[INFO] fetching crate gskits 0.15.15... [INFO] testing gskits-0.15.15 against master#c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38 for pr-146098-7 [INFO] extracting crate gskits 0.15.15 into /workspace/builds/worker-7-tc1/source [INFO] started tweaking crates.io crate gskits 0.15.15 [INFO] finished tweaking crates.io crate gskits 0.15.15 [INFO] tweaked toml for crates.io crate gskits 0.15.15 written to /workspace/builds/worker-7-tc1/source/Cargo.toml [INFO] validating manifest of crates.io crate gskits 0.15.15 on toolchain c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38 [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] crate crates.io crate gskits 0.15.15 already has a lockfile, it will not be regenerated [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] Updating crates.io index [INFO] [stderr] Downloading crates ... [INFO] [stderr] Downloaded sha1_smol v1.0.1 [INFO] [stderr] Downloaded windows-interface v0.57.0 [INFO] [stderr] Downloaded editdistancek v1.0.2 [INFO] [stderr] Downloaded anyhow v1.0.97 [INFO] [stderr] Downloaded feature-probe v0.1.1 [INFO] [stderr] Downloaded icu_properties v1.5.1 [INFO] [stderr] Downloaded bv v0.11.1 [INFO] [stderr] Downloaded synstructure v0.13.1 [INFO] [stderr] Downloaded fs-utils v1.1.4 [INFO] [stderr] Downloaded ieee754 v0.2.6 [INFO] [stderr] Downloaded cmake v0.1.54 [INFO] [stderr] Downloaded write16 v1.0.0 [INFO] [stderr] Downloaded linear-map v1.2.0 [INFO] [stderr] Downloaded semver v0.1.20 [INFO] [stderr] Downloaded lazycell v1.3.0 [INFO] [stderr] Downloaded icu_locid_transform v1.5.0 [INFO] [stderr] Downloaded icu_provider_macros v1.5.0 [INFO] [stderr] Downloaded ordered-float v5.0.0 [INFO] [stderr] Downloaded derive-new v0.6.0 [INFO] [stderr] Downloaded enum-map v2.7.3 [INFO] [stderr] Downloaded enum-map-derive v0.17.0 [INFO] [stderr] Downloaded fixedbitset v0.5.7 [INFO] [stderr] Downloaded portable-atomic-util v0.2.4 [INFO] [stderr] Downloaded matrixmultiply v0.3.9 [INFO] [stderr] Downloaded rand v0.9.0 [INFO] [stderr] Downloaded hashbrown v0.15.2 [INFO] [stderr] Downloaded libm v0.2.11 [INFO] [stderr] Downloaded statrs v0.18.0 [INFO] [stderr] Downloaded criterion v0.3.6 [INFO] [stderr] Downloaded rayon v1.10.0 [INFO] [stderr] Downloaded portable-atomic v1.11.0 [INFO] [stderr] Downloaded bio v2.2.0 [INFO] [stderr] Downloaded zerocopy v0.8.24 [INFO] [stderr] Downloaded chrono v0.4.40 [INFO] [stderr] Downloaded unicode-width v0.2.0 [INFO] [stderr] Downloaded ndarray v0.16.1 [INFO] [stderr] Downloaded bindgen v0.69.5 [INFO] [stderr] Downloaded icu_properties_data v1.5.1 [INFO] [stderr] Downloaded zerovec v0.10.4 [INFO] [stderr] Downloaded nalgebra v0.33.2 [INFO] [stderr] Downloaded idna v1.0.3 [INFO] [stderr] Downloaded objc2-core-foundation v0.3.0 [INFO] [stderr] Downloaded wide v0.7.32 [INFO] [stderr] Downloaded rayon-core v1.12.1 [INFO] [stderr] Downloaded openssl-sys v0.9.107 [INFO] [stderr] Downloaded bytemuck v1.22.0 [INFO] [stderr] Downloaded zerocopy-derive v0.8.24 [INFO] [stderr] Downloaded serde_cbor v0.11.2 [INFO] [stderr] Downloaded icu_collections v1.5.0 [INFO] [stderr] Downloaded bzip2-sys v0.1.13+1.0.8 [INFO] [stderr] Downloaded ntapi v0.4.1 [INFO] [stderr] Downloaded simba v0.9.0 [INFO] [stderr] Downloaded libloading v0.8.6 [INFO] [stderr] Downloaded url v2.5.4 [INFO] [stderr] Downloaded web-sys v0.3.77 [INFO] [stderr] Downloaded triple_accel v0.4.0 [INFO] [stderr] Downloaded libc v0.2.171 [INFO] [stderr] Downloaded windows-core v0.61.0 [INFO] [stderr] Downloaded petgraph v0.7.1 [INFO] [stderr] Downloaded lzma-sys v0.1.20 [INFO] [stderr] Downloaded csv-core v0.1.12 [INFO] [stderr] Downloaded num_cpus v1.16.0 [INFO] [stderr] Downloaded rustversion v1.0.20 [INFO] [stderr] Downloaded bio-types v1.0.4 [INFO] [stderr] Downloaded derive-new v0.7.0 [INFO] [stderr] Downloaded getrandom v0.3.2 [INFO] [stderr] Downloaded icu_normalizer_data v1.5.1 [INFO] [stderr] Downloaded csv v1.3.1 [INFO] [stderr] Downloaded itertools-num v0.1.3 [INFO] [stderr] Downloaded multimap v0.10.0 [INFO] [stderr] Downloaded windows-result v0.3.2 [INFO] [stderr] Downloaded windows-strings v0.4.0 [INFO] [stderr] Downloaded winapi-util v0.1.9 [INFO] [stderr] Downloaded icu_normalizer v1.5.0 [INFO] [stderr] Downloaded icu_locid_transform_data v1.5.1 [INFO] [stderr] Downloaded icu_locid v1.5.0 [INFO] [stderr] Downloaded icu_provider v1.5.0 [INFO] [stderr] Downloaded litemap v0.7.5 [INFO] [stderr] Downloaded yoke-derive v0.7.5 [INFO] [stderr] Downloaded yoke v0.7.5 [INFO] [stderr] Downloaded writeable v0.5.5 [INFO] [stderr] Downloaded tinystr v0.7.6 [INFO] [stderr] Downloaded idna_adapter v1.2.0 [INFO] [stderr] Downloaded sysinfo v0.34.2 [INFO] [stderr] Downloaded syn v2.0.100 [INFO] [stderr] Downloaded rustc_version v0.1.7 [INFO] [stderr] Downloaded newtype_derive v0.1.6 [INFO] [stderr] Downloaded utf16_iter v1.0.5 [INFO] [stderr] Downloaded rust-htslib v0.49.0 [INFO] [stderr] Downloaded bitflags v2.9.0 [INFO] [stderr] Downloaded cc v1.2.18 [INFO] [stderr] Downloaded windows-core v0.57.0 [INFO] [stderr] Downloaded uuid v1.16.0 [INFO] [stderr] Downloaded bytecount v0.6.8 [INFO] [stderr] Downloaded criterion-plot v0.4.5 [INFO] [stderr] Downloaded half v1.8.3 [INFO] [stderr] Downloaded custom_derive v0.1.7 [INFO] [stderr] Downloaded zerovec-derive v0.10.3 [INFO] [stderr] Downloaded windows-implement v0.57.0 [INFO] [stderr] Downloaded windows-result v0.1.2 [INFO] [stderr] Downloaded proc-macro2 v1.0.94 [INFO] [stderr] Downloaded curl-sys v0.4.80+curl-8.12.1 [INFO] [stderr] Downloaded hts-sys v2.2.0 [INFO] [stderr] Downloaded windows v0.57.0 [INFO] [stderr] Downloaded openssl-src v300.5.0+3.5.0 