[INFO] fetching crate deepbiop-core 0.1.16... [INFO] testing deepbiop-core-0.1.16 against try#c2e32f1c9652b13ed99608599c1e855462f421f3 for pr-146098-7 [INFO] extracting crate deepbiop-core 0.1.16 into /workspace/builds/worker-0-tc2/source [INFO] started tweaking crates.io crate deepbiop-core 0.1.16 [INFO] finished tweaking crates.io crate deepbiop-core 0.1.16 [INFO] tweaked toml for crates.io crate deepbiop-core 0.1.16 written to /workspace/builds/worker-0-tc2/source/Cargo.toml [INFO] validating manifest of crates.io crate deepbiop-core 0.1.16 on toolchain c2e32f1c9652b13ed99608599c1e855462f421f3 [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+c2e32f1c9652b13ed99608599c1e855462f421f3" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] crate crates.io crate deepbiop-core 0.1.16 already has a lockfile, it will not be regenerated [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+c2e32f1c9652b13ed99608599c1e855462f421f3" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-0-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-0-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:4848fb76d95f26979359cc7e45710b1dbc8f3acb7aeedee7c460d7702230f228" "/opt/rustwide/cargo-home/bin/cargo" "+c2e32f1c9652b13ed99608599c1e855462f421f3" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] c20386ef52bbc8e720f9327c348f730517f7e54200ce2a336cc4538444a87a71 [INFO] running `Command { std: "docker" "start" "-a" "c20386ef52bbc8e720f9327c348f730517f7e54200ce2a336cc4538444a87a71", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "c20386ef52bbc8e720f9327c348f730517f7e54200ce2a336cc4538444a87a71", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "c20386ef52bbc8e720f9327c348f730517f7e54200ce2a336cc4538444a87a71", kill_on_drop: false }` [INFO] [stdout] c20386ef52bbc8e720f9327c348f730517f7e54200ce2a336cc4538444a87a71 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-0-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-0-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:4848fb76d95f26979359cc7e45710b1dbc8f3acb7aeedee7c460d7702230f228" "/opt/rustwide/cargo-home/bin/cargo" "+c2e32f1c9652b13ed99608599c1e855462f421f3" "build" "--frozen" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] 80c44098e8c784c6fa098ee3d86b36861d29ef62c45ac87db997e1b8023aa129 [INFO] running `Command { std: "docker" "start" "-a" "80c44098e8c784c6fa098ee3d86b36861d29ef62c45ac87db997e1b8023aa129", kill_on_drop: false }` [INFO] [stderr] Compiling num-traits v0.2.19 [INFO] [stderr] Compiling zerocopy v0.8.27 [INFO] [stderr] Compiling target-lexicon v0.13.3 [INFO] [stderr] Compiling quote v1.0.41 [INFO] [stderr] Compiling ahash v0.8.12 [INFO] [stderr] Compiling lexical-util v1.0.7 [INFO] [stderr] Compiling getrandom v0.2.16 [INFO] [stderr] Compiling regex-syntax v0.8.8 [INFO] [stderr] Compiling cc v1.2.44 [INFO] [stderr] Compiling siphasher v1.0.1 [INFO] [stderr] Compiling arrow-schema v57.0.0 [INFO] [stderr] Compiling pulp v0.21.5 [INFO] [stderr] Compiling libm v0.2.15 [INFO] [stderr] Compiling zlib-rs v0.5.2 [INFO] [stderr] Compiling dyn-stack-macros v0.1.3 [INFO] [stderr] Compiling either v1.15.0 [INFO] [stderr] Compiling rand_core v0.6.4 [INFO] [stderr] Compiling phf_shared v0.11.3 [INFO] [stderr] Compiling syn v2.0.108 [INFO] [stderr] Compiling reborrow v0.5.5 [INFO] [stderr] Compiling lexical-parse-integer v1.0.6 [INFO] [stderr] Compiling lexical-write-integer v1.0.6 [INFO] [stderr] Compiling itertools v0.11.0 [INFO] [stderr] Compiling raw-cpuid v11.6.0 [INFO] [stderr] Compiling malachite-nz v0.4.22 [INFO] [stderr] Compiling unicode-width v0.2.2 [INFO] [stderr] Compiling lexical-parse-float v1.0.6 [INFO] [stderr] Compiling tiny-keccak v2.0.2 [INFO] [stderr] Compiling unic-common v0.9.0 [INFO] [stderr] Compiling pyo3-build-config v0.27.1 [INFO] [stderr] Compiling unic-char-range v0.9.0 [INFO] [stderr] Compiling lexical-write-float v1.0.6 [INFO] [stderr] Compiling getopts v0.2.24 [INFO] [stderr] Compiling unic-char-property v0.9.0 [INFO] [stderr] Compiling toml_edit v0.23.7 [INFO] [stderr] Compiling unic-ucd-version v0.9.0 [INFO] [stderr] Compiling num-integer v0.1.46 [INFO] [stderr] Compiling chrono v0.4.42 [INFO] [stderr] Compiling regex-automata v0.4.13 [INFO] [stderr] Compiling lexical-core v1.0.6 [INFO] [stderr] Compiling atoi v2.0.0 [INFO] [stderr] Compiling flatbuffers v25.9.23 [INFO] [stderr] Compiling rustpython-parser-vendored v0.4.0 [INFO] [stderr] Compiling num-bigint v0.4.6 [INFO] [stderr] Compiling ppv-lite86 v0.2.21 [INFO] [stderr] Compiling proc-macro-crate v3.4.0 [INFO] [stderr] Compiling phf v0.11.3 [INFO] [stderr] Compiling static_assertions v1.1.0 [INFO] [stderr] Compiling stable_deref_trait v1.2.1 [INFO] [stderr] Compiling alloc-no-stdlib v2.0.4 [INFO] [stderr] Compiling num-iter v0.1.45 [INFO] [stderr] Compiling hashbrown v0.14.5 [INFO] [stderr] Compiling alloc-stdlib v0.2.2 [INFO] [stderr] Compiling unic-emoji-char v0.9.0 [INFO] [stderr] Compiling unic-ucd-ident v0.9.0 [INFO] [stderr] Compiling rand_chacha v0.3.1 [INFO] [stderr] Compiling zstd-sys v2.0.16+zstd.1.5.7 [INFO] [stderr] Compiling bzip2-sys v0.1.13+1.0.8 [INFO] [stderr] Compiling lzma-sys v0.1.20 [INFO] [stderr] Compiling csv-core v0.1.13 [INFO] [stderr] Compiling lalrpop-util v0.20.2 [INFO] [stderr] Compiling unindent v0.2.4 [INFO] [stderr] Compiling rand v0.8.5 [INFO] [stderr] Compiling zip v1.1.4 [INFO] [stderr] Compiling pyo3-macros-backend v0.27.1 [INFO] [stderr] Compiling malachite-base v0.4.22 [INFO] [stderr] Compiling pyo3-ffi v0.27.1 [INFO] [stderr] Compiling pyo3 v0.27.1 [INFO] [stderr] Compiling numpy v0.27.0 [INFO] [stderr] Compiling rustc-hash v1.1.0 [INFO] [stderr] Compiling simdutf8 v0.1.5 [INFO] [stderr] Compiling toml_parser v1.0.4 [INFO] [stderr] Compiling csv v1.4.0 [INFO] [stderr] Compiling brotli-decompressor v5.0.0 [INFO] [stderr] Compiling memmap2 v0.9.9 [INFO] [stderr] Compiling ordered-float v2.10.1 [INFO] [stderr] Compiling num-rational v0.4.2 [INFO] [stderr] Compiling toml_datetime v0.7.3 [INFO] [stderr] Compiling serde_spanned v1.0.3 [INFO] [stderr] Compiling phf_generator v0.11.3 [INFO] [stderr] Compiling phf_codegen v0.11.3 [INFO] [stderr] Compiling libloading v0.8.9 [INFO] [stderr] Compiling unicode_names2_generator v1.3.0 [INFO] [stderr] Compiling rustpython-parser v0.4.0 [INFO] [stderr] Compiling toml_writer v1.0.4 [INFO] [stderr] Compiling synstructure v0.13.2 [INFO] [stderr] Compiling darling_core v0.20.11 [INFO] [stderr] Compiling libz-rs-sys v0.5.2 [INFO] [stderr] Compiling twox-hash v2.1.2 [INFO] [stderr] Compiling flate2 v1.1.5 [INFO] [stderr] Compiling integer-encoding v3.0.4 [INFO] [stderr] Compiling bzip2 v0.4.4 [INFO] [stderr] Compiling bstr v1.12.1 [INFO] [stderr] Compiling regex v1.12.2 [INFO] [stderr] Compiling thrift v0.17.0 [INFO] [stderr] Compiling lz4_flex v0.11.5 [INFO] [stderr] Compiling