[INFO] fetching crate hpo 0.12.0...
[INFO] testing hpo-0.12.0 against master#c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38 for pr-146098-7
[INFO] extracting crate hpo 0.12.0 into /workspace/builds/worker-4-tc1/source
[INFO] started tweaking crates.io crate hpo 0.12.0
[INFO] removed 0 missing examples
[INFO] finished tweaking crates.io crate hpo 0.12.0
[INFO] tweaked toml for crates.io crate hpo 0.12.0 written to /workspace/builds/worker-4-tc1/source/Cargo.toml
[INFO] validating manifest of crates.io crate hpo 0.12.0 on toolchain c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] crate crates.io crate hpo 0.12.0 already has a lockfile, it will not be regenerated
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] [stderr]     Updating crates.io index
[INFO] [stderr]  Downloading crates ...
[INFO] [stderr]   Downloaded oorandom v11.1.4
[INFO] [stderr]   Downloaded simple_logger v4.3.3
[INFO] [stderr]   Downloaded serde_json v1.0.139
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-4-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-4-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:4848fb76d95f26979359cc7e45710b1dbc8f3acb7aeedee7c460d7702230f228" "/opt/rustwide/cargo-home/bin/cargo" "+c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] [stdout] a9b1790b34574f94b682657fe2c594488a00e2767b107a8e2fc37a1de5443923
[INFO] running `Command { std: "docker" "start" "-a" "a9b1790b34574f94b682657fe2c594488a00e2767b107a8e2fc37a1de5443923", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "a9b1790b34574f94b682657fe2c594488a00e2767b107a8e2fc37a1de5443923", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "a9b1790b34574f94b682657fe2c594488a00e2767b107a8e2fc37a1de5443923", kill_on_drop: false }`
[INFO] [stdout] a9b1790b34574f94b682657fe2c594488a00e2767b107a8e2fc37a1de5443923
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-4-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-4-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:4848fb76d95f26979359cc7e45710b1dbc8f3acb7aeedee7c460d7702230f228" "/opt/rustwide/cargo-home/bin/cargo" "+c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38" "build" "--frozen" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] 66a28f4deca9185e4ca161a967d354a2525cdf24c84fc1431f3ffc075dedf1fb
[INFO] running `Command { std: "docker" "start" "-a" "66a28f4deca9185e4ca161a967d354a2525cdf24c84fc1431f3ffc075dedf1fb", kill_on_drop: false }`
[INFO] [stderr]    Compiling proc-macro2 v1.0.93
[INFO] [stderr]    Compiling unicode-ident v1.0.17
[INFO] [stderr]    Compiling thiserror v2.0.11
[INFO] [stderr]    Compiling once_cell v1.20.3
[INFO] [stderr]    Compiling smallvec v1.14.0
[INFO] [stderr]    Compiling tracing-core v0.1.33
[INFO] [stderr]    Compiling quote v1.0.38
[INFO] [stderr]    Compiling syn v2.0.98
[INFO] [stderr]    Compiling tracing-attributes v0.1.28
[INFO] [stderr]    Compiling thiserror-impl v2.0.11
[INFO] [stderr]    Compiling tracing v0.1.41
[INFO] [stderr]    Compiling hpo v0.12.0 (/opt/rustwide/workdir)
[INFO] [stderr]     Finished `dev` profile [unoptimized + debuginfo] target(s) in 10.58s
[INFO] running `Command { std: "docker" "inspect" "66a28f4deca9185e4ca161a967d354a2525cdf24c84fc1431f3ffc075dedf1fb", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "66a28f4deca9185e4ca161a967d354a2525cdf24c84fc1431f3ffc075dedf1fb", kill_on_drop: false }`
[INFO] [stdout] 66a28f4deca9185e4ca161a967d354a2525cdf24c84fc1431f3ffc075dedf1fb
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-4-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-4-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:4848fb76d95f26979359cc7e45710b1dbc8f3acb7aeedee7c460d7702230f228" "/opt/rustwide/cargo-home/bin/cargo" "+c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] cfee4dc7d57411e8804c37e21320cd310233d4aa114519d6fd5f9467ac0a7cd9
[INFO] running `Command { std: "docker" "start" "-a" "cfee4dc7d57411e8804c37e21320cd310233d4aa114519d6fd5f9467ac0a7cd9", kill_on_drop: false }`