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-7-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-7-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:4848fb76d95f26979359cc7e45710b1dbc8f3acb7aeedee7c460d7702230f228" "/opt/rustwide/cargo-home/bin/cargo" "+c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] 798a997a69a0fbcae0f7214d87cc6c23f933a5d06a94d372f62988c7ea17df9e [INFO] running `Command { std: "docker" "start" "-a" "798a997a69a0fbcae0f7214d87cc6c23f933a5d06a94d372f62988c7ea17df9e", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "798a997a69a0fbcae0f7214d87cc6c23f933a5d06a94d372f62988c7ea17df9e", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "798a997a69a0fbcae0f7214d87cc6c23f933a5d06a94d372f62988c7ea17df9e", kill_on_drop: false }` [INFO] [stdout] 798a997a69a0fbcae0f7214d87cc6c23f933a5d06a94d372f62988c7ea17df9e [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-7-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-7-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:4848fb76d95f26979359cc7e45710b1dbc8f3acb7aeedee7c460d7702230f228" "/opt/rustwide/cargo-home/bin/cargo" "+c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38" "build" "--frozen" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] 22a16ad0b7013d3dbbff4711fe05aa1115366be2d25b9f06d004d2976923bff0 [INFO] running `Command { std: "docker" "start" "-a" "22a16ad0b7013d3dbbff4711fe05aa1115366be2d25b9f06d004d2976923bff0", kill_on_drop: false }` [INFO] [stderr] Compiling proc-macro2 v1.0.94 [INFO] [stderr] Compiling unicode-ident v1.0.18 [INFO] [stderr] Compiling libc v0.2.171 [INFO] [stderr] Compiling cfg-if v1.0.0 [INFO] [stderr] Compiling autocfg v1.4.0 [INFO] [stderr] Compiling pkg-config v0.3.32 [INFO] [stderr] Compiling libm v0.2.11 [INFO] [stderr] Compiling stable_deref_trait v1.2.0 [INFO] [stderr] Compiling zerocopy v0.8.24 [INFO] [stderr] Compiling vcpkg v0.2.15 [INFO] [stderr] Compiling memchr v2.7.4 [INFO] [stderr] Compiling writeable v0.5.5 [INFO] [stderr] Compiling icu_locid_transform_data v1.5.1 [INFO] [stderr] Compiling litemap v0.7.5 [INFO] [stderr] Compiling glob v0.3.2 [INFO] [stderr] Compiling icu_properties_data v1.5.1 [INFO] [stderr] Compiling icu_normalizer_data v1.5.1 [INFO] [stderr] Compiling minimal-lexical v0.2.1 [INFO] [stderr] Compiling serde v1.0.219 [INFO] [stderr] Compiling lazy_static v1.5.0 [INFO] [stderr] Compiling regex-syntax v0.8.5 [INFO] [stderr] Compiling num-traits v0.2.19 [INFO] [stderr] Compiling matrixmultiply v0.3.9 [INFO] [stderr] Compiling libloading v0.8.6 [INFO] [stderr] Compiling getrandom v0.3.2 [INFO] [stderr] Compiling bindgen v0.69.5 [INFO] [stderr] Compiling rustversion v1.0.20 [INFO] [stderr] Compiling paste v1.0.15 [INFO] [stderr] Compiling bytemuck v1.22.0 [INFO] [stderr] Compiling nom v7.1.3 [INFO] [stderr] Compiling semver v0.1.20 [INFO] [stderr] Compiling either v1.15.0 [INFO] [stderr] Compiling safe_arch v0.7.4 [INFO] [stderr] Compiling itertools v0.12.1 [INFO] [stderr] Compiling rustc_version v0.1.7 [INFO] [stderr] Compiling smallvec v1.15.0 [INFO] [stderr] Compiling bitflags v2.9.0 [INFO] [stderr] Compiling clang-sys v1.8.1 [INFO] [stderr] Compiling rustc-hash v1.1.0 [INFO] [stderr] Compiling quick-error v1.2.3 [INFO] [stderr] Compiling write16 v1.0.0 [INFO] [stderr] Compiling thiserror v1.0.69 [INFO] [stderr] Compiling utf16_iter v1.0.5 [INFO] [stderr] Compiling lazycell v1.3.0 [INFO] [stderr] Compiling quote v1.0.40 [INFO] [stderr] Compiling aho-corasick v1.1.3 [INFO] [stderr] Compiling regex-automata v0.4.9 [INFO] [stderr] Compiling typenum v1.18.0 [INFO] [stderr] Compiling rawpointer v0.2.1 [INFO] [stderr] Compiling newtype_derive v0.1.6 [INFO] [stderr] Compiling jobserver v0.1.33 [INFO] [stderr] Compiling getrandom v0.2.15 [INFO] [stderr] Compiling syn v2.0.100 [INFO] [stderr] Compiling rand_core v0.6.4 [INFO] [stderr] Compiling fs-utils v1.1.4 [INFO] [stderr] Compiling num-complex v0.4.6 [INFO] [stderr] Compiling cc v1.2.18 [INFO] [stderr] Compiling num-integer v0.1.46 [INFO] [stderr] Compiling approx v0.5.1 [INFO] [stderr] Compiling wide v0.7.32 [INFO] [stderr] Compiling ppv-lite86 v0.2.21 [INFO] [stderr] Compiling heck v0.5.0 [INFO] [stderr] Compiling feature-probe v0.1.1 [INFO] [stderr] Compiling thiserror v2.0.12 [INFO] [stderr] Compiling num-rational v0.4.2 [INFO] [stderr] Compiling rand_core v0.9.3 [INFO] [stderr] Compiling bv v0.11.1 [INFO] [stderr] Compiling rand_chacha v0.3.1 [INFO] [stderr] Compiling hashbrown v0.15.2 [INFO] [stderr] Compiling anyhow v1.0.97 [INFO] [stderr] Compiling cexpr v0.6.0 [INFO] [stderr] Compiling percent-encoding v2.3.1 [INFO] [stderr] Compiling byteorder v1.5.0 [INFO] [stderr] Compiling rand v0.8.5 [INFO] [stderr] Compiling portable-atomic v1.11.0 [INFO] [stderr] Compiling form_urlencoded v1.2.1 [INFO] [stderr] Compiling rand_chacha v0.9.0 [INFO] [stderr] Compiling csv-core v0.1.12 [INFO] [stderr] Compiling bit-vec v0.8.0 [INFO] [stderr] Compiling unicode-width v0.2.0 [INFO] [stderr] Compiling custom_derive v0.1.7 [INFO] [stderr] Compiling fixedbitset v0.5.7 [INFO] [stderr] Compiling cmake v0.1.54 [INFO] [stderr] Compiling openssl-src v300.5.0+3.5.0 [INFO] [stderr] Compiling indexmap v2.9.0 [INFO] [stderr] Compiling console v0.15.11 [INFO] [stderr] Compiling itertools v0.14.0 [INFO] [stderr] Compiling bit-set v0.8.0 [INFO] [stderr] Compiling regex v1.11.1 [INFO] [stderr] Compiling simba v0.9.0 [INFO] [stderr] Compiling rand_distr v0.4.3 [INFO] [stderr] Compiling rand v0.9.0 [INFO] [stderr] Compiling fxhash v0.2.1 [INFO] [stderr] Compiling ndarray v0.16.1 [INFO] [stderr] Compiling tracing-core v0.1.33 [INFO] [stderr] Compiling itertools-num v0.1.3 [INFO] [stderr] Compiling petgraph v0.7.1 [INFO] [stderr] Compiling ordered-float v5.0.0 [INFO] [stderr] Compiling editdistancek v1.0.2 [INFO] [stderr] Compiling ieee754 v0.2.6 [INFO] [stderr] Compiling sha1_smol v1.0.1 [INFO] [stderr] Compiling strum v0.26.3 [INFO] [stderr] Compiling libz-sys v1.1.22 [INFO] [stderr] Compiling openssl-sys v0.9.107 [INFO] [stderr] Compiling bzip2-sys v0.1.13+1.0.8 [INFO] [stderr] Compiling lzma-sys v0.1.20 [INFO] [stderr] Compiling curl-sys v0.4.80+curl-8.12.1 [INFO] [stderr] Compiling linear-map v1.2.0 [INFO] [stderr] Compiling triple_accel v0.4.0 [INFO] [stderr] Compiling bytecount v0.6.8 [INFO] [stderr] Compiling iana-time-zone v0.1.63 [INFO] [stderr] Compiling number_prefix v0.4.0 [INFO] [stderr] Compiling uuid v1.16.0 [INFO] [stderr] Compiling indicatif v0.17.11 [INFO] [stderr] Compiling chrono v0.4.40 [INFO] [stderr] Compiling sysinfo v0.34.2 [INFO] [stderr] Compiling num_cpus v1.16.0 [INFO] [stderr] Compiling synstructure v0.13.1 [INFO] [stderr] Compiling zerofrom-derive v0.1.6 [INFO] [stderr] Compiling yoke-derive v0.7.5 [INFO] [stderr] Compiling zerovec-derive v0.10.3 [INFO] [stderr] Compiling displaydoc v0.2.5 [INFO] [stderr] Compiling icu_provider_macros v1.5.0 [INFO] [stderr] Compiling serde_derive v1.0.219 [INFO] [stderr] Compiling thiserror-impl v1.0.69 [INFO] [stderr] Compiling thiserror-impl v2.0.12 [INFO] [stderr] Compiling derive-new v0.6.0 [INFO] [stderr] Compiling strum_macros v0.26.4 [INFO] [stderr] Compiling enum-map-derive v0.17.0 [INFO] [stderr] Compiling derive-new v0.7.0 [INFO] [stderr] Compiling tracing-attributes v0.1.28 [INFO] [stderr] Compiling enum-map v2.7.3 [INFO] [stderr] Compiling zerofrom v0.1.6 [INFO] [stderr] Compiling yoke v0.7.5 [INFO] [stderr] Compiling bio-types v1.0.4 [INFO] [stderr] Compiling zerovec v0.10.4 [INFO] [stderr] Compiling tracing v0.1.41 [INFO] [stderr] Compiling nalgebra v0.33.2 [INFO] [stderr] Compiling tinystr v0.7.6 [INFO] [stderr] Compiling icu_collections v1.5.0 [INFO] [stderr] Compiling icu_locid v1.5.0 [INFO] [stderr] Compiling icu_provider v1.5.0 [INFO] [stderr] Compiling icu_locid_transform v1.5.0 [INFO] [stderr] Compiling hts-sys v2.2.0 [INFO] [stderr] Compiling icu_properties v1.5.1 [INFO] [stderr] Compiling icu_normalizer v1.5.0 [INFO] [stderr] Compiling vec_map v0.8.2 [INFO] [stderr] Compiling multimap v0.10.0 [INFO] [stderr] Compiling csv v1.3.1 [INFO] [stderr] Compiling idna_adapter v1.2.0 [INFO] [stderr] Compiling idna v1.0.3 [INFO] [stderr] Compiling url v2.5.4 [INFO] [stderr] Compiling statrs v0.18.0 [INFO] [stderr] Compiling bio v2.2.0 [INFO] [stderr] Compiling rust-htslib v0.49.0 [INFO] [stderr] Compiling gskits v0.15.15 (/opt/rustwide/workdir) [INFO] [stderr] Finished `dev` profile [unoptimized + debuginfo] target(s) in 3m 14s [INFO] running `Command { std: "docker" "inspect" "22a16ad0b7013d3dbbff4711fe05aa1115366be2d25b9f06d004d2976923bff0", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "22a16ad0b7013d3dbbff4711fe05aa1115366be2d25b9f06d004d2976923bff0", kill_on_drop: false }` [INFO] [stdout] 22a16ad0b7013d3dbbff4711fe05aa1115366be2d25b9f06d004d2976923bff0 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-7-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-7-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:4848fb76d95f26979359cc7e45710b1dbc8f3acb7aeedee7c460d7702230f228" "/opt/rustwide/cargo-home/bin/cargo" "+c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] adfdea06067d0980004b4f8a467a81ac0ae0af8a43427a2f6665a069d8a87a81 [INFO] running `Command { std: "docker" "start" "-a" "adfdea06067d0980004b4f8a467a81ac0ae0af8a43427a2f6665a069d8a87a81", kill_on_drop: false }` [INFO] [stderr] Compiling crossbeam-utils v0.8.21 [INFO] [stderr] Compiling serde_json v1.0.140 [INFO] [stderr] Compiling rayon-core v1.12.1 [INFO] [stderr] Compiling unicode-width v0.1.14 [INFO] [stderr] Compiling plotters-backend v0.3.7 [INFO] [stderr] Compiling itertools v0.10.5 [INFO] [stderr] Compiling same-file v1.0.6 [INFO] [stderr] Compiling bitflags v1.3.2 [INFO] [stderr] Compiling cast v0.3.0 [INFO] [stderr] Compiling half v1.8.3 [INFO] [stderr] Compiling atty v0.2.14 [INFO] [stderr] Compiling oorandom v11.1.5 [INFO] [stderr] Compiling textwrap v0.11.0 [INFO] [stderr] Compiling plotters-svg v0.3.7 [INFO] [stderr] Compiling clap v2.34.0 [INFO] [stderr] Compiling walkdir v2.5.0 [INFO] [stderr] Compiling plotters v0.3.7 [INFO] [stderr] Compiling serde_cbor v0.11.2 [INFO] [stderr] Compiling crossbeam-epoch v0.9.18 [INFO] [stderr] Compiling tinytemplate v1.2.1 [INFO] [stderr] Compiling crossbeam-deque v0.8.6 [INFO] [stderr] Compiling rayon v1.10.0 [INFO] [stderr] Compiling criterion-plot v0.4.5 [INFO] [stderr] Compiling criterion v0.3.6 [INFO] [stderr] Compiling gskits v0.15.15 (/opt/rustwide/workdir) [INFO] [stderr] Finished `test` profile [unoptimized + debuginfo] target(s) in 18.60s [INFO] running `Command { std: "docker" "inspect" "adfdea06067d0980004b4f8a467a81ac0ae0af8a43427a2f6665a069d8a87a81", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "adfdea06067d0980004b4f8a467a81ac0ae0af8a43427a2f6665a069d8a87a81", kill_on_drop: false }` [INFO] [stdout] adfdea06067d0980004b4f8a467a81ac0ae0af8a43427a2f6665a069d8a87a81 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-7-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-7-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:4848fb76d95f26979359cc7e45710b1dbc8f3acb7aeedee7c460d7702230f228" "/opt/rustwide/cargo-home/bin/cargo" "+c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38" "test" "--frozen", kill_on_drop: false }` [INFO] [stdout] 754f9ef12bb07a9c22dbecfe3e597bae2d2fee998070247ffa272dd0a76ae486 [INFO] running `Command { std: "docker" "start" "-a" "754f9ef12bb07a9c22dbecfe3e597bae2d2fee998070247ffa272dd0a76ae486", kill_on_drop: false }` [INFO] [stderr] Finished `test` profile [unoptimized + debuginfo] target(s) in 0.22s [INFO] [stderr] Running unittests src/lib.rs (/opt/rustwide/target/debug/deps/gskits-a3dcb78981dcbf25) [INFO] [stdout] [INFO] [stdout] running 28 tests [INFO] [stdout] test ds::region::test::test_calcute_gaps ... ok [INFO] [stdout] test dna::test::test_reverse_complement ... ok [INFO] [stdout] test ds::region::test::test_calcute_overlap_metrics ... ok [INFO] [stdout] test gsbam::cigar_ext::tests::test_edge_cases ... ok [INFO] [stdout] test dna::test::test_bio_alpha ... ok [INFO] [stdout] test gsbam::cigar_ext::tests::test_ideneity_special_case ... ok [INFO] [stdout] test gsbam::cigar_ext::tests::test_long_ins_regions_in_query ... ok [INFO] [stdout] test gsbam::cigar_ext::tests::test_parse_cigar_str ... ok [INFO] [stdout] test gsbam::cigar_ext::tests::test_range_identity ... ok [INFO] [stdout] test phreq::test::test_phreq_list_2_quality ... ok [INFO] [stdout] test gsbam::plp_counts_from_records::test::test_region_plp_cnts ... ok [INFO] [stdout] test gsbam::plp_counts_from_records::test::test_plp_cnts_with_blacklist ... ok [INFO] [stdout] test phreq::test::test_phreq_list_2_quality_list ... ok [INFO] [stdout] test phreq::test::test_phreq_list_2_err_list ... ok [INFO] [stdout] test gsbam::plp_counts_from_records::test::test_test_plp_using_aligned_pairs_with_right_soft_clip ... ok [INFO] [stdout] test matrix::transpose::test::test_transpose ... ok [INFO] [stdout] test matrix::transpose::test::test_transpose_blocked ... ok [INFO] [stdout] test gsbam::plp_counts_from_records::test::test_plp_cnts ... ok [INFO] [stdout] test ds::test::test_read_info ... ok [INFO] [stdout] test phreq::test::test_phreq2quality ... ok [INFO] [stdout] test gsbam::plp_counts_from_records::test::test_test_plp_using_aligned_pairs_with_indel ... ok [INFO] [stdout] test phreq::test::test_quality_2_phreq ... ok [INFO] [stdout] test poly_n::test::test_find_homopolymer_regions ... ok [INFO] [stdout] test test::test_alphabet ... ok [INFO] [stdout] test utils::test::test_range_parser ... ok [INFO] [stdout] test gsbam::bam_header_ext::test::test_header_ext ... FAILED [INFO] [stdout] test gsbam::bam_header_ext::test::test_rg_rn_mapping ... FAILED [INFO] [stdout] test gsbam::plp_counts_from_records::test::test_plp_within_region ... FAILED [INFO] [stdout] [INFO] [stdout] failures: [INFO] [stdout] [INFO] [stdout] ---- gsbam::bam_header_ext::test::test_header_ext stdout ---- [INFO] [stdout] [INFO] [stdout] thread 'gsbam::bam_header_ext::test::test_header_ext' (30) panicked at src/gsbam/bam_header_ext.rs:155:89: [INFO] [stdout] called `Result::unwrap()` on an `Err` value: FileNotFound { path: "test_data/header_only.bam" } [INFO] [stdout] stack backtrace: [INFO] [stdout] 0: 0x56abd20bcb12 - std::backtrace_rs::backtrace::libunwind::trace::ha50a1f28c7a10cf8 [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/std/src/../../backtrace/src/backtrace/libunwind.rs:117:9 [INFO] [stdout] 1: 0x56abd20bcb12 - std::backtrace_rs::backtrace::trace_unsynchronized::h34f8c4ec82a320bc [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/std/src/../../backtrace/src/backtrace/mod.rs:66:14 [INFO] [stdout] 2: 0x56abd20bcb12 - std::sys::backtrace::_print_fmt::h2d23e84e13d343bc [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/std/src/sys/backtrace.rs:66:9 [INFO] [stdout] 3: 0x56abd20bcb12 - ::fmt::hde21067283f7e82e [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/std/src/sys/backtrace.rs:39:26 [INFO] [stdout] 4: 0x56abd20ce12f - core::fmt::rt::Argument::fmt::he65307037dca33c6 [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/core/src/fmt/rt.rs:173:76 [INFO] [stdout] 5: 0x56abd20ce12f - core::fmt::write::h24186904251c31cb [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/core/src/fmt/mod.rs:1469:25 [INFO] [stdout] 6: 0x56abd208a593 - std::io::default_write_fmt::h4e8d11c5c4b9cafe [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/std/src/io/mod.rs:639:11 [INFO] [stdout] 7: 0x56abd208a593 - std::io::Write::write_fmt::ha849be0824d095ef [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/std/src/io/mod.rs:1954:13 [INFO] [stdout] 8: 0x56abd2096202 - std::sys::backtrace::BacktraceLock::print::he038489aba5894a6 [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/std/src/sys/backtrace.rs:42:9 [INFO] [stdout] 9: 0x56abd209adaf - std::panicking::default_hook::{{closure}}::h80a26d916c49679b [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/std/src/panicking.rs:301:27 [INFO] [stdout] 10: 0x56abd209ac41 - std::panicking::default_hook::he2e9efee79b3dce9 [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/std/src/panicking.rs:325:9 [INFO] [stdout] 11: 0x56abd1939e9e - as core::ops::function::Fn>::call::h202f496763929329 [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/alloc/src/boxed.rs:2099:9 [INFO] [stdout] 12: 0x56abd1939e9e - test::test_main_with_exit_callback::{{closure}}::h805a6913adddaea3 [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/test/src/lib.rs:145:21 [INFO] [stdout] 13: 0x56abd209b3bf - as core::ops::function::Fn>::call::h2883c9d2dbd4e81c [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/alloc/src/boxed.rs:2099:9 [INFO] [stdout] 14: 0x56abd209b3bf - std::panicking::panic_with_hook::hf5648b7cec6bc73e [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/std/src/panicking.rs:842:13 [INFO] [stdout] 15: 0x56abd209b21a - std::panicking::panic_handler::{{closure}}::h1b2ed3864ba94359 [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/std/src/panicking.rs:707:13 [INFO] [stdout] 16: 0x56abd2096349 - std::sys::backtrace::__rust_end_short_backtrace::hd0186b2b27f5aaa7 [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/std/src/sys/backtrace.rs:174:18 [INFO] [stdout] 17: 0x56abd207ec2d - __rustc[f7dae8b92efe1d7a]::rust_begin_unwind [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/std/src/panicking.rs:698:5 [INFO] [stdout] 18: 0x56abd20d7ff0 - core::panicking::panic_fmt::hb5d6b83773432920 [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/core/src/panicking.rs:80:14 [INFO] [stdout] 19: 0x56abd20d73b6 - core::result::unwrap_failed::h427ee4a8bb06d8af [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/core/src/result.rs:1862:5 [INFO] [stdout] 20: 0x56abd18f6bc5 - core::result::Result::unwrap::h39513da766f9ca5d [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/core/src/result.rs:1233:23 [INFO] [stdout] 21: 0x56abd18f6bc5 - gskits::gsbam::bam_header_ext::test::test_header_ext::h6acd22f90cacda76 [INFO] [stdout] at /opt/rustwide/workdir/src/gsbam/bam_header_ext.rs:155:89 [INFO] [stdout] 22: 0x56abd18f6e17 - gskits::gsbam::bam_header_ext::test::test_header_ext::{{closure}}::he789ffe622a35a8f [INFO] [stdout] at /opt/rustwide/workdir/src/gsbam/bam_header_ext.rs:154:25 [INFO] [stdout] 23: 0x56abd19000e6 - core::ops::function::FnOnce::call_once::h8c193998541a486d [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/core/src/ops/function.rs:250:5 [INFO] [stdout] 24: 0x56abd1939d0b - core::ops::function::FnOnce::call_once::h3a2d82edd1a9b770 [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/core/src/ops/function.rs:250:5 [INFO] [stdout] 25: 0x56abd1939d0b - test::__rust_begin_short_backtrace::h85d4fe5033219107 [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/test/src/lib.rs:663:18 [INFO] [stdout] 26: 0x56abd194dcfd - test::run_test_in_process::{{closure}}::h67b48a81b9c9d7b6 [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/test/src/lib.rs:686:74 [INFO] [stdout] 27: 0x56abd194dcfd - as core::ops::function::FnOnce<()>>::call_once::h7680585480377cb5 [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/core/src/panic/unwind_safe.rs:274:9 [INFO] [stdout] 28: 0x56abd194dcfd - std::panicking::catch_unwind::do_call::hf71351b2657d4002 [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/std/src/panicking.rs:590:40 [INFO] [stdout] 29: 0x56abd194dcfd - std::panicking::catch_unwind::h7fcb5c0312d9e172 [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/std/src/panicking.rs:553:19 [INFO] [stdout] 30: 0x56abd194dcfd - std::panic::catch_unwind::h5cf3c9bdee894ebe [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/std/src/panic.rs:359:14 [INFO] [stdout] 31: 0x56abd194dcfd - test::run_test_in_process::h1469cb85193a3a25 [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/test/src/lib.rs:686:27 [INFO] [stdout] 32: 0x56abd194dcfd - test::run_test::{{closure}}::h59d45b3cd6453d69 [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/test/src/lib.rs:607:43 [INFO] [stdout] 33: 0x56abd1927244 - test::run_test::{{closure}}::h9baa0c3d443f28c9 [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/test/src/lib.rs:637:41 [INFO] [stdout] 34: 0x56abd1927244 - std::sys::backtrace::__rust_begin_short_backtrace::h97ea8cee4828663e [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/std/src/sys/backtrace.rs:158:18 [INFO] [stdout] 35: 0x56abd192aa9a - std::thread::Builder::spawn_unchecked_::{{closure}}::{{closure}}::h5d7539d5f78cee61 [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/std/src/thread/mod.rs:562:17 [INFO] [stdout] 36: 0x56abd192aa9a - as core::ops::function::FnOnce<()>>::call_once::he4c551e23c5e9b22 [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/core/src/panic/unwind_safe.rs:274:9 [INFO] [stdout] 37: 0x56abd192aa9a - std::panicking::catch_unwind::do_call::h522b41a6c157aaba [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/std/src/panicking.rs:590:40 [INFO] [stdout] 38: 0x56abd192aa9a - std::panicking::catch_unwind::h0efbf72006b8e365 [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/std/src/panicking.rs:553:19 [INFO] [stdout] 39: 0x56abd192aa9a - std::panic::catch_unwind::h3b081041e6c97066 [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/std/src/panic.rs:359:14 [INFO] [stdout] 40: 0x56abd192aa9a - std::thread::Builder::spawn_unchecked_::{{closure}}::ha751309815d5d8cf [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/std/src/thread/mod.rs:560:30 [INFO] [stdout] 41: 0x56abd192aa9a - core::ops::function::FnOnce::call_once{{vtable.shim}}::h2084b887a5fe25a7 [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/core/src/ops/function.rs:250:5 [INFO] [stdout] 42: 0x56abd209173f - as core::ops::function::FnOnce>::call_once::h3adbd6ccf5f737af [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/alloc/src/boxed.rs:2085:9 [INFO] [stdout] 43: 0x56abd209173f - std::sys::thread::unix::Thread::new::thread_start::hb3dc6483caa1b987 [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/std/src/sys/thread/unix.rs:124:17 [INFO] [stdout] 44: 0x7dd61d737aa4 - [INFO] [stdout] 45: 0x7dd61d7c4a64 - clone [INFO] [stdout] 46: 0x0 - [INFO] [stdout] [INFO] [stdout] ---- gsbam::bam_header_ext::test::test_rg_rn_mapping stdout ---- [INFO] [stdout] [INFO] [stdout] thread 'gsbam::bam_header_ext::test::test_rg_rn_mapping' (31) panicked at src/gsbam/bam_header_ext.rs:166:89: [INFO] [stdout] called `Result::unwrap()` on an `Err` value: FileNotFound { path: "test_data/header_only.bam" } [INFO] [stdout] stack backtrace: [INFO] [stdout] 0: 0x56abd20bcb12 - std::backtrace_rs::backtrace::libunwind::trace::ha50a1f28c7a10cf8 [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/std/src/../../backtrace/src/backtrace/libunwind.rs:117:9 [INFO] [stdout] 1: 0x56abd20bcb12 - std::backtrace_rs::backtrace::trace_unsynchronized::h34f8c4ec82a320bc [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/std/src/../../backtrace/src/backtrace/mod.rs:66:14 [INFO] [stdout] 2: 0x56abd20bcb12 - std::sys::backtrace::_print_fmt::h2d23e84e13d343bc [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/std/src/sys/backtrace.rs:66:9 [INFO] [stdout] 3: 0x56abd20bcb12 - ::fmt::hde21067283f7e82e [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/std/src/sys/backtrace.rs:39:26 [INFO] [stdout] 4: 0x56abd20ce12f - core::fmt::rt::Argument::fmt::he65307037dca33c6 [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/core/src/fmt/rt.rs:173:76 [INFO] [stdout] 5: 0x56abd20ce12f - core::fmt::write::h24186904251c31cb [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/core/src/fmt/mod.rs:1469:25 [INFO] [stdout] 6: 0x56abd208a593 - std::io::default_write_fmt::h4e8d11c5c4b9cafe [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/std/src/io/mod.rs:639:11 [INFO] [stdout] 7: 0x56abd208a593 - std::io::Write::write_fmt::ha849be0824d095ef [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/std/src/io/mod.rs:1954:13 [INFO] [stdout] 8: 0x56abd2096202 - std::sys::backtrace::BacktraceLock::print::he038489aba5894a6 [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/std/src/sys/backtrace.rs:42:9 [INFO] [stdout] 9: 0x56abd209adaf - std::panicking::default_hook::{{closure}}::h80a26d916c49679b [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/std/src/panicking.rs:301:27 [INFO] [stdout] 10: 0x56abd209ac41 - std::panicking::default_hook::he2e9efee79b3dce9 [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/std/src/panicking.rs:325:9 [INFO] [stdout] 11: 0x56abd1939e9e - as core::ops::function::Fn>::call::h202f496763929329 [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/alloc/src/boxed.rs:2099:9 [INFO] [stdout] 12: 0x56abd1939e9e - test::test_main_with_exit_callback::{{closure}}::h805a6913adddaea3 [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/test/src/lib.rs:145:21 [INFO] [stdout] 13: 0x56abd209b3bf - as core::ops::function::Fn>::call::h2883c9d2dbd4e81c [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/alloc/src/boxed.rs:2099:9 [INFO] [stdout] 14: 0x56abd209b3bf - std::panicking::panic_with_hook::hf5648b7cec6bc73e [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/std/src/panicking.rs:842:13 [INFO] [stdout] 15: 0x56abd209b21a - std::panicking::panic_handler::{{closure}}::h1b2ed3864ba94359 [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/std/src/panicking.rs:707:13 [INFO] [stdout] 16: 0x56abd2096349 - std::sys::backtrace::__rust_end_short_backtrace::hd0186b2b27f5aaa7 [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/std/src/sys/backtrace.rs:174:18 [INFO] [stdout] 17: 0x56abd207ec2d - __rustc[f7dae8b92efe1d7a]::rust_begin_unwind [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/std/src/panicking.rs:698:5 [INFO] [stdout] 18: 0x56abd20d7ff0 - core::panicking::panic_fmt::hb5d6b83773432920 [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/core/src/panicking.rs:80:14 [INFO] [stdout] 19: 0x56abd20d73b6 - core::result::unwrap_failed::h427ee4a8bb06d8af [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/core/src/result.rs:1862:5 [INFO] [stdout] 20: 0x56abd18f6ec5 - core::result::Result::unwrap::h39513da766f9ca5d [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/core/src/result.rs:1233:23 [INFO] [stdout] 21: 0x56abd18f6ec5 - gskits::gsbam::bam_header_ext::test::test_rg_rn_mapping::h6cd3b8164b14261a [INFO] [stdout] at /opt/rustwide/workdir/src/gsbam/bam_header_ext.rs:166:89 [INFO] [stdout] 22: 0x56abd18f70a7 - gskits::gsbam::bam_header_ext::test::test_rg_rn_mapping::{{closure}}::h05b368d3d5a303eb [INFO] [stdout] at /opt/rustwide/workdir/src/gsbam/bam_header_ext.rs:165:28 [INFO] [stdout] 23: 0x56abd18ffcd6 - core::ops::function::FnOnce::call_once::h54fd9b57bfc7df9e [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/core/src/ops/function.rs:250:5 [INFO] [stdout] 24: 0x56abd1939d0b - core::ops::function::FnOnce::call_once::h3a2d82edd1a9b770 [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/core/src/ops/function.rs:250:5 [INFO] [stdout] 25: 0x56abd1939d0b - test::__rust_begin_short_backtrace::h85d4fe5033219107 [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/test/src/lib.rs:663:18 [INFO] [stdout] 26: 0x56abd194dcfd - test::run_test_in_process::{{closure}}::h67b48a81b9c9d7b6 [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/test/src/lib.rs:686:74 [INFO] [stdout] 27: 0x56abd194dcfd - as core::ops::function::FnOnce<()>>::call_once::h7680585480377cb5 [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/core/src/panic/unwind_safe.rs:274:9 [INFO] [stdout] 28: 0x56abd194dcfd - std::panicking::catch_unwind::do_call::hf71351b2657d4002 [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/std/src/panicking.rs:590:40 [INFO] [stdout] 29: 0x56abd194dcfd - std::panicking::catch_unwind::h7fcb5c0312d9e172 [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/std/src/panicking.rs:553:19 [INFO] [stdout] 30: 0x56abd194dcfd - std::panic::catch_unwind::h5cf3c9bdee894ebe [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/std/src/panic.rs:359:14 [INFO] [stdout] 31: 0x56abd194dcfd - test::run_test_in_process::h1469cb85193a3a25 [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/test/src/lib.rs:686:27 [INFO] [stdout] 32: 0x56abd194dcfd - test::run_test::{{closure}}::h59d45b3cd6453d69 [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/test/src/lib.rs:607:43 [INFO] [stdout] 33: 