noodles-bgzf v0.43.0 [INFO] [stderr] Compiling noodles-core v0.18.0 [INFO] [stderr] Compiling noodles-fastq v0.21.0 [INFO] [stderr] Compiling brotli v8.0.2 [INFO] [stderr] Compiling toml v0.9.8 [INFO] [stderr] Compiling unicode_names2 v1.3.0 [INFO] [stderr] Compiling noodles-csi v0.51.0 [INFO] [stderr] Compiling noodles-fasta v0.56.0 [INFO] [stderr] Compiling xz2 v0.1.7 [INFO] [stderr] Compiling ordered-float v5.1.0 [INFO] [stderr] Compiling itertools v0.14.0 [INFO] [stderr] Compiling buffer-redux v1.0.2 [INFO] [stderr] Compiling bytecount v0.6.9 [INFO] [stderr] Compiling noodles-sam v0.79.0 [INFO] [stderr] Compiling maplit v1.0.2 [INFO] [stderr] Compiling needletail v0.5.1 [INFO] [stderr] Compiling lexical v7.0.5 [INFO] [stderr] Compiling bytemuck_derive v1.10.2 [INFO] [stderr] Compiling zerocopy-derive v0.8.27 [INFO] [stderr] Compiling serde_derive v1.0.228 [INFO] [stderr] Compiling derive_more-impl v1.0.0 [INFO] [stderr] Compiling is-macro v0.3.7 [INFO] [stderr] Compiling rustpython-parser-core v0.4.0 [INFO] [stderr] error: could not compile `regex-automata` (lib) [INFO] [stderr] [INFO] [stderr] Caused by: [INFO] [stderr] process didn't exit successfully: `/opt/rustwide/rustup-home/toolchains/c2e32f1c9652b13ed99608599c1e855462f421f3/bin/rustc --crate-name regex_automata --edition=2021 /opt/rustwide/cargo-home/registry/src/index.crates.io-1949cf8c6b5b557f/regex-automata-0.4.13/src/lib.rs --error-format=json --json=diagnostic-rendered-ansi,artifacts,future-incompat --crate-type lib --emit=dep-info,metadata,link -C embed-bitcode=no -C debuginfo=2 --allow=unexpected_cfgs --check-cfg 'cfg(docsrs_regex)' --cfg 'feature="alloc"' --cfg 'feature="dfa-onepass"' --cfg 'feature="dfa-search"' --cfg 'feature="hybrid"' --cfg 'feature="meta"' --cfg 'feature="nfa-backtrack"' --cfg 'feature="nfa-pikevm"' --cfg 'feature="nfa-thompson"' --cfg 'feature="perf-inline"' --cfg 'feature="perf-literal"' --cfg 'feature="perf-literal-multisubstring"' --cfg 'feature="perf-literal-substring"' --cfg 'feature="std"' --cfg 'feature="syntax"' --cfg 'feature="unicode"' --cfg 'feature="unicode-age"' --cfg 'feature="unicode-bool"' --cfg 'feature="unicode-case"' --cfg 'feature="unicode-gencat"' --cfg 'feature="unicode-perl"' --cfg 'feature="unicode-script"' --cfg 'feature="unicode-segment"' --cfg 'feature="unicode-word-boundary"' --check-cfg 'cfg(docsrs,test)' --check-cfg 'cfg(feature, values("alloc", "default", "dfa", "dfa-build", "dfa-onepass", "dfa-search", "hybrid", "internal-instrument", "internal-instrument-pikevm", "logging", "meta", "nfa", "nfa-backtrack", "nfa-pikevm", "nfa-thompson", "perf", "perf-inline", "perf-literal", "perf-literal-multisubstring", "perf-literal-substring", "std", "syntax", "unicode", "unicode-age", "unicode-bool", "unicode-case", "unicode-gencat", "unicode-perl", "unicode-script", "unicode-segment", "unicode-word-boundary"))' -C metadata=3724183c73467c67 -C extra-filename=-a722e23bb9c0e1fc --out-dir /opt/rustwide/target/debug/deps -L dependency=/opt/rustwide/target/debug/deps --extern aho_corasick=/opt/rustwide/target/debug/deps/libaho_corasick-89577bcc51bb1d9a.rmeta --extern memchr=/opt/rustwide/target/debug/deps/libmemchr-f9c66c7ba21bf873.rmeta --extern regex_syntax=/opt/rustwide/target/debug/deps/libregex_syntax-504e5c95ede94a26.rmeta --cap-lints allow --cap-lints=forbid` (signal: 9, SIGKILL: kill) [INFO] [stderr] warning: build failed, waiting for other