[INFO] [stderr]    Compiling serde v1.0.218
[INFO] [stderr]    Compiling libc v0.2.169
[INFO] [stderr]    Compiling itoa v1.0.14
[INFO] [stderr]    Compiling either v1.13.0
[INFO] [stderr]    Compiling num-traits v0.2.19
[INFO] [stderr]    Compiling indexmap v1.9.3
[INFO] [stderr]    Compiling serde_json v1.0.139
[INFO] [stderr]    Compiling ryu v1.0.19
[INFO] [stderr]    Compiling regex-syntax v0.8.5
[INFO] [stderr]    Compiling half v2.4.1
[INFO] [stderr]    Compiling time-core v0.1.2
[INFO] [stderr]    Compiling os_str_bytes v6.6.1
[INFO] [stderr]    Compiling serde_derive v1.0.218
[INFO] [stderr]    Compiling deranged v0.3.11
[INFO] [stderr]    Compiling textwrap v0.16.1
[INFO] [stderr]    Compiling num_threads v0.1.7
[INFO] [stderr]    Compiling time-macros v0.2.19
[INFO] [stderr]    Compiling colored v2.2.0
[INFO] [stderr]    Compiling clap_lex v0.2.4
[INFO] [stderr]    Compiling log v0.4.26
[INFO] [stderr]    Compiling oorandom v11.1.4
[INFO] [stderr]    Compiling itertools v0.10.5
[INFO] [stderr]    Compiling rayon v1.10.0
[INFO] [stderr]    Compiling ciborium-ll v0.2.2
[INFO] [stderr]    Compiling clap v3.2.25
[INFO] [stderr]    Compiling atty v0.2.14
[INFO] [stderr]    Compiling plotters v0.3.7
[INFO] [stderr]    Compiling criterion-plot v0.5.0
[INFO] [stderr]    Compiling time v0.3.37
[INFO] [stderr]    Compiling regex-automata v0.4.9
[INFO] [stderr]    Compiling simple_logger v4.3.3
[INFO] [stderr]    Compiling regex v1.11.1
[INFO] [stderr]    Compiling ciborium v0.2.2
[INFO] [stderr]    Compiling tinytemplate v1.2.1
[INFO] [stderr]    Compiling criterion v0.4.0
[INFO] [stderr]    Compiling hpo v0.12.0 (/opt/rustwide/workdir)
[INFO] [stderr]     Finished `test` profile [unoptimized + debuginfo] target(s) in 26.44s
[INFO] running `Command { std: "docker" "inspect" "cfee4dc7d57411e8804c37e21320cd310233d4aa114519d6fd5f9467ac0a7cd9", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "cfee4dc7d57411e8804c37e21320cd310233d4aa114519d6fd5f9467ac0a7cd9", kill_on_drop: false }`
[INFO] [stdout] cfee4dc7d57411e8804c37e21320cd310233d4aa114519d6fd5f9467ac0a7cd9
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-4-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-4-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:4848fb76d95f26979359cc7e45710b1dbc8f3acb7aeedee7c460d7702230f228" "/opt/rustwide/cargo-home/bin/cargo" "+c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38" "test" "--frozen", kill_on_drop: false }`
[INFO] [stdout] 378ab0e056baa64666189254c87df81b24e29725c413de8fddd1fe40df3f54ab
[INFO] running `Command { std: "docker" "start" "-a" "378ab0e056baa64666189254c87df81b24e29725c413de8fddd1fe40df3f54ab", kill_on_drop: false }`
[INFO] [stderr]     Finished `test` profile [unoptimized + debuginfo] target(s) in 0.13s
[INFO] [stderr]      Running unittests src/lib.rs (/opt/rustwide/target/debug/deps/hpo-c1aa8057bd8ac04e)
[INFO] [stdout] 
[INFO] [stdout] running 84 tests
[INFO] [stdout] test annotations::gene::test::gene_with_long_name ... ok
[INFO] [stdout] test annotations::gene::test::gene_to_and_from_binary ... ok
[INFO] [stdout] test annotations::gene::test::gene_with_non_utf8_name ... ok
[INFO] [stdout] test annotations::gene::test::gene_to_binary ... ok
[INFO] [stdout] test annotations::omim_disease::test::disease_with_non_utf8_name ... ok
[INFO] [stdout] test annotations::omim_disease::test::disease_to_and_from_binary ... ok
[INFO] [stdout] test annotations::omim_disease::test::disease_with_long_name ... ok
[INFO] [stdout] test annotations::omim_disease::test::disease_with_wrong_length ... ok
[INFO] [stdout] test annotations::gene::test::gene_with_wrong_length ... ok
[INFO] [stdout] test annotations::omim_disease::test::disease_to_binary ... ok
[INFO] [stdout] test matrix::tests::test_col_iterator_sums ... ok
[INFO] [stdout] test matrix::tests::test_column_iterator ... ok
[INFO] [stdout] test matrix::tests::test_empty_row_iterator ... ok
[INFO] [stdout] test matrix::tests::test_row_index_iterator ... ok
