwind::trace::h9ea1e07ac77a25d7 [INFO] [stdout] at /rustc/c2e32f1c9652b13ed99608599c1e855462f421f3/library/std/src/../../backtrace/src/backtrace/libunwind.rs:117:9 [INFO] [stdout] 1: 0x5bf75d64da32 - std::backtrace_rs::backtrace::trace_unsynchronized::h72b75eb83b53d15a [INFO] [stdout] at /rustc/c2e32f1c9652b13ed99608599c1e855462f421f3/library/std/src/../../backtrace/src/backtrace/mod.rs:66:14 [INFO] [stdout] 2: 0x5bf75d64da32 - std::sys::backtrace::_print_fmt::h255777b7ec902439 [INFO] [stdout] at /rustc/c2e32f1c9652b13ed99608599c1e855462f421f3/library/std/src/sys/backtrace.rs:66:9 [INFO] [stdout] 3: 0x5bf75d64da32 - ::fmt::h8a1ac49fcd7ee8ce [INFO] [stdout] at /rustc/c2e32f1c9652b13ed99608599c1e855462f421f3/library/std/src/sys/backtrace.rs:39:26 [INFO] [stdout] 4: 0x5bf75d65ea0f - core::fmt::rt::Argument::fmt::h635cbf3c6754cc90 [INFO] [stdout] at /rustc/c2e32f1c9652b13ed99608599c1e855462f421f3/library/core/src/fmt/rt.rs:173:76 [INFO] [stdout] 5: 0x5bf75d65ea0f - core::fmt::write::hbdcc0ec4f1bab1db [INFO] [stdout] at /rustc/c2e32f1c9652b13ed99608599c1e855462f421f3/library/core/src/fmt/mod.rs:1469:25 [INFO] [stdout] 6: 0x5bf75d61b383 - std::io::default_write_fmt::h2580ece0d4b58e51 [INFO] [stdout] at /rustc/c2e32f1c9652b13ed99608599c1e855462f421f3/library/std/src/io/mod.rs:639:11 [INFO] [stdout] 7: 0x5bf75d61b383 - std::io::Write::write_fmt::hac9e42858f273b87 [INFO] [stdout] at /rustc/c2e32f1c9652b13ed99608599c1e855462f421f3/library/std/src/io/mod.rs:1954:13 [INFO] [stdout] 8: 0x5bf75d627292 - std::sys::backtrace::BacktraceLock::print::h052febbd86f7bf07 [INFO] [stdout] at /rustc/c2e32f1c9652b13ed99608599c1e855462f421f3/library/std/src/sys/backtrace.rs:42:9 [INFO] [stdout] 9: 0x5bf75d62bd6f - std::panicking::default_hook::{{closure}}::h66aeee20dd470abb [INFO] [stdout] at /rustc/c2e32f1c9652b13ed99608599c1e855462f421f3/library/std/src/panicking.rs:301:27 [INFO] [stdout] 10: 0x5bf75d62bc01 - std::panicking::default_hook::h9d66b9642014ce48 [INFO] [stdout] at /rustc/c2e32f1c9652b13ed99608599c1e855462f421f3/library/std/src/panicking.rs:325:9 [INFO] [stdout] 11: 0x5bf75d5eed2e - as core::ops::function::Fn>::call::h8c698701e444e564 [INFO] [stdout] at /rustc/c2e32f1c9652b13ed99608599c1e855462f421f3/library/alloc/src/boxed.rs:2099:9 [INFO] [stdout] 12: 0x5bf75d5eed2e - test::test_main_with_exit_callback::{{closure}}::ha1c98e7b69c4defb [INFO] [stdout] at /rustc/c2e32f1c9652b13ed99608599c1e855462f421f3/library/test/src/lib.rs:145:21 [INFO] [stdout] 13: 0x5bf75d62c37f - as core::ops::function::Fn>::call::hc4f222a8a57c637a [INFO] [stdout] at /rustc/c2e32f1c9652b13ed99608599c1e855462f421f3/library/alloc/src/boxed.rs:2099:9 [INFO] [stdout] 14: 0x5bf75d62c37f - std::panicking::panic_with_hook::h6d5921a1a1fa5a8e [INFO] [stdout] at /rustc/c2e32f1c9652b13ed99608599c1e855462f421f3/library/std/src/panicking.rs:842:13 [INFO] [stdout] 15: 0x5bf75d62c1da - std::panicking::panic_handler::{{closure}}::hafeef6f707d43542 [INFO] [stdout] at /rustc/c2e32f1c9652b13ed99608599c1e855462f421f3/library/std/src/panicking.rs:707:13 [INFO] [stdout] 16: 0x5bf75d6273c9 - std::sys::backtrace::__rust_end_short_backtrace::h08cbc3319a3d0120 [INFO] [stdout] at /rustc/c2e32f1c9652b13ed99608599c1e855462f421f3/library/std/src/sys/backtrace.rs:174:18 [INFO] [stdout] 17: 0x5bf75d60fc1d - __rustc[ce5c411ff86ab1b2]::rust_begin_unwind [INFO] [stdout] at /rustc/c2e32f1c9652b13ed99608599c1e855462f421f3/library/std/src/panicking.rs:698:5 [INFO] [stdout] 18: 0x5bf75d667a20 - core::panicking::panic_fmt::h774fb860369a0f7b [INFO] [stdout] at /rustc/c2e32f1c9652b13ed99608599c1e855462f421f3/library/core/src/panicking.rs:80:14 [INFO] [stdout] 19: 0x5bf75d667823 - core::panicking::assert_failed_inner::hbdde3a71af798a31 [INFO] [stdout] at /rustc/c2e32f1c9652b13ed99608599c1e855462f421f3/library/core/src/panicking.rs:444:17 [INFO] [stdout] 20: 0x5bf75d5b0f0e - core::panicking::assert_failed::h56d756667c3f9532 [INFO] [stdout] at /rustc/c2e32f1c9652b13ed99608599c1e855462f421f3/library/core/src/panicking.rs:399:5 [INFO] [stdout] 21: 0x5bf75d5c1646 - hmm_tblout::tests::in_same_as_out_n::ha58071a6e615e08b [INFO] [stderr] error: test failed, to rerun pass `--lib` [INFO] [stdout] at /opt/rustwide/workdir/src/lib.rs:353:9 [INFO] [stdout] 22: 0x5bf75d5c1817 - hmm_tblout::tests::in_same_as_out_n::{{closure}}::h129021466bcfe4f9 [INFO] [stdout] at /opt/rustwide/workdir/src/lib.rs:335:26 [INFO] [stdout] 23: 0x5bf75d5c68c6 - core::ops::function::FnOnce::call_once::hc16506a3cf9d4498 [INFO] [stdout] at /rustc/c2e32f1c9652b13ed99608599c1e855462f421f3/library/core/src/ops/function.rs:250:5 [INFO] [stdout] 24: 0x5bf75d5eeb7b - core::ops::function::FnOnce::call_once::h4f6eabe90cccb47d [INFO] [stdout] at /rustc/c2e32f1c9652b13ed99608599c1e855462f421f3/library/core/src/ops/function.rs:250:5 [INFO] [stdout] 25: 0x5bf75d5eeb7b - test::__rust_begin_short_backtrace::h94208530f2b4c8c7 [INFO] [stdout] at /rustc/c2e32f1c9652b13ed99608599c1e855462f421f3/library/test/src/lib.rs:663:18 [INFO] [stdout] 26: 0x5bf75d602b8d - test::run_test_in_process::{{closure}}::hbdc6a45a78c46404 [INFO] [stdout] at /rustc/c2e32f1c9652b13ed99608599c1e855462f421f3/library/test/src/lib.rs:686:74 [INFO] [stdout] 27: 0x5bf75d602b8d - as core::ops::function::FnOnce<()>>::call_once::h7f9d8efc7eedd165 [INFO] [stdout] at /rustc/c2e32f1c9652b13ed99608599c1e855462f421f3/library/core/src/panic/unwind_safe.rs:274:9 [INFO] [stdout] 28: 0x5bf75d602b8d - std::panicking::catch_unwind::do_call::he5edbaf126c13b99 [INFO] [stdout] at /rustc/c2e32f1c9652b13ed99608599c1e855462f421f3/library/std/src/panicking.rs:590:40 [INFO] [stdout] 29: 0x5bf75d602b8d - std::panicking::catch_unwind::h3d6a8652eceeabce [INFO] [stdout] at /rustc/c2e32f1c9652b13ed99608599c1e855462f421f3/library/std/src/panicking.rs:553:19 [INFO] [stdout] 30: 0x5bf75d602b8d - std::panic::catch_unwind::hbef0c501dd7bb498 [INFO] [stdout] at /rustc/c2e32f1c9652b13ed99608599c1e855462f421f3/library/std/src/panic.rs:359:14 [INFO] [stdout] 31: 0x5bf75d602b8d - test::run_test_in_process::h400008a46a5006a0 [INFO] [stdout] at /rustc/c2e32f1c9652b13ed99608599c1e855462f421f3/library/test/src/lib.rs:686:27 [INFO] [stdout] 32: 0x5bf75d602b8d - test::run_test::{{closure}}::h9a131655b31d9427 [INFO] [stdout] at /rustc/c2e32f1c9652b13ed99608599c1e855462f421f3/library/test/src/lib.rs:607:43 [INFO] [stdout] 33: 0x5bf75d5dc0d4 - test::run_test::{{closure}}::he4a7177c216308c0 [INFO] [stdout] at /rustc/c2e32f1c9652b13ed99608599c1e855462f421f3/library/test/src/lib.rs:637:41 [INFO] [stdout] 34: 0x5bf75d5dc0d4 - std::sys::backtrace::__rust_begin_short_backtrace::hd3980e9c55d6c539 [INFO] [stdout] at /rustc/c2e32f1c9652b13ed99608599c1e855462f421f3/library/std/src/sys/backtrace.rs:158:18 [INFO] [stdout] 35: 0x5bf75d5dfa0a - std::thread::Builder::spawn_unchecked_::{{closure}}::{{closure}}::h18552df67c7aa9b8 [INFO] [stdout] at /rustc/c2e32f1c9652b13ed99608599c1e855462f421f3/library/std/src/thread/mod.rs:562:17 [INFO] [stdout] 36: 0x5bf75d5dfa0a - as core::ops::function::FnOnce<()>>::call_once::h3d7b285234641a08 [INFO] [stdout] at /rustc/c2e32f1c9652b13ed99608599c1e855462f421f3/library/core/src/panic/unwind_safe.rs:274:9 [INFO] [stdout] 37: 0x5bf75d5dfa0a - std::panicking::catch_unwind::do_call::h5a2b5cf36528a5b2 [INFO] [stdout] at /rustc/c2e32f1c9652b13ed99608599c1e855462f421f3/library/std/src/panicking.rs:590:40 [INFO] [stdout] 38: 0x5bf75d5dfa0a - std::panicking::catch_unwind::h7e8b531bbda77d20 [INFO] [stdout] at /rustc/c2e32f1c9652b13ed99608599c1e855462f421f3/library/std/src/panicking.rs:553:19 [INFO] [stdout] 39: 0x5bf75d5dfa0a - std::panic::catch_unwind::hf9bbb2040b4f1e6c [INFO] [stdout] at /rustc/c2e32f1c9652b13ed99608599c1e855462f421f3/library/std/src/panic.rs:359:14 [INFO] [stdout] 40: 0x5bf75d5dfa0a - std::thread::Builder::spawn_unchecked_::{{closure}}::h600f92cf68549574 [INFO] [stdout] at /rustc/c2e32f1c9652b13ed99608599c1e855462f421f3/library/std/src/thread/mod.rs:560:30 [INFO] [stdout] 