jobs to finish... [INFO] [stderr] error: could not compile `pyo3-macros-backend` (lib) [INFO] [stderr] [INFO] [stderr] Caused by: [INFO] [stderr] process didn't exit successfully: `/opt/rustwide/rustup-home/toolchains/c2e32f1c9652b13ed99608599c1e855462f421f3/bin/rustc --crate-name pyo3_macros_backend --edition=2021 /opt/rustwide/cargo-home/registry/src/index.crates.io-1949cf8c6b5b557f/pyo3-macros-backend-0.27.1/src/lib.rs --error-format=json --json=diagnostic-rendered-ansi,artifacts,future-incompat --crate-type lib --emit=dep-info,metadata,link -C embed-bitcode=no --warn=rust_2018_idioms '--warn=clippy::useless_transmute' '--warn=clippy::used_underscore_binding' --warn=unused_lifetimes --warn=unsafe_op_in_unsafe_fn '--warn=clippy::unnecessary_wraps' '--allow=clippy::undocumented_unsafe_blocks' '--warn=clippy::todo' --warn=rust_2021_prelude_collisions '--warn=clippy::manual_ok_or' '--warn=clippy::manual_assert' '--warn=clippy::let_unit_value' --warn=invalid_doc_attributes '--warn=clippy::flat_map_option' '--warn=clippy::filter_map_next' '--warn=clippy::explicit_iter_loop' '--warn=clippy::explicit_into_iter_loop' --warn=elided_lifetimes_in_paths '--warn=clippy::dbg_macro' '--warn=clippy::checked_conversions' '--warn=rustdoc::broken_intra_doc_links' '--warn=rustdoc::bare_urls' --check-cfg 'cfg(docsrs,test)' --check-cfg 'cfg(feature, values("experimental-async", "experimental-inspect"))' -C metadata=fb79faf23089971b -C extra-filename=-0907eed9e96687e3 --out-dir /opt/rustwide/target/debug/deps -L dependency=/opt/rustwide/target/debug/deps --extern heck=/opt/rustwide/target/debug/deps/libheck-8e1f98ffb0a497ae.rmeta --extern proc_macro2=/opt/rustwide/target/debug/deps/libproc_macro2-7f248eb89d15af9d.rmeta --extern pyo3_build_config=/opt/rustwide/target/debug/deps/libpyo3_build_config-9faa061389620981.rmeta --extern quote=/opt/rustwide/target/debug/deps/libquote-12dfc9a7782abd53.rmeta --extern syn=/opt/rustwide/target/debug/deps/libsyn-23687398739b910c.rmeta --cap-lints allow --cap-lints=forbid --cfg return_position_impl_trait_in_traits --cfg c_str_lit --cfg diagnostic_namespace --cfg io_error_more --cfg mut_ref_in_const_fn --cfg fn_ptr_eq --cfg from_bytes_with_nul_error --check-cfg 'cfg(Py_LIMITED_API)' --check-cfg 'cfg(Py_GIL_DISABLED)' --check-cfg 'cfg(PyPy)' --check-cfg 'cfg(GraalPy)' --check-cfg 'cfg(py_sys_config, values("Py_DEBUG", "Py_REF_DEBUG", "Py_TRACE_REFS", "COUNT_ALLOCS"))' --check-cfg 'cfg(pyo3_disable_reference_pool)' --check-cfg 'cfg(pyo3_leak_on_drop_without_reference_pool)' --check-cfg 'cfg(Py_3_7)' --check-cfg 'cfg(Py_3_8)' --check-cfg 'cfg(Py_3_9)' --check-cfg 'cfg(Py_3_10)' --check-cfg 'cfg(Py_3_11)' --check-cfg 'cfg(Py_3_12)' --check-cfg 'cfg(Py_3_13)' --check-cfg 'cfg(Py_3_14)' --check-cfg 'cfg(Py_3_15)' --check-cfg 'cfg(return_position_impl_trait_in_traits)' --check-cfg 'cfg(c_str_lit)' --check-cfg 'cfg(diagnostic_namespace)' --check-cfg 'cfg(io_error_more)' --check-cfg 'cfg(mut_ref_in_const_fn)' --check-cfg 'cfg(fn_ptr_eq)' --check-cfg 'cfg(from_bytes_with_nul_error)'` (signal: 9, SIGKILL: kill) [INFO] running `Command { std: "docker" "inspect" "80c44098e8c784c6fa098ee3d86b36861d29ef62c45ac87db997e1b8023aa129", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "80c44098e8c784c6fa098ee3d86b36861d29ef62c45ac87db997e1b8023aa129", kill_on_drop: false }` [INFO] [stdout] 80c44098e8c784c6fa098ee3d86b36861d29ef62c45ac87db997e1b8023aa129