0x56abd1927244 - test::run_test::{{closure}}::h9baa0c3d443f28c9 [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/test/src/lib.rs:637:41 [INFO] [stdout] 34: 0x56abd1927244 - std::sys::backtrace::__rust_begin_short_backtrace::h97ea8cee4828663e [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/std/src/sys/backtrace.rs:158:18 [INFO] [stdout] 35: 0x56abd192aa9a - std::thread::Builder::spawn_unchecked_::{{closure}}::{{closure}}::h5d7539d5f78cee61 [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/std/src/thread/mod.rs:562:17 [INFO] [stdout] 36: 0x56abd192aa9a - as core::ops::function::FnOnce<()>>::call_once::he4c551e23c5e9b22 [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/core/src/panic/unwind_safe.rs:274:9 [INFO] [stdout] 37: 0x56abd192aa9a - std::panicking::catch_unwind::do_call::h522b41a6c157aaba [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/std/src/panicking.rs:590:40 [INFO] [stdout] 38: 0x56abd192aa9a - std::panicking::catch_unwind::h0efbf72006b8e365 [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/std/src/panicking.rs:553:19 [INFO] [stdout] 39: 0x56abd192aa9a - std::panic::catch_unwind::h3b081041e6c97066 [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/std/src/panic.rs:359:14 [INFO] [stdout] 40: 0x56abd192aa9a - std::thread::Builder::spawn_unchecked_::{{closure}}::ha751309815d5d8cf [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/std/src/thread/mod.rs:560:30 [INFO] [stdout] 41: 0x56abd192aa9a - core::ops::function::FnOnce::call_once{{vtable.shim}}::h2084b887a5fe25a7 [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/core/src/ops/function.rs:250:5 [INFO] [stdout] 42: 0x56abd209173f - as core::ops::function::FnOnce>::call_once::h3adbd6ccf5f737af [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/alloc/src/boxed.rs:2085:9 [INFO] [stdout] 43: 0x56abd209173f - std::sys::thread::unix::Thread::new::thread_start::hb3dc6483caa1b987 [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/std/src/sys/thread/unix.rs:124:17 [INFO] [stdout] 44: 0x7dd61d737aa4 - [INFO] [stdout] 45: 0x7dd61d7c4a64 - clone [INFO] [stdout] 46: 0x0 - [INFO] [stdout] [INFO] [stdout] ---- gsbam::plp_counts_from_records::test::test_plp_within_region stdout ---- [INFO] [stdout] [INFO] [stdout] thread 'gsbam::plp_counts_from_records::test::test_plp_within_region' (39) panicked at src/gsbam/plp_counts_from_records.rs:612:84: [INFO] [stdout] called `Result::unwrap()` on an `Err` value: FileNotFound { path: "test_data/sbr2smc.aligned.bam" } [INFO] [stdout] stack backtrace: [INFO] [stdout] 0: 0x56abd20bcb12 - std::backtrace_rs::backtrace::libunwind::trace::ha50a1f28c7a10cf8 [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/std/src/../../backtrace/src/backtrace/libunwind.rs:117:9 [INFO] [stdout] 1: 0x56abd20bcb12 - std::backtrace_rs::backtrace::trace_unsynchronized::h34f8c4ec82a320bc [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/std/src/../../backtrace/src/backtrace/mod.rs:66:14 [INFO] [stdout] 2: 0x56abd20bcb12 - std::sys::backtrace::_print_fmt::h2d23e84e13d343bc [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/std/src/sys/backtrace.rs:66:9 [INFO] [stdout] 3: 0x56abd20bcb12 - ::fmt::hde21067283f7e82e [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/std/src/sys/backtrace.rs:39:26 [INFO] [stdout] 4: 0x56abd20ce12f - core::fmt::rt::Argument::fmt::he65307037dca33c6 [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/core/src/fmt/rt.rs:173:76 [INFO] [stdout] 5: 0x56abd20ce12f - core::fmt::write::h24186904251c31cb [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/core/src/fmt/mod.rs:1469:25 [INFO] [stdout] 6: 0x56abd208a593 - std::io::default_write_fmt::h4e8d11c5c4b9cafe [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/std/src/io/mod.rs:639:11 [INFO] [stdout] 7: 0x56abd208a593 - std::io::Write::write_fmt::ha849be0824d095ef [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/std/src/io/mod.rs:1954:13 [INFO] [stdout] 8: 0x56abd2096202 - std::sys::backtrace::BacktraceLock::print::he038489aba5894a6 [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/std/src/sys/backtrace.rs:42:9 [INFO] [stdout] 9: 0x56abd209adaf - std::panicking::default_hook::{{closure}}::h80a26d916c49679b [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/std/src/panicking.rs:301:27 [INFO] [stdout] 10: 0x56abd209ac41 - std::panicking::default_hook::he2e9efee79b3dce9 [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/std/src/panicking.rs:325:9 [INFO] [stdout] 11: 0x56abd1939e9e - as core::ops::function::Fn>::call::h202f496763929329 [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/alloc/src/boxed.rs:2099:9 [INFO] [stdout] 12: 0x56abd1939e9e - test::test_main_with_exit_callback::{{closure}}::h805a6913adddaea3 [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/test/src/lib.rs:145:21 [INFO] [stdout] 13: 0x56abd209b3bf - as core::ops::function::Fn>::call::h2883c9d2dbd4e81c [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/alloc/src/boxed.rs:2099:9 [INFO] [stdout] 14: 0x56abd209b3bf - std::panicking::panic_with_hook::hf5648b7cec6bc73e [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/std/src/panicking.rs:842:13 [INFO] [stdout] 15: 0x56abd209b21a - std::panicking::panic_handler::{{closure}}::h1b2ed3864ba94359 [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/std/src/panicking.rs:707:13 [INFO] [stdout] 16: 0x56abd2096349 - std::sys::backtrace::__rust_end_short_backtrace::hd0186b2b27f5aaa7 [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/std/src/sys/backtrace.rs:174:18 [INFO] [stdout] 17: 0x56abd207ec2d - __rustc[f7dae8b92efe1d7a]::rust_begin_unwind [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/std/src/panicking.rs:698:5 [INFO] [stdout] 18: 0x56abd20d7ff0 - core::panicking::panic_fmt::hb5d6b83773432920 [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/core/src/panicking.rs:80:14 [INFO] [stdout] 19: 0x56abd20d73b6 - core::result::unwrap_failed::h427ee4a8bb06d8af [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/core/src/result.rs:1862:5 [INFO] [stdout] 20: 0x56abd18ecafd - core::result::Result::unwrap::h951b6c33cb1fcbd1 [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/core/src/result.rs:1233:23 [INFO] [stdout] 21: 0x56abd18ecafd - gskits::gsbam::plp_counts_from_records::test::test_plp_within_region::hc70ab35dd15ec322 [INFO] [stdout] at /opt/rustwide/workdir/src/gsbam/plp_counts_from_records.rs:612:84 [INFO] [stdout] 22: 0x56abd18ecf87 - gskits::gsbam::plp_counts_from_records::test::test_plp_within_region::{{closure}}::h4159b654a3d81be5 [INFO] [stdout] at /opt/rustwide/workdir/src/gsbam/plp_counts_from_records.rs:611:32 [INFO] [stdout] 23: 0x56abd18ffb56 - core::ops::function::FnOnce::call_once::h2a21fee5f63080e6 [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/core/src/ops/function.rs:250:5 [INFO] [stdout] 24: 0x56abd1939d0b - core::ops::function::FnOnce::call_once::h3a2d82edd1a9b770 [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/core/src/ops/function.rs:250:5 [INFO] [stdout] 25: 0x56abd1939d0b - test::__rust_begin_short_backtrace::h85d4fe5033219107 [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/test/src/lib.rs:663:18 [INFO] [stdout] 26: 0x56abd194dcfd - test::run_test_in_process::{{closure}}::h67b48a81b9c9d7b6 [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/test/src/lib.rs:686:74 [INFO] [stdout] 27: 0x56abd194dcfd - as core::ops::function::FnOnce<()>>::call_once::h7680585480377cb5 [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/core/src/panic/unwind_safe.rs:274:9 [INFO] [stdout] 28: 0x56abd194dcfd - std::panicking::catch_unwind::do_call::hf71351b2657d4002 [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/std/src/panicking.rs:590:40 [INFO] [stdout] 29: 0x56abd194dcfd - std::panicking::catch_unwind::h7fcb5c0312d9e172 [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/std/src/panicking.rs:553:19 [INFO] [stdout] 30: 0x56abd194dcfd - std::panic::catch_unwind::h5cf3c9bdee894ebe [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/std/src/panic.rs:359:14 [INFO] [stdout] 31: 0x56abd194dcfd - test::run_test_in_process::h1469cb85193a3a25 [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/test/src/lib.rs:686:27 [INFO] [stdout] 32: 0x56abd194dcfd - test::run_test::{{closure}}::h59d45b3cd6453d69 [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/test/src/lib.rs:607:43 [INFO] [stdout] 33: 0x56abd1927244 - test::run_test::{{closure}}::h9baa0c3d443f28c9 [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/test/src/lib.rs:637:41 [INFO] [stdout] 34: 0x56abd1927244 - std::sys::backtrace::__rust_begin_short_backtrace::h97ea8cee4828663e [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/std/src/sys/backtrace.rs:158:18 [INFO] [stdout] 35: 0x56abd192aa9a - std::thread::Builder::spawn_unchecked_::{{closure}}::{{closure}}::h5d7539d5f78cee61 [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/std/src/thread/mod.rs:562:17 [INFO] [stdout] 36: 0x56abd192aa9a - as core::ops::function::FnOnce<()>>::call_once::he4c551e23c5e9b22 [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/core/src/panic/unwind_safe.rs:274:9 [INFO] [stdout] 37: 0x56abd192aa9a - std::panicking::catch_unwind::do_call::h522b41a6c157aaba [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/std/src/panicking.rs:590:40 [INFO] [stdout] 38: 0x56abd192aa9a - std::panicking::catch_unwind::h0efbf72006b8e365 [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/std/src/panicking.rs:553:19 [INFO] [stdout] 39: 0x56abd192aa9a - std::panic::catch_unwind::h3b081041e6c97066 [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/std/src/panic.rs:359:14 [INFO] [stdout] 40: 0x56abd192aa9a - std::thread::Builder::spawn_unchecked_::{{closure}}::ha751309815d5d8cf [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/std/src/thread/mod.rs:560:30 [INFO] [stdout] 41: 0x56abd192aa9a - core::ops::function::FnOnce::call_once{{vtable.shim}}::h2084b887a5fe25a7 [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/core/src/ops/function.rs:250:5 [INFO] [stdout] 42: 0x56abd209173f - as core::ops::function::FnOnce>::call_once::h3adbd6ccf5f737af [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/alloc/src/boxed.rs:2085:9 [INFO] [stdout] 43: 0x56abd209173f - std::sys::thread::unix::Thread::new::thread_start::hb3dc6483caa1b987 [INFO] [stdout] at /rustc/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/library/std/src/sys/thread/unix.rs:124:17 [INFO] [stdout] 44: 0x7dd61d737aa4 - [INFO] [stdout] 45: 0x7dd61d7c4a64 - clone [INFO] [stdout] 46: 0x0 - [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] failures: [INFO] [stdout] gsbam::bam_header_ext::test::test_header_ext [INFO] [stdout] gsbam::bam_header_ext::test::test_rg_rn_mapping [INFO] [stdout] gsbam::plp_counts_from_records::test::test_plp_within_region [INFO] [stdout] [INFO] [stdout] test result: FAILED. 25 passed; 3 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.22s [INFO] [stdout] [INFO] [stderr] error: test failed, to rerun pass `--lib` [INFO] running `Command { std: "docker" "inspect" "754f9ef12bb07a9c22dbecfe3e597bae2d2fee998070247ffa272dd0a76ae486", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "754f9ef12bb07a9c22dbecfe3e597bae2d2fee998070247ffa272dd0a76ae486", kill_on_drop: false }` [INFO] [stdout] 754f9ef12bb07a9c22dbecfe3e597bae2d2fee998070247ffa272dd0a76ae486