41: 0x5bf75d5dfa0a - core::ops::function::FnOnce::call_once{{vtable.shim}}::hb6607307df8a1847 [INFO] [stdout] at /rustc/c2e32f1c9652b13ed99608599c1e855462f421f3/library/core/src/ops/function.rs:250:5 [INFO] [stdout] 42: 0x5bf75d6227cf - as core::ops::function::FnOnce>::call_once::h6891ad53a5ed6f52 [INFO] [stdout] at /rustc/c2e32f1c9652b13ed99608599c1e855462f421f3/library/alloc/src/boxed.rs:2085:9 [INFO] [stdout] 43: 0x5bf75d6227cf - std::sys::thread::unix::Thread::new::thread_start::h7f3e77fa86df70af [INFO] [stdout] at /rustc/c2e32f1c9652b13ed99608599c1e855462f421f3/library/std/src/sys/thread/unix.rs:124:17 [INFO] [stdout] 44: 0x7796843edaa4 - [INFO] [stdout] 45: 0x77968447aa64 - clone [INFO] [stdout] 46: 0x0 - [INFO] [stdout] [INFO] [stdout] ---- tests::test_phmmer_write stdout ---- [INFO] [stdout] [INFO] [stdout] thread 'tests::test_phmmer_write' (32) panicked at src/lib.rs:300:9: [INFO] [stdout] assertion `left == right` failed [INFO] [stdout] left: "HBB_HUMAN - MYG_ESCGI - 2.3e-11 30.3 0.1 2.5e-11 30.2 0.1 1.0 1 0 0 1 1 1 1 Human beta hemoglobin.\n" [INFO] [stdout] right: "HBB_HUMAN - MYG_ESCGI - 2.30e-11 30.30 0.10 2.50e-11 30.20 0.10 1.00 1 0 0 1 1 1 1 Human beta hemoglobin.\n" [INFO] [stdout] stack backtrace: [INFO] [stdout] 0: 0x5bf75d64da32 - std::backtrace_rs::backtrace::libunwind::trace::h9ea1e07ac77a25d7 [INFO] [stdout] at /rustc/c2e32f1c9652b13ed99608599c1e855462f421f3/library/std/src/../../backtrace/src/backtrace/libunwind.rs:117:9 [INFO] [stdout] 1: 0x5bf75d64da32 - std::backtrace_rs::backtrace::trace_unsynchronized::h72b75eb83b53d15a [INFO] [stdout] at /rustc/c2e32f1c9652b13ed99608599c1e855462f421f3/library/std/src/../../backtrace/src/backtrace/mod.rs:66:14 [INFO] [stdout] 2: 0x5bf75d64da32 - std::sys::backtrace::_print_fmt::h255777b7ec902439 [INFO] [stdout] at /rustc/c2e32f1c9652b13ed99608599c1e855462f421f3/library/std/src/sys/backtrace.rs:66:9 [INFO] [stdout] 3: 0x5bf75d64da32 - ::fmt::h8a1ac49fcd7ee8ce [INFO] [stdout] at /rustc/c2e32f1c9652b13ed99608599c1e855462f421f3/library/std/src/sys/backtrace.rs:39:26 [INFO] [stdout] 4: 0x5bf75d65ea0f - core::fmt::rt::Argument::fmt::h635cbf3c6754cc90 [INFO] [stdout] at /rustc/c2e32f1c9652b13ed99608599c1e855462f421f3/library/core/src/fmt/rt.rs:173:76 [INFO] [stdout] 5: 0x5bf75d65ea0f - core::fmt::write::hbdcc0ec4f1bab1db [INFO] [stdout] at /rustc/c2e32f1c9652b13ed99608599c1e855462f421f3/library/core/src/fmt/mod.rs:1469:25 [INFO] [stdout] 6: 0x5bf75d61b383 - std::io::default_write_fmt::h2580ece0d4b58e51 [INFO] [stdout] at /rustc/c2e32f1c9652b13ed99608599c1e855462f421f3/library/std/src/io/mod.rs:639:11 [INFO] [stdout] 7: 0x5bf75d61b383 - std::io::Write::write_fmt::hac9e42858f273b87 [INFO] [stdout] at /rustc/c2e32f1c9652b13ed99608599c1e855462f421f3/library/std/src/io/mod.rs:1954:13 [INFO] [stdout] 8: 0x5bf75d627292 - std::sys::backtrace::BacktraceLock::print::h052febbd86f7bf07 [INFO] [stdout] at /rustc/c2e32f1c9652b13ed99608599c1e855462f421f3/library/std/src/sys/backtrace.rs:42:9 [INFO] [stdout] 9: 0x5bf75d62bd6f - std::panicking::default_hook::{{closure}}::h66aeee20dd470abb [INFO] [stdout] at /rustc/c2e32f1c9652b13ed99608599c1e855462f421f3/library/std/src/panicking.rs:301:27 [INFO] [stdout] 10: 0x5bf75d62bc01 - std::panicking::default_hook::h9d66b9642014ce48 [INFO] [stdout] at /rustc/c2e32f1c9652b13ed99608599c1e855462f421f3/library/std/src/panicking.rs:325:9 [INFO] [stdout] 11: 0x5bf75d5eed2e - as core::ops::function::Fn>::call::h8c698701e444e564 [INFO] [stdout] at /rustc/c2e32f1c9652b13ed99608599c1e855462f421f3/library/alloc/src/boxed.rs:2099:9 [INFO] [stdout] 12: 0x5bf75d5eed2e - test::test_main_with_exit_callback::{{closure}}::ha1c98e7b69c4defb [INFO] [stdout] at /rustc/c2e32f1c9652b13ed99608599c1e855462f421f3/library/test/src/lib.rs:145:21 [INFO] [stdout] 13: 0x5bf75d62c37f - as core::ops::function::Fn>::call::hc4f222a8a57c637a [INFO] [stdout] at /rustc/c2e32f1c9652b13ed99608599c1e855462f421f3/library/alloc/src/boxed.rs:2099:9 [INFO] [stdout] 14: 0x5bf75d62c37f - std::panicking::panic_with_hook::h6d5921a1a1fa5a8e [INFO] [stdout] at /rustc/c2e32f1c9652b13ed99608599c1e855462f421f3/library/std/src/panicking.rs:842:13 [INFO] [stdout] 15: 0x5bf75d62c1da - std::panicking::panic_handler::{{closure}}::hafeef6f707d43542 [INFO] [stdout] at /rustc/c2e32f1c9652b13ed99608599c1e855462f421f3/library/std/src/panicking.rs:707:13 [INFO] [stdout] 16: 0x5bf75d6273c9 - std::sys::backtrace::__rust_end_short_backtrace::h08cbc3319a3d0120 [INFO] [stdout] at /rustc/c2e32f1c9652b13ed99608599c1e855462f421f3/library/std/src/sys/backtrace.rs:174:18 [INFO] [stdout] 17: 0x5bf75d60fc1d - __rustc[ce5c411ff86ab1b2]::rust_begin_unwind [INFO] [stdout] at /rustc/c2e32f1c9652b13ed99608599c1e855462f421f3/library/std/src/panicking.rs:698:5 [INFO] [stdout] 18: 0x5bf75d667a20 - core::panicking::panic_fmt::h774fb860369a0f7b [INFO] [stdout] at /rustc/c2e32f1c9652b13ed99608599c1e855462f421f3/library/core/src/panicking.rs:80:14 [INFO] [stdout] 19: 0x5bf75d667823 - core::panicking::assert_failed_inner::hbdde3a71af798a31 [INFO] [stdout] at /rustc/c2e32f1c9652b13ed99608599c1e855462f421f3/library/core/src/panicking.rs:444:17 [INFO] [stdout] 20: 0x5bf75d5b0f0e - core::panicking::assert_failed::h56d756667c3f9532 [INFO] [stdout] at /rustc/c2e32f1c9652b13ed99608599c1e855462f421f3/library/core/src/panicking.rs:399:5 [INFO] [stdout] 21: 0x5bf75d5c1fc0 - hmm_tblout::tests::test_phmmer_write::h843d3ad91036de87 [INFO] [stdout] at /opt/rustwide/workdir/src/lib.rs:300:9 [INFO] [stdout] 22: 0x5bf75d5c2047 - hmm_tblout::tests::test_phmmer_write::{{closure}}::h1fc04e640b786824 [INFO] [stdout] at /opt/rustwide/workdir/src/lib.rs:285:27 [INFO] [stdout] 23: 0x5bf75d5c6676 - core::ops::function::FnOnce::call_once::h44aea04073c0fcc2 [INFO] [stdout] at /rustc/c2e32f1c9652b13ed99608599c1e855462f421f3/library/core/src/ops/function.rs:250:5 [INFO] [stdout] 24: 0x5bf75d5eeb7b - core::ops::function::FnOnce::call_once::h4f6eabe90cccb47d [INFO] [stdout] at /rustc/c2e32f1c9652b13ed99608599c1e855462f421f3/library/core/src/ops/function.rs:250:5 [INFO] [stdout] 25: 0x5bf75d5eeb7b - test::__rust_begin_short_backtrace::h94208530f2b4c8c7 [INFO] [stdout] at /rustc/c2e32f1c9652b13ed99608599c1e855462f421f3/library/test/src/lib.rs:663:18 [INFO] [stdout] 26: 0x5bf75d602b8d - test::run_test_in_process::{{closure}}::hbdc6a45a78c46404 [INFO] [stdout] at /rustc/c2e32f1c9652b13ed99608599c1e855462f421f3/library/test/src/lib.rs:686:74 [INFO] [stdout] 27: 0x5bf75d602b8d - as core::ops::function::FnOnce<()>>::call_once::h7f9d8efc7eedd165 [INFO] [stdout] at /rustc/c2e32f1c9652b13ed99608599c1e855462f421f3/library/core/src/panic/unwind_safe.rs:274:9 [INFO] [stdout] 28: 0x5bf75d602b8d - std::panicking::catch_unwind::do_call::he5edbaf126c13b99 [INFO] [stdout] at /rustc/c2e32f1c9652b13ed99608599c1e855462f421f3/library/std/src/panicking.rs:590:40 [INFO] [stdout] 29: 0x5bf75d602b8d - std::panicking::catch_unwind::h3d6a8652eceeabce [INFO] [stdout] at /rustc/c2e32f1c9652b13ed99608599c1e855462f421f3/library/std/src/panicking.rs:553:19 [INFO] [stdout] 30: 0x5bf75d602b8d - std::panic::catch_unwind::hbef0c501dd7bb498 [INFO] [stdout] at /rustc/c2e32f1c9652b13ed99608599c1e855462f421f3/library/std/src/panic.rs:359:14 [INFO] [stdout] 31: 0x5bf75d602b8d - test::run_test_in_process::h400008a46a5006a0 [INFO] [stdout] at /rustc/c2e32f1c9652b13ed99608599c1e855462f421f3/library/test/src/lib.rs:686:27 [INFO] [stdout] 32: 0x5bf75d602b8d - test::run_test::{{closure}}::h9a131655b31d9427 [INFO] [stdout] at /rustc/c2e32f1c9652b13ed99608599c1e855462f421f3/library/test/src/lib.rs:607:43 [INFO] [stdout] 33: 0x5bf75d5dc0d4 - test::run_test::{{closure}}::he4a7177c216308c0 [INFO] [stdout] at /rustc/c2e32f1c9652b13ed99608599c1e855462f421f3/library/test/src/lib.rs:637:41 [INFO] [stdout] 34: 0x5bf75d5dc0d4 - std::sys::backtrace::__rust_begin_short_backtrace::hd3980e9c55d6c539 [INFO] [stdout] at /rustc/c2e32f1c9652b13ed99608599c1e855462f421f3/library/std/src/sys/backtrace.rs:158:18 [INFO] [stdout] 35: 0x5bf75d5dfa0a - std::thread::Builder::spawn_unchecked_::{{closure}}::{{closure}}::h18552df67c7aa9b8 [INFO] [stdout] at /rustc/c2e32f1c9652b13ed99608599c1e855462f421f3/library/std/src/thread/mod.rs:562:17 [INFO] [stdout] 36: 0x5bf75d5dfa0a - as core::ops::function::FnOnce<()>>::call_once::h3d7b285234641a08 [INFO] [stdout] at /rustc/c2e32f1c9652b13ed99608599c1e855462f421f3/library/core/src/panic/unwind_safe.rs:274:9 [INFO] [stdout] 37: 0x5bf75d5dfa0a - std::panicking::catch_unwind::do_call::h5a2b5cf36528a5b2 [INFO] [stdout] at /rustc/c2e32f1c9652b13ed99608599c1e855462f421f3/library/std/src/panicking.rs:590:40 [INFO] [stdout] 38: 0x5bf75d5dfa0a - std::panicking::catch_unwind::h7e8b531bbda77d20 [INFO] [stdout] at /rustc/c2e32f1c9652b13ed99608599c1e855462f421f3/library/std/src/panicking.rs:553:19 [INFO] [stdout] 39: 0x5bf75d5dfa0a - std::panic::catch_unwind::hf9bbb2040b4f1e6c [INFO] [stdout] at /rustc/c2e32f1c9652b13ed99608599c1e855462f421f3/library/std/src/panic.rs:359:14 [INFO] [stdout] 40: 0x5bf75d5dfa0a - std::thread::Builder::spawn_unchecked_::{{closure}}::h600f92cf68549574 [INFO] [stdout] at /rustc/c2e32f1c9652b13ed99608599c1e855462f421f3/library/std/src/thread/mod.rs:560:30 [INFO] [stdout] 41: 0x5bf75d5dfa0a - core::ops::function::FnOnce::call_once{{vtable.shim}}::hb6607307df8a1847 [INFO] [stdout] at /rustc/c2e32f1c9652b13ed99608599c1e855462f421f3/library/core/src/ops/function.rs:250:5 [INFO] [stdout] 42: 0x5bf75d6227cf - as core::ops::function::FnOnce>::call_once::h6891ad53a5ed6f52 [INFO] [stdout] at /rustc/c2e32f1c9652b13ed99608599c1e855462f421f3/library/alloc/src/boxed.rs:2085:9 [INFO] [stdout] 43: 0x5bf75d6227cf - std::sys::thread::unix::Thread::new::thread_start::h7f3e77fa86df70af [INFO] [stdout] at /rustc/c2e32f1c9652b13ed99608599c1e855462f421f3/library/std/src/sys/thread/unix.rs:124:17 [INFO] [stdout] 44: 0x7796843edaa4 - [INFO] [stdout] 45: 0x77968447aa64 - clone [INFO] [stdout] 46: 0x0 - [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] failures: [INFO] [stdout] tests::in_same_as_out [INFO] [stdout] tests::in_same_as_out_n [INFO] [stdout] tests::test_phmmer_write [INFO] [stdout] [INFO] [stdout] test result: FAILED. 7 passed; 3 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.03s [INFO] [stdout] [INFO] running `Command { std: "docker" "inspect" "80ae0a971ba6ba1975e025313d4f44a30fe433e3de0d59e93d8ab94fde67785e", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "80ae0a971ba6ba1975e025313d4f44a30fe433e3de0d59e93d8ab94fde67785e", kill_on_drop: false }` [INFO] [stdout] 80ae0a971ba6ba1975e025313d4f44a30fe433e3de0d59e93d8ab94fde67785e