[INFO] fetching crate hmm_tblout 0.4.23... [INFO] testing hmm_tblout-0.4.23 against master#c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38 for pr-146098-7 [INFO] extracting crate hmm_tblout 0.4.23 into /workspace/builds/worker-3-tc1/source [INFO] started tweaking crates.io crate hmm_tblout 0.4.23 [INFO] removed 0 missing examples [INFO] finished tweaking crates.io crate hmm_tblout 0.4.23 [INFO] tweaked toml for crates.io crate hmm_tblout 0.4.23 written to /workspace/builds/worker-3-tc1/source/Cargo.toml [INFO] validating manifest of crates.io crate hmm_tblout 0.4.23 on toolchain c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38 [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] crate crates.io crate hmm_tblout 0.4.23 already has a lockfile, it will not be regenerated [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:4848fb76d95f26979359cc7e45710b1dbc8f3acb7aeedee7c460d7702230f228" "/opt/rustwide/cargo-home/bin/cargo" "+c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] 4c9ecd25e671dabcfbb1ef79878138b75c4ddcc48eed31e8b3a213f2aab6c99c [INFO] running `Command { std: "docker" "start" "-a" "4c9ecd25e671dabcfbb1ef79878138b75c4ddcc48eed31e8b3a213f2aab6c99c", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "4c9ecd25e671dabcfbb1ef79878138b75c4ddcc48eed31e8b3a213f2aab6c99c", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "4c9ecd25e671dabcfbb1ef79878138b75c4ddcc48eed31e8b3a213f2aab6c99c", kill_on_drop: false }` [INFO] [stdout] 4c9ecd25e671dabcfbb1ef79878138b75c4ddcc48eed31e8b3a213f2aab6c99c [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:4848fb76d95f26979359cc7e45710b1dbc8f3acb7aeedee7c460d7702230f228" "/opt/rustwide/cargo-home/bin/cargo" "+c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38" "build" "--frozen" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] 5351250e5364beaf34417114a388de44babdca34f46673d037a8ff17eec177d6 [INFO] running `Command { std: "docker" "start" "-a" "5351250e5364beaf34417114a388de44babdca34f46673d037a8ff17eec177d6", kill_on_drop: false }` [INFO] [stderr] Compiling hmm_tblout v0.4.23 (/opt/rustwide/workdir) [INFO] [stdout] warning: hiding a lifetime that's elided elsewhere is confusing [INFO] [stdout] --> src/reader.rs:476:20 [INFO] [stdout] | [INFO] [stdout] 476 | pub fn records(&mut self) -> RecordsIter { [INFO] [stdout] | ^^^^^^^^^ ^^^^^^^^^^^^^^ the same lifetime is hidden here [INFO] [stdout] | | [INFO] [stdout] | the lifetime is elided here [INFO] [stdout] | [INFO] [stdout] = help: the same lifetime is referred to in inconsistent ways, making the signature confusing [INFO] [stdout] = note: `#[warn(mismatched_lifetime_syntaxes)]` on by default [INFO] [stdout] help: use `'_` for type paths [INFO] [stdout] | [INFO] [stdout] 476 | pub fn records(&mut self) -> RecordsIter<'_, R> { [INFO] [stdout] | +++ [INFO] [stdout] [INFO] [stdout] [INFO] [stderr] Finished `dev` profile [unoptimized + debuginfo] target(s) in 0.58s [INFO] running `Command { std: "docker" "inspect" "5351250e5364beaf34417114a388de44babdca34f46673d037a8ff17eec177d6", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "5351250e5364beaf34417114a388de44babdca34f46673d037a8ff17eec177d6", kill_on_drop: false }` [INFO] [stdout] 5351250e5364beaf34417114a388de44babdca34f46673d037a8ff17eec177d6 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:4848fb76d95f26979359cc7e45710b1dbc8f3acb7aeedee7c460d7702230f228" "/opt/rustwide/cargo-home/bin/cargo" "+c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] 368d6bbf03ddb04ebed40650161520ef5601e6dd38aad42a8d6caa2f2092ab70 [INFO] running `Command { std: "docker" "start" "-a" "368d6bbf03ddb04ebed40650161520ef5601e6dd38aad42a8d6caa2f2092ab70", kill_on_drop: false }` [INFO] [stdout] warning: hiding a lifetime that's elided elsewhere is confusing [INFO] [stdout] --> src/reader.rs:476:20 [INFO] [stdout] | [INFO] [stdout] 476 | pub fn records(&mut self) -> RecordsIter { [INFO] [stdout] | ^^^^^^^^^ ^^^^^^^^^^^^^^ the same lifetime is hidden here [INFO] [stdout] | | [INFO] [stdout] | the lifetime is elided here [INFO] [stdout] | [INFO] [stdout] = help: the same lifetime is referred to in inconsistent ways, making the signature confusing [INFO] [stdout] = note: `#[warn(mismatched_lifetime_syntaxes)]` on by default [INFO] [stdout] help: use `'_` for type paths [INFO] [stdout] | [INFO] [stdout] 476 | pub fn records(&mut self) -> RecordsIter<'_, R> { [INFO] [stdout] | +++ [INFO] [stdout] [INFO] [stdout] [INFO] [stderr] Compiling hmm_tblout v0.4.23 (/opt/rustwide/workdir) [INFO] [stdout] warning: constant `NHMMSCAN_FILE` is never used [INFO] [stdout] --> src/lib.rs:140:11 [INFO] [stdout] | [INFO] [stdout] 140 | const NHMMSCAN_FILE: &str = "# target name accession query name accession hmmfrom hmm to alifrom ali to env... [INFO] [stdout] | ^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(dead_code)]` (part of `#[warn(unused)]`) on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: constant `HMMSCAN_FILE` is never used [INFO] [stdout] --> src/lib.rs:161:11 [INFO] [stdout] | [INFO] [stdout] 161 | const HMMSCAN_FILE: &str = "# --- full sequence ---- --- best 1 d... [INFO] [stdout] | ^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: constant `HMMSEARCH_FILE` is never used [INFO] [stdout] --> src/lib.rs:189:11 [INFO] [stdout] | [INFO] [stdout] 189 | const HMMSEARCH_FILE: &str = "# --- full sequence ---- --- best 1... [INFO] [stdout] | ^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: hiding a lifetime that's elided elsewhere is confusing [INFO] [stdout] --> src/reader.rs:476:20 [INFO] [stdout] | [INFO] [stdout] 476 | pub fn records(&mut self) -> RecordsIter { [INFO] [stdout] | ^^^^^^^^^ ^^^^^^^^^^^^^^ the same lifetime is hidden here [INFO] [stdout] | | [INFO] [stdout] | the lifetime is elided here [INFO] [stdout] | [INFO] [stdout] = help: the same lifetime is referred to in inconsistent ways, making the signature confusing [INFO] [stdout] = note: `#[warn(mismatched_lifetime_syntaxes)]` on by default [INFO] [stdout] help: use `'_` for type paths [INFO] [stdout] | [INFO] [stdout] 476 | pub fn records(&mut self) -> RecordsIter<'_, R> { [INFO] [stdout] | +++ [INFO] [stdout] [INFO] [stdout] [INFO] [stderr] Finished `test` profile [unoptimized + debuginfo] target(s) in 1.11s [INFO] running `Command { std: "docker" "inspect" "368d6bbf03ddb04ebed40650161520ef5601e6dd38aad42a8d6caa2f2092ab70", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "368d6bbf03ddb04ebed40650161520ef5601e6dd38aad42a8d6caa2f2092ab70", kill_on_drop: false }` [INFO] [stdout] 368d6bbf03ddb04ebed40650161520ef5601e6dd38aad42a8d6caa2f2092ab70 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:4848fb76d95f26979359cc7e45710b1dbc8f3acb7aeedee7c460d7702230f228" "/opt/rustwide/cargo-home/bin/cargo" "+c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38" "test" "--frozen", kill_on_drop: false }` [INFO] [stdout] b3c2a186be3d2e3ce43f92f688c2d10700a7de34834e5163218636aab7d3d468 [INFO] running `Command { std: "docker" "start" "-a" "b3c2a186be3d2e3ce43f92f688c2d10700a7de34834e5163218636aab7d3d468", kill_on_drop: false }` [INFO] [stderr] warning: hiding a lifetime that's elided elsewhere is confusing [INFO] [stderr] --> src/reader.rs:476:20 [INFO] [stderr] | [INFO] [stderr] 476 | pub fn records(&mut self) -> RecordsIter { [INFO] [stderr] | ^^^^^^^^^ ^^^^^^^^^^^^^^ the same lifetime is hidden here [INFO] [stderr] | | [INFO] [stderr] | the lifetime is elided here [INFO] [stderr] | [INFO] [stderr] = help: the same lifetime is referred to in inconsistent ways, making the signature confusing [INFO] [stderr] = note: `#[warn(mismatched_lifetime_syntaxes)]` on by default [INFO] [stderr] help: use `'_` for type paths [INFO] [stderr] | [INFO] [stderr] 476 | pub fn records(&mut self) -> RecordsIter<'_, R> { [INFO] [stderr] | +++ [INFO] [stderr] [INFO] [stderr] warning: `hmm_tblout` (lib) generated 1 warning (run `cargo fix --lib -p hmm_tblout` to apply 1 suggestion) [INFO] [stderr] warning: constant `NHMMSCAN_FILE` is never used [INFO] [stderr] --> src/lib.rs:140:11 [INFO] [stderr] | [INFO] [stderr] 140 | const NHMMSCAN_FILE: &str = "# target name accession query name accession hmmfrom hmm to alifrom ali to env... [INFO] [stderr] | ^^^^^^^^^^^^^ [INFO] [stderr] | [INFO] [stderr] = note: `#[warn(dead_code)]` (part of `#[warn(unused)]`) on by default [INFO] [stderr] [INFO] [stderr] warning: constant `HMMSCAN_FILE` is never used [INFO] [stderr] --> src/lib.rs:161:11 [INFO] [stderr] | [INFO] [stderr] 161 | const HMMSCAN_FILE: &str = "# --- full sequence ---- --- best 1 d... [INFO] [stderr] | ^^^^^^^^^^^^ [INFO] [stderr] [INFO] [stderr] warning: constant `HMMSEARCH_FILE` is never used [INFO] [stderr] --> src/lib.rs:189:11 [INFO] [stderr] | [INFO] [stderr] 189 | const HMMSEARCH_FILE: &str = "# --- full sequence ---- --- best 1... [INFO] [stderr] | ^^^^^^^^^^^^^^ [INFO] [stderr] [INFO] [stderr] warning: `hmm_tblout` (lib test) generated 4 warnings (1 duplicate) [INFO] [stderr] Finished `test` profile [unoptimized + debuginfo] target(s) in 0.03s [INFO] [stderr] Running unittests src/lib.rs (/opt/rustwide/target/debug/deps/hmm_tblout-8a0efce9e16691c1) [INFO] [stdout] [INFO] [stdout] running 10 tests [INFO] [stdout] test tests::test_header ... ok [INFO] [stdout] test tests::test_cmscan ... ok [INFO] [stdout] test tests::test_meta ... ok [INFO] [stdout] test tests::test_phmmer_records ... ok [INFO] [stdout] test tests::test_jackhmmer_meta ... ok [INFO] [stdout] test tests::test_whole_file ... ok [INFO] [stdout] test tests::test_jackhmmer_records ... ok [INFO] [stdout] test tests::in_same_as_out ... FAILED [INFO] [stdout] test tests::in_same_as_out_n ... FAILED [INFO] [stderr] error: test failed, to rerun pass `--lib` [INFO] [stdout] test tests::test_phmmer_write ... FAILED [INFO] [stdout] [INFO] [stdout] failures: [INFO] [stdout] [INFO] [stdout] ---- tests::in_same_as_out stdout ---- [INFO] [stdout] [INFO] [stdout] thread 'tests::in_same_as_out' (26) panicked at src/lib.rs:327:9: [INFO] [stdout] assertion `left == right` failed [INFO] [stdout] left: "# --- full sequence ---- --- best 1 domain ---- --- domain number estimation ----\n# target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target\n#------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- ---------------------\nHBB_HUMAN - MYG_ESCGI - 2.3e-11 30.3 0.1 2.5e-11 30.2 0.1 1.0 1 0 0 1 1 1 1 Human beta hemoglobin.\nHBB_HUMAN - MYG_HORSE - 5.1e-12 32.3 0.1 6.1e-12 32.1 0.1 1.0 1 0 0 1 1 1 1 Human beta hemoglobin.\nHBB_HUMAN - MYG_PROGU - 9.3e-13 34.6 0 1.1e-12 34.4 0 1.0 1 0 0 1 1 1 1 Human beta hemoglobin.\nHBB_HUMAN - MYG_SAISC - 7.4e-13 35.1 0 8e-13 35 0 1.0 1 0 0 1 1 1 1 Human beta hemoglobin.\nHBB_HUMAN - HBB_LARRI - 0e0 222.2 0.1 0e0 222 0.1 1.0 1 0 0 1 1 1 1 Human beta hemoglobin.