[INFO] [stdout] test matrix::tests::test_row_iterator_sums ... ok
[INFO] [stdout] test parser::disease_to_hpo::test_omim_parsing::test_correct_omim ... ok
[INFO] [stdout] test matrix::tests::test_row_iterator ... ok
[INFO] [stdout] test matrix::tests::test_column_index_iterator ... ok
[INFO] [stdout] test parser::disease_to_hpo::test_omim_parsing::test_correct_orpha ... ok
[INFO] [stdout] test parser::disease_to_hpo::test_omim_parsing::test_invalid_hpo_id ... ok
[INFO] [stdout] test parser::disease_to_hpo::test_omim_parsing::test_invalid_input ... ok
[INFO] [stdout] test parser::disease_to_hpo::test_omim_parsing::test_skip_comment ... ok
[INFO] [stdout] test parser::disease_to_hpo::test_omim_parsing::test_invalid_omim_id ... ok
[INFO] [stdout] test parser::disease_to_hpo::test_omim_parsing::test_skip_not ... ok
[INFO] [stdout] test parser::disease_to_hpo::test_omim_parsing::test_skip_orpha_not ... ok
[INFO] [stdout] test parser::gene_to_hpo::test::test_remove_header_ncbi_gene ... ok
[INFO] [stdout] test parser::gene_to_hpo::test_genes_to_phenotype::test_parse_correct_line_with_newline ... ok
[INFO] [stdout] test parser::gene_to_hpo::test_genes_to_phenotype::test_parse_invalid_hpo ... ok
[INFO] [stdout] test parser::gene_to_hpo::test_genes_to_phenotype::test_parse_missing_id ... ok
[INFO] [stdout] test parser::gene_to_hpo::test::test_remove_header_hpo_id ... ok
[INFO] [stdout] test parser::gene_to_hpo::test_genes_to_phenotype::test_parse_correct_line_without_newline ... ok
[INFO] [stdout] test parser::gene_to_hpo::test::test_remove_header_fails ... ok
[INFO] [stdout] test parser::gene_to_hpo::test::test_remove_header_hashtag ... ok
[INFO] [stdout] test parser::gene_to_hpo::test_genes_to_phenotype::test_parse_missing_hpo ... ok
[INFO] [stdout] test parser::gene_to_hpo::test_genes_to_phenotype::test_parse_missing_symbol ... ok
[INFO] [stdout] test parser::gene_to_hpo::test_phenotpye_to_genes::test_parse_missing_hpo ... ok
[INFO] [stdout] test parser::gene_to_hpo::test_phenotpye_to_genes::test_parse_correct_line_with_newline ... ok
[INFO] [stdout] test parser::gene_to_hpo::test_phenotpye_to_genes::test_parse_correct_line_without_newline ... ok
[INFO] [stdout] test parser::gene_to_hpo::test_phenotpye_to_genes::test_parse_invalid_hpo ... ok
[INFO] [stdout] test parser::gene_to_hpo::test_phenotpye_to_genes::test_parse_missing_id ... ok
[INFO] [stdout] test parser::gene_to_hpo::test_phenotpye_to_genes::test_parse_empty_symbol ... ok
[INFO] [stdout] test stats::hypergeom::statrs::test::test_fcache ... ok
[INFO] [stdout] test stats::hypergeom::statrs::test::test_hypergeom_build ... ok
[INFO] [stdout] test stats::hypergeom::statrs::test::min ... ok
[INFO] [stdout] test stats::hypergeom::statrs::test::test_hypergeom_max ... ok
[INFO] [stdout] test stats::test::iterate_frequencies ... ok
[INFO] [stdout] test stats::test::iterate_counts ... ok
[INFO] [stdout] test term::group::tests::test_bitand_2 ... ok
[INFO] [stdout] test term::group::tests::test_bitor_set1 ... ok
[INFO] [stdout] test term::group::tests::test_bitor_set2 ... ok
[INFO] [stdout] test term::group::tests::test_bitand ... ok
[INFO] [stdout] test term::group::tests::test_bitor_set3 ... ok
[INFO] [stdout] test stats::hypergeom::statrs::test::test_hypergeom_cdf ... ok
[INFO] [stdout] test term::group::tests::test_bitor_set4 ... ok
[INFO] [stdout] test term::group::tests::test_hpogroup_iter ... ok
[INFO] [stderr] error: test failed, to rerun pass `--lib`
[INFO] [stderr] 
[INFO] [stderr] Caused by:
[INFO] [stderr]   process didn't exit successfully: `/opt/rustwide/target/debug/deps/hpo-c1aa8057bd8ac04e` (signal: 9, SIGKILL: kill)
[INFO] running `Command { std: "docker" "inspect" "378ab0e056baa64666189254c87df81b24e29725c413de8fddd1fe40df3f54ab", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "378ab0e056baa64666189254c87df81b24e29725c413de8fddd1fe40df3f54ab", kill_on_drop: false }`
[INFO] [stdout] 378ab0e056baa64666189254c87df81b24e29725c413de8fddd1fe40df3f54ab