\nHBB_HUMAN - HBB1_VAREX - 0e0 210.6 0.2 0e0 210.5 0.2 1.0 1 0 0 1 1 1 1 Human beta hemoglobin.\nHBB_HUMAN - HBB2_XENTR - 0e0 163.9 0.1 0e0 163.7 0.1 1.0 1 0 0 1 1 1 1 Human beta hemoglobin.\nHBB_HUMAN - HBBL_RANCA - 0e0 180 0.1 0e0 179.9 0.1 1.0 1 0 0 1 1 1 1 Human beta hemoglobin.\nHBB_HUMAN - HBB2_TRICR - 0e0 143 0 0e0 142.8 0 1.0 1 0 0 1 1 1 1 Human beta hemoglobin.\n#\n# Program: phmmer\n# Version: 3.2 (June 2018)\n# Pipeline mode: SEARCH\n# Query file: /var/lib/cwl/stgc72dd3bc-8891-4b83-83e7-215178692be8/globins45.fa\n# Target file: /var/lib/cwl/stgf46f4fb0-f7ec-4fbf-b608-74ca6d8a20a0/HBB_HUMAN\n# Options: phmmer -o globins45.fa.phmmer_matches.out --tblout globins45.fa.phmmer_matches.tblout /var/lib/cwl/stgc72dd3bc-8891-4b83-83e7-215178692be8/globins45.fa /var/lib/cwl/stgf46f4fb0-f7ec-4fbf-b608-74ca6d8a20a0/HBB_HUMAN\n# Current dir: /tmp/cwl\n# Date: Tue Jul 17 13:01:19 2018\n# [ok]" [INFO] [stdout] right: "# --- full sequence ---- --- best 1 domain ---- --- domain number estimation ----\n# target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target\n#------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- ---------------------\nHBB_HUMAN - MYG_ESCGI - 2.3e-11 30.3 0.1 2.5e-11 30.2 0.1 1.0 1 0 0 1 1 1 1 Human beta hemoglobin.\nHBB_HUMAN - MYG_HORSE - 5.1e-12 32.3 0.1 6.1e-12 32.1 0.1 1.0 1 0 0 1 1 1 1 Human beta hemoglobin.\nHBB_HUMAN - MYG_PROGU - 9.3e-13 34.6 0.0 1.1e-12 34.4 0.0 1.0 1 0 0 1 1 1 1 Human beta hemoglobin.\nHBB_HUMAN - MYG_SAISC - 7.4e-13 35.1 0.0 8e-13 35.0 0.0 1.0 1 0 0 1 1 1 1 Human beta hemoglobin.\nHBB_HUMAN - HBB_LARRI - 1.5e-70 222.2 0.1 1.6e-70 222.0 0.1 1.0 1 0 0 1 1 1 1 Human beta hemoglobin.\nHBB_HUMAN - HBB1_VAREX - 7e-67 210.6 0.2 7.7e-67 210.5 0.2 1.0 1 0 0 1 1 1 1 Human beta hemoglobin.\nHBB_HUMAN - HBB2_XENTR - 1.2e-52 163.9 0.1 1.4e-52 163.7 0.1 1.0 1 0 0 1 1 1 1 Human beta hemoglobin.\nHBB_HUMAN - HBBL_RANCA - 1.5e-57 180.0 0.1 1.7e-57 179.9 0.1 1.0 1 0 0 1 1 1 1 Human beta hemoglobin.\nHBB_HUMAN - HBB2_TRICR - 3.4e-46 143.0 0.0 3.7e-46 142.8 0.0 1.0 1 0 0 1 1 1 1 Human beta hemoglobin.\n#\n# Program: phmmer\n# Version: 3.2 (June 2018)\n# Pipeline mode: SEARCH\n# Query file: /var/lib/cwl/stgc72dd3bc-8891-4b83-83e7-215178692be8/globins45.fa\n# Target file: /var/lib/cwl/stgf46f4fb0-f7ec-4fbf-b608-74ca6d8a20a0/HBB_HUMAN\n# Option settings: phmmer -o globins45.fa.phmmer_matches.out --tblout globins45.fa.phmmer_matches.tblout /var/lib/cwl/stgc72dd3bc-8891-4b83-83e7-215178692be8/globins45.fa /var/lib/cwl/stgf46f4fb0-f7ec-4fbf-b608-74ca6d8a20a0/HBB_HUMAN \n# Current dir: /tmp/cwl\n# Date: Tue Jul 17 13:01:19 2018\n# [ok]" [INFO] [stdout] stack backtrace: [INFO] [stdout] 0: 0x643c754dba82 - std::backtrace_rs::backtrace::libunwind::trace::ha50a1f28c7a10cf8 [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/std/src/../../backtrace/src/backtrace/libunwind.rs:117:9 [INFO] [stdout] 1: 0x643c754dba82 - std::backtrace_rs::backtrace::trace_unsynchronized::h34f8c4ec82a320bc [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/std/src/../../backtrace/src/backtrace/mod.rs:66:14 [INFO] [stdout] 2: 0x643c754dba82 - std::sys::backtrace::_print_fmt::h2d23e84e13d343bc [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/std/src/sys/backtrace.rs:66:9 [INFO] [stdout] 3: 0x643c754dba82 - ::fmt::hde21067283f7e82e [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/std/src/sys/backtrace.rs:39:26 [INFO] [stdout] 4: 0x643c754eca5f - core::fmt::rt::Argument::fmt::he65307037dca33c6 [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/core/src/fmt/rt.rs:173:76 [INFO] [stdout] 5: 0x643c754eca5f - core::fmt::write::h24186904251c31cb [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/core/src/fmt/mod.rs:1469:25 [INFO] [stdout] 6: 0x643c754a9633 - std::io::default_write_fmt::h4e8d11c5c4b9cafe [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/std/src/io/mod.rs:639:11 [INFO] [stdout] 7: 0x643c754a9633 - std::io::Write::write_fmt::ha849be0824d095ef [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/std/src/io/mod.rs:1954:13 [INFO] [stdout] 8: 0x643c754b52e2 - std::sys::backtrace::BacktraceLock::print::he038489aba5894a6 [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/std/src/sys/backtrace.rs:42:9 [INFO] [stdout] 9: 0x643c754b9dbf - std::panicking::default_hook::{{closure}}::h80a26d916c49679b [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/std/src/panicking.rs:301:27 [INFO] [stdout] 10: 0x643c754b9c51 - std::panicking::default_hook::he2e9efee79b3dce9 [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/std/src/panicking.rs:325:9 [INFO] [stdout] 11: 0x643c7547cd7e - as core::ops::function::Fn>::call::h202f496763929329 [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/alloc/src/boxed.rs:2099:9 [INFO] [stdout] 12: 0x643c7547cd7e - test::test_main_with_exit_callback::{{closure}}::h805a6913adddaea3 [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/test/src/lib.rs:145:21 [INFO] [stdout] 13: 0x643c754ba3cf - as core::ops::function::Fn>::call::h2883c9d2dbd4e81c [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/alloc/src/boxed.rs:2099:9 [INFO] [stdout] 14: 0x643c754ba3cf - std::panicking::panic_with_hook::hf5648b7cec6bc73e [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/std/src/panicking.rs:842:13 [INFO] [stdout] 15: 0x643c754ba22a - std::panicking::panic_handler::{{closure}}::h1b2ed3864ba94359 [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/std/src/panicking.rs:707:13 [INFO] [stdout] 16: 0x643c754b5419 - std::sys::backtrace::__rust_end_short_backtrace::hd0186b2b27f5aaa7 [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/std/src/sys/backtrace.rs:174:18 [INFO] [stdout] 17: 0x643c7549dc6d - __rustc[f7dae8b92efe1d7a]::rust_begin_unwind [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/std/src/panicking.rs:698:5 [INFO] [stdout] 18: 0x643c754f5a70 - core::panicking::panic_fmt::hb5d6b83773432920 [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/core/src/panicking.rs:80:14 [INFO] [stdout] 19: 0x643c754f5873 - core::panicking::assert_failed_inner::ha59fbb70905830e9 [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/core/src/panicking.rs:444:17 [INFO] [stdout] 20: 0x643c75459855 - core::panicking::assert_failed::hd3cf502022d04a9a [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/core/src/panicking.rs:399:5 [INFO] [stdout] 21: 0x643c7544f585 - hmm_tblout::tests::in_same_as_out::hf1386fe577a2aa5a [INFO] [stdout] at /opt/rustwide/workdir/src/lib.rs:327:9 [INFO] [stdout] 22: 0x643c7544f757 - hmm_tblout::tests::in_same_as_out::{{closure}}::h2763289bcfaacade [INFO] [stdout] at /opt/rustwide/workdir/src/lib.rs:309:24 [INFO] [stdout] 23: 0x643c7543d6d6 - core::ops::function::FnOnce::call_once::h14eaa7101fc56f4d [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/core/src/ops/function.rs:250:5 [INFO] [stdout] 24: 0x643c7547cbeb - core::ops::function::FnOnce::call_once::h3a2d82edd1a9b770 [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/core/src/ops/function.rs:250:5 [INFO] [stdout] 25: 0x643c7547cbeb - test::__rust_begin_short_backtrace::h85d4fe5033219107 [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/test/src/lib.rs:663:18 [INFO] [stdout] 26: 0x643c75490bdd - test::run_test_in_process::{{closure}}::h67b48a81b9c9d7b6 [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/test/src/lib.rs:686:74 [INFO] [stdout] 27: 0x643c75490bdd - as core::ops::function::FnOnce<()>>::call_once::h7680585480377cb5 [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/core/src/panic/unwind_safe.rs:274:9 [INFO] [stdout] 28: 0x643c75490bdd - std::panicking::catch_unwind::do_call::hf71351b2657d4002 [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/std/src/panicking.rs:590:40 [INFO] [stdout] 29: 0x643c75490bdd - std::panicking::catch_unwind::h7fcb5c0312d9e172 [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/std/src/panicking.rs:553:19 [INFO] [stdout] 30: 0x643c75490bdd - std::panic::catch_unwind::h5cf3c9bdee894ebe [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/std/src/panic.rs:359:14 [INFO] [stdout] 31: 0x643c75490bdd - test::run_test_in_process::h1469cb85193a3a25 [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/test/src/lib.rs:686:27 [INFO] [stdout] 32: 0x643c75490bdd - test::run_test::{{closure}}::h59d45b3cd6453d69 [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/test/src/lib.rs:607:43 [INFO] [stdout] 33: 0x643c7546a124 - test::run_test::{{closure}}::h9baa0c3d443f28c9 [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/test/src/lib.rs:637:41 [INFO] [stdout] 34: 0x643c7546a124 - std::sys::backtrace::__rust_begin_short_backtrace::h97ea8cee4828663e [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/std/src/sys/backtrace.rs:158:18 [INFO] [stdout] 35: 0x643c7546d97a - std::thread::Builder::spawn_unchecked_::{{closure}}::{{closure}}::h5d7539d5f78cee61 [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/std/src/thread/mod.rs:562:17 [INFO] [stdout] 36: 0x643c7546d97a - as core::ops::function::FnOnce<()>>::call_once::he4c551e23c5e9b22 [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/core/src/panic/unwind_safe.rs:274:9 [INFO] [stdout] 37: 0x643c7546d97a - std::panicking::catch_unwind::do_call::h522b41a6c157aaba [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/std/src/panicking.rs:590:40 [INFO] [stdout] 38: 0x643c7546d97a - std::panicking::catch_unwind::h0efbf72006b8e365 [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/std/src/panicking.rs:553:19 [INFO] [stdout] 39: 0x643c7546d97a - std::panic::catch_unwind::h3b081041e6c97066 [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/std/src/panic.rs:359:14 [INFO] [stdout] 40: 0x643c7546d97a - std::thread::Builder::spawn_unchecked_::{{closure}}::ha751309815d5d8cf [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/std/src/thread/mod.rs:560:30 [INFO] [stdout] 41: 0x643c7546d97a - core::ops::function::FnOnce::call_once{{vtable.shim}}::h2084b887a5fe25a7 [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/core/src/ops/function.rs:250:5 [INFO] [stdout] 42: 0x643c754b081f - as core::ops::function::FnOnce>::call_once::h3adbd6ccf5f737af [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/alloc/src/boxed.rs:2085:9 [INFO] [stdout] 43: 0x643c754b081f - std::sys::thread::unix::Thread::new::thread_start::hb3dc6483caa1b987 [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/std/src/sys/thread/unix.rs:124:17 [INFO] [stdout] 44: 0x78964ad26aa4 - [INFO] [stdout] 45: 0x78964adb3a64 - clone [INFO] [stdout] 46: 0x0 - [INFO] [stdout] [INFO] [stdout] ---- tests::in_same_as_out_n stdout ---- [INFO] [stdout] [INFO] [stdout] thread 'tests::in_same_as_out_n' (27) panicked at src/lib.rs:353:9: [INFO] [stdout] assertion `left == right` failed [INFO] [stdout] left: "# target name accession query name accession hmmfrom hmm to alifrom ali to envfrom env to sq len strand E-value score bias description of target\n#------------------- ---------- -------------------- ---------- ------- ------- ------- ------- ------- ------- ------- ------ --------- ------ ----- ---------------------\nSUPER_1 - TR - 1 315 10988331 10987997 10988331 10987995 52766903 - 6.5e-34 124.1 1.2 - \nSUPER_3 - TR - 139 204 17951382 17951472 17951359 17951492 49366223 + 7.4e-1 15.6 3 - \nSUPER_4 - TR - 29 130 20542008 20542119 20541989 20542141 47284787 + 1.1e0 15.1 5.7 - \nSUPER_4 - TR - 29 126 32993383 32993283 32993398 32993263 47284787 - 2.2e0 14.1 1 - \nSUPER_4 - TR - 23 126 14861076 14861174 14861063 14861195 47284787 + 2.4e0 13.9 3.4 - \nSUPER_5 - TR - 21 126 27641355 27641256 27641369 27641229 46997258 - 2.5e0 13.8 6.5 - \nSUPER_8 - TR - 158 191 33162494 33162454 33162514 33162446 33878543 - 3.1e0 13.6 2 - \nSUPER_5 - TR - 107 162 46228956 46228885 46228975 46228876 46997258 - 3.1e0 13.6 0 - \nSUPER_1 - TR - 68 173 15697438 15697327 15697464 15697325 52766903 - 4.4e0 13.1 0.7 - \nSUPER_3 - TR - 24 128 36147201 36147098 36147221 36147078 49366223 - 4.5e0 13 1.9 - \nSUPER_1 - TR - 1 84 36988055 36987966 36988055 36987944 52766903 - 4.7e0 13 2.1 - \nSUPER_6 - TR - 38 122 20863320 20863225 20863338 20863202 43664244 - 5e0 12.9 2.2 - \nSUPER_8 - TR - 1 79 32349659 32349576 32349659 32349556 33878543 - 5.9e0 12.6 2.5 - \nSUPER_2 - TR - 22 128 38320620 38320502 38320631 38320480 52745556 - 6.5e0 12.5 0 - \nSUPER_1 - TR - 2 55 1602497 1602446 1602498 1602420 52766903 - 8.6e0 12.1 7.2 - \nSUPER_2 - TR - 2 100 26735237 26735139 26735238 26735122 52745556 - 9e0 12 1.4 - \n#\n# Program: nhmmer\n# Version: 3.4 (Aug 2023)\n# Pipeline mode: SEARCH\n# Query file: TR.hmm\n# Target file: /lustre/scratch124/tol/projects/darwin/data/dicots/Misopates_orontium/assembly/curated/daMisOron1.1/daMisOron1.1.primary.fa.gz\n# Options: /software/team301/hmmer-3.4/src/nhmmer --tblout Misopates_orontium.tbl --dna --cpu 10 TR.hmm /lustre/scratch124/tol/projects/darwin/data/dicots/Misopates_orontium/assembly/curated/daMisOron1.1/daMisOron1.1.primary.fa.gz\n# Current dir: /lustre/scratch123/tol/teams/blaxter/users/mb39/ARU/tr_detection\n# Date: Fri May 3 10:07:36 2024\n# [ok]" [INFO] [stdout] right: "# target name accession query name accession hmmfrom hmm to alifrom ali to envfrom env to sq len strand E-value score bias description of target\n#------------------- ---------- -------------------- ---------- ------- ------- ------- ------- ------- ------- ------- ------ --------- ------ ----- ---------------------\nSUPER_1 - TR - 1 315 10988331 10987997 10988331 10987995 52766903 - 6.5e-34 124.1 1.2 -\nSUPER_3 - TR - 139 204 17951382 17951472 17951359 17951492 49366223 + 0.74 15.6 3.0 -\nSUPER_4 - TR - 29 130 20542008 20542119 20541989 20542141 47284787 + 1.1 15.1 5.7 -\nSUPER_4 - TR - 29 126 32993383 32993283 32993398 32993263 47284787 - 2.2 14.1 1.0 -\nSUPER_4 - TR - 23 126 14861076 14861174 14861063 14861195 47284787 + 2.4 13.9 3.4 -\nSUPER_5 - TR - 21 126 27641355 27641256 27641369 27641229 46997258 - 2.5 13.8 6.5 -\nSUPER_8 - TR - 158 191 33162494 33162454 33162514 33162446 33878543 - 3.1 13.6 2.0 -\nSUPER_5 - TR - 107 162 46228956 46228885 46228975 46228876 46997258 - 3.1 13.6 0.0 -\nSUPER_1 - TR - 68 173 15697438 15697327 15697464 15697325 52766903 - 4.4 13.1 0.7 -\nSUPER_3 - TR - 24 128 36147201 36147098 36147221 36147078 49366223 - 4.5 13.0 1.9 -\nSUPER_1 - TR - 1 84 36988055 36987966 36988055 36987944 52766903 - 4.7 13.0 2.1 -\nSUPER_6 - TR - 38 122 20863320 20863225 20863338 20863202 43664244 - 5 12.9 2.2 -\nSUPER_8 - TR - 1 79 32349659 32349576 32349659 32349556 33878543 - 5.9 12.6 2.5 -\nSUPER_2 - TR - 22 128 38320620 38320502 38320631 38320480 52745556 - 6.5 12.5 0.0 -\nSUPER_1 - TR - 2 55 1602497 1602446 1602498 1602420 52766903 - 8.6 12.1 7.2 -\nSUPER_2 - TR - 2 100 26735237 26735139 26735238 26735122 52745556 - 9 12.0 1.4 -\n#\n# Program: nhmmer\n# Version: 3.4 (Aug 2023)\n# Pipeline mode: SEARCH\n# Query file: TR.hmm\n# Target file: /lustre/scratch124/tol/projects/darwin/data/dicots/Misopates_orontium/assembly/curated/daMisOron1.1/daMisOron1.1.primary.fa.gz\n# Option settings: /software/team301/hmmer-3.4/src/nhmmer --tblout Misopates_orontium.tbl --dna --cpu 10 TR.hmm /lustre/scratch124/tol/projects/darwin/data/dicots/Misopates_orontium/assembly/curated/daMisOron1.1/daMisOron1.1.primary.fa.gz\n# Current dir: /lustre/scratch123/tol/teams/blaxter/users/mb39/ARU/tr_detection\n# Date: Fri May 3 10:07:36 2024\n# [ok]" [INFO] [stdout] stack backtrace: [INFO] [stdout] 0: 0x643c754dba82 - std::backtrace_rs::backtrace::libunwind::trace::ha50a1f28c7a10cf8 [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/std/src/../../backtrace/src/backtrace/libunwind.rs:117:9 [INFO] [stdout] 1: 0x643c754dba82 - std::backtrace_rs::backtrace::trace_unsynchronized::h34f8c4ec82a320bc [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/std/src/../../backtrace/src/backtrace/mod.rs:66:14 [INFO] [stdout] 2: 0x643c754dba82 - std::sys::backtrace::_print_fmt::h2d23e84e13d343bc [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/std/src/sys/backtrace.rs:66:9 [INFO] [stdout] 3: 0x643c754dba82 - ::fmt::hde21067283f7e82e [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/std/src/sys/backtrace.rs:39:26 [INFO] [stdout] 4: 0x643c754eca5f - core::fmt::rt::Argument::fmt::he65307037dca33c6 [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/core/src/fmt/rt.rs:173:76 [INFO] [stdout] 5: 0x643c754eca5f - core::fmt::write::h24186904251c31cb [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/core/src/fmt/mod.rs:1469:25 [INFO] [stdout] 6: 0x643c754a9633 - std::io::default_write_fmt::h4e8d11c5c4b9cafe [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/std/src/io/mod.rs:639:11 [INFO] [stdout] 7: 0x643c754a9633 - std::io::Write::write_fmt::ha849be0824d095ef [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/std/src/io/mod.rs:1954:13 [INFO] [stdout] 8: 0x643c754b52e2 - std::sys::backtrace::BacktraceLock::print::he038489aba5894a6 [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/std/src/sys/backtrace.rs:42:9 [INFO] [stdout] 9: 0x643c754b9dbf - std::panicking::default_hook::{{closure}}::h80a26d916c49679b [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/std/src/panicking.rs:301:27 [INFO] [stdout] 10: 0x643c754b9c51 - std::panicking::default_hook::he2e9efee79b3dce9 [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/std/src/panicking.rs:325:9 [INFO] [stdout] 11: 0x643c7547cd7e - as core::ops::function::Fn>::call::h202f496763929329 [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/alloc/src/boxed.rs:2099:9 [INFO] [stdout] 12: 0x643c7547cd7e - test::test_main_with_exit_callback::{{closure}}::h805a6913adddaea3 [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/test/src/lib.rs:145:21 [INFO] [stdout] 13: 0x643c754ba3cf - as core::ops::function::Fn>::call::h2883c9d2dbd4e81c [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/alloc/src/boxed.rs:2099:9 [INFO] [stdout] 14: 0x643c754ba3cf - std::panicking::panic_with_hook::hf5648b7cec6bc73e [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/std/src/panicking.rs:842:13 [INFO] [stdout] 15: 0x643c754ba22a - std::panicking::panic_handler::{{closure}}::h1b2ed3864ba94359 [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/std/src/panicking.rs:707:13 [INFO] [stdout] 16: 0x643c754b5419 - std::sys::backtrace::__rust_end_short_backtrace::hd0186b2b27f5aaa7 [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/std/src/sys/backtrace.rs:174:18 [INFO] [stdout] 17: 0x643c7549dc6d - __rustc[f7dae8b92efe1d7a]::rust_begin_unwind [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/std/src/panicking.rs:698:5 [INFO] [stdout] 18: 0x643c754f5a70 - core::panicking::panic_fmt::hb5d6b83773432920 [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/core/src/panicking.rs:80:14 [INFO] [stdout] 19: 0x643c754f5873 - core::panicking::assert_failed_inner::ha59fbb70905830e9 [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/core/src/panicking.rs:444:17 [INFO] [stdout] 20: 0x643c75459855 - core::panicking::assert_failed::hd3cf502022d04a9a [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/core/src/panicking.rs:399:5 [INFO] [stdout] 21: 0x643c75450546 - hmm_tblout::tests::in_same_as_out_n::hf210a02a4e21c9b6 [INFO] [stdout] at /opt/rustwide/workdir/src/lib.rs:353:9 [INFO] [stdout] 22: 0x643c75450717 - hmm_tblout::tests::in_same_as_out_n::{{closure}}::h5bc1c55cfc48beab [INFO] [stdout] at /opt/rustwide/workdir/src/lib.rs:335:26 [INFO] [stdout] 23: 0x643c7543d916 - core::ops::function::FnOnce::call_once::h71a71ed1d843b985 [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/core/src/ops/function.rs:250:5 [INFO] [stdout] 24: 0x643c7547cbeb - core::ops::function::FnOnce::call_once::h3a2d82edd1a9b770 [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/core/src/ops/function.rs:250:5 [INFO] [stdout] 25: 0x643c7547cbeb - test::__rust_begin_short_backtrace::h85d4fe5033219107 [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/test/src/lib.rs:663:18 [INFO] [stdout] 26: 0x643c75490bdd - test::run_test_in_process::{{closure}}::h67b48a81b9c9d7b6 [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/test/src/lib.rs:686:74 [INFO] [stdout] 27: 0x643c75490bdd - as core::ops::function::FnOnce<()>>::call_once::h7680585480377cb5 [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/core/src/panic/unwind_safe.rs:274:9 [INFO] [stdout] 28: 0x643c75490bdd - std::panicking::catch_unwind::do_call::hf71351b2657d4002 [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/std/src/panicking.rs:590:40 [INFO] [stdout] 29: 0x643c75490bdd - std::panicking::catch_unwind::h7fcb5c0312d9e172 [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/std/src/panicking.rs:553:19 [INFO] [stdout] 30: 0x643c75490bdd - std::panic::catch_unwind::h5cf3c9bdee894ebe [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/std/src/panic.rs:359:14 [INFO] [stdout] 31: 0x643c75490bdd - test::run_test_in_process::h1469cb85193a3a25 [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/test/src/lib.rs:686:27 [INFO] [stdout] 32: 0x643c75490bdd - test::run_test::{{closure}}::h59d45b3cd6453d69 [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/test/src/lib.rs:607:43 [INFO] [stdout] 33: 0x643c7546a124 - test::run_test::{{closure}}::h9baa0c3d443f28c9 [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/test/src/lib.rs:637:41 [INFO] [stdout] 34: 0x643c7546a124 - std::sys::backtrace::__rust_begin_short_backtrace::h97ea8cee4828663e [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/std/src/sys/backtrace.rs:158:18 [INFO] [stdout] 35: 0x643c7546d97a - std::thread::Builder::spawn_unchecked_::{{closure}}::{{closure}}::h5d7539d5f78cee61 [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/std/src/thread/mod.rs:562:17 [INFO] [stdout] 36: 0x643c7546d97a - as core::ops::function::FnOnce<()>>::call_once::he4c551e23c5e9b22 [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/core/src/panic/unwind_safe.rs:274:9 [INFO] [stdout] 37: 0x643c7546d97a - std::panicking::catch_unwind::do_call::h522b41a6c157aaba [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/std/src/panicking.rs:590:40 [INFO] [stdout] 38: 0x643c7546d97a - std::panicking::catch_unwind::h0efbf72006b8e365 [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/std/src/panicking.rs:553:19 [INFO] [stdout] 39: 0x643c7546d97a - std::panic::catch_unwind::h3b081041e6c97066 [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/std/src/panic.rs:359:14 [INFO] [stdout] 40: 0x643c7546d97a - std::thread::Builder::spawn_unchecked_::{{closure}}::ha751309815d5d8cf [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/std/src/thread/mod.rs:560:30 [INFO] [stdout] 41: 0x643c7546d97a - core::ops::function::FnOnce::call_once{{vtable.shim}}::h2084b887a5fe25a7 [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/core/src/ops/function.rs:250:5 [INFO] [stdout] 42: 0x643c754b081f - as core::ops::function::FnOnce>::call_once::h3adbd6ccf5f737af [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/alloc/src/boxed.rs:2085:9 [INFO] [stdout] 43: 0x643c754b081f - std::sys::thread::unix::Thread::new::thread_start::hb3dc6483caa1b987 [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/std/src/sys/thread/unix.rs:124:17 [INFO] [stdout] 44: 0x78964ad26aa4 - [INFO] [stdout] 45: 0x78964adb3a64 - clone [INFO] [stdout] 46: 0x0 - [INFO] [stdout] [INFO] [stdout] ---- tests::test_phmmer_write stdout ---- [INFO] [stdout] [INFO] [stdout] thread 'tests::test_phmmer_write' (34) panicked at src/lib.rs:300:9: [INFO] [stdout] assertion `left == right` failed [INFO] [stdout] left: "HBB_HUMAN - MYG_ESCGI - 2.3e-11 30.3 0.1 2.5e-11 30.2 0.1 1.0 1 0 0 1 1 1 1 Human beta hemoglobin.\n" [INFO] [stdout] right: "HBB_HUMAN - MYG_ESCGI - 2.30e-11 30.30 0.10 2.50e-11 30.20 0.10 1.00 1 0 0 1 1 1 1 Human beta hemoglobin.\n" [INFO] [stdout] stack backtrace: [INFO] [stdout] 0: 0x643c754dba82 - std::backtrace_rs::backtrace::libunwind::trace::ha50a1f28c7a10cf8 [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/std/src/../../backtrace/src/backtrace/libunwind.rs:117:9 [INFO] [stdout] 1: 0x643c754dba82 - std::backtrace_rs::backtrace::trace_unsynchronized::h34f8c4ec82a320bc [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/std/src/../../backtrace/src/backtrace/mod.rs:66:14 [INFO] [stdout] 2: 0x643c754dba82 - std::sys::backtrace::_print_fmt::h2d23e84e13d343bc [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/std/src/sys/backtrace.rs:66:9 [INFO] [stdout] 3: 0x643c754dba82 - ::fmt::hde21067283f7e82e [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/std/src/sys/backtrace.rs:39:26 [INFO] [stdout] 4: 0x643c754eca5f - core::fmt::rt::Argument::fmt::he65307037dca33c6 [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/core/src/fmt/rt.rs:173:76 [INFO] [stdout] 5: 0x643c754eca5f - core::fmt::write::h24186904251c31cb [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/core/src/fmt/mod.rs:1469:25 [INFO] [stdout] 6: 0x643c754a9633 - std::io::default_write_fmt::h4e8d11c5c4b9cafe [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/std/src/io/mod.rs:639:11 [INFO] [stdout] 7: 0x643c754a9633 - std::io::Write::write_fmt::ha849be0824d095ef [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/std/src/io/mod.rs:1954:13 [INFO] [stdout] 8: 0x643c754b52e2 - std::sys::backtrace::BacktraceLock::print::he038489aba5894a6 [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/std/src/sys/backtrace.rs:42:9 [INFO] [stdout] 9: 0x643c754b9dbf - std::panicking::default_hook::{{closure}}::h80a26d916c49679b [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/std/src/panicking.rs:301:27 [INFO] [stdout] 10: 0x643c754b9c51 - std::panicking::default_hook::he2e9efee79b3dce9 [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/std/src/panicking.rs:325:9 [INFO] [stdout] 11: 0x643c7547cd7e - as core::ops::function::Fn>::call::h202f496763929329 [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/alloc/src/boxed.rs:2099:9 [INFO] [stdout] 12: 0x643c7547cd7e - test::test_main_with_exit_callback::{{closure}}::h805a6913adddaea3 [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/test/src/lib.rs:145:21 [INFO] [stdout] 13: 0x643c754ba3cf - as core::ops::function::Fn>::call::h2883c9d2dbd4e81c [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/alloc/src/boxed.rs:2099:9 [INFO] [stdout] 14: 0x643c754ba3cf - std::panicking::panic_with_hook::hf5648b7cec6bc73e [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/std/src/panicking.rs:842:13 [INFO] [stdout] 15: 0x643c754ba22a - std::panicking::panic_handler::{{closure}}::h1b2ed3864ba94359 [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/std/src/panicking.rs:707:13 [INFO] [stdout] 16: 0x643c754b5419 - std::sys::backtrace::__rust_end_short_backtrace::hd0186b2b27f5aaa7 [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/std/src/sys/backtrace.rs:174:18 [INFO] [stdout] 17: 0x643c7549dc6d - __rustc[f7dae8b92efe1d7a]::rust_begin_unwind [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/std/src/panicking.rs:698:5 [INFO] [stdout] 18: 0x643c754f5a70 - core::panicking::panic_fmt::hb5d6b83773432920 [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/core/src/panicking.rs:80:14 [INFO] [stdout] 19: 0x643c754f5873 - core::panicking::assert_failed_inner::ha59fbb70905830e9 [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/core/src/panicking.rs:444:17 [INFO] [stdout] 20: 0x643c75459855 - core::panicking::assert_failed::hd3cf502022d04a9a [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/core/src/panicking.rs:399:5 [INFO] [stdout] 21: 0x643c75450ec0 - hmm_tblout::tests::test_phmmer_write::h8b09bdaf0a529f1b [INFO] [stdout] at /opt/rustwide/workdir/src/lib.rs:300:9 [INFO] [stdout] 22: 0x643c75450f47 - hmm_tblout::tests::test_phmmer_write::{{closure}}::hb04e76078fc1ecec [INFO] [stdout] at /opt/rustwide/workdir/src/lib.rs:285:27 [INFO] [stdout] 23: 0x643c7543d796 - core::ops::function::FnOnce::call_once::h31be1a39192f5bb3 [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/core/src/ops/function.rs:250:5 [INFO] [stdout] 24: 0x643c7547cbeb - core::ops::function::FnOnce::call_once::h3a2d82edd1a9b770 [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/core/src/ops/function.rs:250:5 [INFO] [stdout] 25: 0x643c7547cbeb - test::__rust_begin_short_backtrace::h85d4fe5033219107 [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/test/src/lib.rs:663:18 [INFO] [stdout] 26: 0x643c75490bdd - test::run_test_in_process::{{closure}}::h67b48a81b9c9d7b6 [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/test/src/lib.rs:686:74 [INFO] [stdout] 27: 0x643c75490bdd - as core::ops::function::FnOnce<()>>::call_once::h7680585480377cb5 [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/core/src/panic/unwind_safe.rs:274:9 [INFO] [stdout] 28: 0x643c75490bdd - std::panicking::catch_unwind::do_call::hf71351b2657d4002 [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/std/src/panicking.rs:590:40 [INFO] [stdout] 29: 0x643c75490bdd - std::panicking::catch_unwind::h7fcb5c0312d9e172 [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/std/src/panicking.rs:553:19 [INFO] [stdout] 30: 0x643c75490bdd - std::panic::catch_unwind::h5cf3c9bdee894ebe [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/std/src/panic.rs:359:14 [INFO] [stdout] 31: 0x643c75490bdd - test::run_test_in_process::h1469cb85193a3a25 [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/test/src/lib.rs:686:27 [INFO] [stdout] 32: 0x643c75490bdd - test::run_test::{{closure}}::h59d45b3cd6453d69 [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/test/src/lib.rs:607:43 [INFO] [stdout] 33: 0x643c7546a124 - test::run_test::{{closure}}::h9baa0c3d443f28c9 [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/test/src/lib.rs:637:41 [INFO] [stdout] 34: 0x643c7546a124 - std::sys::backtrace::__rust_begin_short_backtrace::h97ea8cee4828663e [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/std/src/sys/backtrace.rs:158:18 [INFO] [stdout] 35: 0x643c7546d97a - std::thread::Builder::spawn_unchecked_::{{closure}}::{{closure}}::h5d7539d5f78cee61 [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/std/src/thread/mod.rs:562:17 [INFO] [stdout] 36: 0x643c7546d97a - as core::ops::function::FnOnce<()>>::call_once::he4c551e23c5e9b22 [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/core/src/panic/unwind_safe.rs:274:9 [INFO] [stdout] 37: 0x643c7546d97a - std::panicking::catch_unwind::do_call::h522b41a6c157aaba [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/std/src/panicking.rs:590:40 [INFO] [stdout] 38: 0x643c7546d97a - std::panicking::catch_unwind::h0efbf72006b8e365 [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/std/src/panicking.rs:553:19 [INFO] [stdout] 39: 0x643c7546d97a - std::panic::catch_unwind::h3b081041e6c97066 [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/std/src/panic.rs:359:14 [INFO] [stdout] 40: 0x643c7546d97a - std::thread::Builder::spawn_unchecked_::{{closure}}::ha751309815d5d8cf [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/std/src/thread/mod.rs:560:30 [INFO] [stdout] 41: 0x643c7546d97a - core::ops::function::FnOnce::call_once{{vtable.shim}}::h2084b887a5fe25a7 [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/core/src/ops/function.rs:250:5 [INFO] [stdout] 42: 0x643c754b081f - as core::ops::function::FnOnce>::call_once::h3adbd6ccf5f737af [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/alloc/src/boxed.rs:2085:9 [INFO] [stdout] 43: 0x643c754b081f - std::sys::thread::unix::Thread::new::thread_start::hb3dc6483caa1b987 [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/std/src/sys/thread/unix.rs:124:17 [INFO] [stdout] 44: 0x78964ad26aa4 - [INFO] [stdout] 45: 0x78964adb3a64 - clone [INFO] [stdout] 46: 0x0 - [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] failures: [INFO] [stdout] tests::in_same_as_out [INFO] [stdout] tests::in_same_as_out_n [INFO] [stdout] tests::test_phmmer_write [INFO] [stdout] [INFO] [stdout] test result: FAILED. 7 passed; 3 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.09s [INFO] [stdout] [INFO] running `Command { std: "docker" "inspect" "b3c2a186be3d2e3ce43f92f688c2d10700a7de34834e5163218636aab7d3d468", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "b3c2a186be3d2e3ce43f92f688c2d10700a7de34834e5163218636aab7d3d468", kill_on_drop: false }` [INFO] [stdout] b3c2a186be3d2e3ce43f92f688c2d10700a7de34834e5163218636aab7d3d468