[INFO] fetching crate gffkit 0.1.2... [INFO] testing gffkit-0.1.2 against master#c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38 for pr-146098-7 [INFO] extracting crate gffkit 0.1.2 into /workspace/builds/worker-2-tc1/source [INFO] started tweaking crates.io crate gffkit 0.1.2 [INFO] finished tweaking crates.io crate gffkit 0.1.2 [INFO] tweaked toml for crates.io crate gffkit 0.1.2 written to /workspace/builds/worker-2-tc1/source/Cargo.toml [INFO] validating manifest of crates.io crate gffkit 0.1.2 on toolchain c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38 [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] crate crates.io crate gffkit 0.1.2 already has a lockfile, it will not be regenerated [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] Updating crates.io index [INFO] [stderr] Downloading crates ... [INFO] [stderr] Downloaded noodles-gtf v0.28.0 [INFO] [stderr] Downloaded is-terminal v0.4.12 [INFO] [stderr] Downloaded noodles-fasta v0.38.0 [INFO] [stderr] Downloaded bio-types v1.0.1 [INFO] [stderr] Downloaded anyhow v1.0.86 [INFO] [stderr] Downloaded matrixmultiply v0.3.8 [INFO] [stderr] Downloaded safe_arch v0.7.1 [INFO] [stderr] Downloaded wide v0.7.20 [INFO] [stderr] Downloaded statrs v0.16.0 [INFO] [stderr] Downloaded triple_accel v0.4.0 [INFO] [stderr] Downloaded proc-macro2 v1.0.83 [INFO] [stderr] Downloaded bio v1.6.0 [INFO] [stderr] Downloaded syn v2.0.65 [INFO] [stderr] Downloaded human-sort v0.2.2 [INFO] [stderr] Downloaded terminal_size v0.3.0 [INFO] [stderr] Downloaded noodles-gff v0.33.0 [INFO] [stderr] Downloaded noodles-bgzf v0.30.0 [INFO] [stderr] Downloaded noodles-csi v0.35.0 [INFO] [stderr] Downloaded editdistancek v1.0.2 [INFO] [stderr] Downloaded either v1.12.0 [INFO] [stderr] Downloaded multimap v0.9.1 [INFO] [stderr] Downloaded noodles v0.74.0 [INFO] [stderr] Downloaded crossbeam-channel v0.5.13 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:4848fb76d95f26979359cc7e45710b1dbc8f3acb7aeedee7c460d7702230f228" "/opt/rustwide/cargo-home/bin/cargo" "+c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] 0432418cb8b85259a2519cacb060045e108a496a9147ee70e949b2a7a667caa2 [INFO] running `Command { std: "docker" "start" "-a" "0432418cb8b85259a2519cacb060045e108a496a9147ee70e949b2a7a667caa2", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "0432418cb8b85259a2519cacb060045e108a496a9147ee70e949b2a7a667caa2", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "0432418cb8b85259a2519cacb060045e108a496a9147ee70e949b2a7a667caa2", kill_on_drop: false }` [INFO] [stdout] 0432418cb8b85259a2519cacb060045e108a496a9147ee70e949b2a7a667caa2 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:4848fb76d95f26979359cc7e45710b1dbc8f3acb7aeedee7c460d7702230f228" "/opt/rustwide/cargo-home/bin/cargo" "+c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38" "build" "--frozen" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] 515af0fea9ea4c8ec719f6efd2292bd19efddc4755002a1021017855c296dc14 [INFO] running `Command { std: "docker" "start" "-a" "515af0fea9ea4c8ec719f6efd2292bd19efddc4755002a1021017855c296dc14", kill_on_drop: false }` [INFO] [stderr] Compiling proc-macro2 v1.0.83 [INFO] [stderr] Compiling crossbeam-utils v0.8.20 [INFO] [stderr] Compiling num-traits v0.2.19 [INFO] [stderr] Compiling libm v0.2.8 [INFO] [stderr] Compiling cc v1.0.98 [INFO] [stderr] Compiling miniz_oxide v0.7.3 [INFO] [stderr] Compiling getrandom v0.2.15 [INFO] [stderr] Compiling bstr v1.9.1 [INFO] [stderr] Compiling matrixmultiply v0.3.8 [INFO] [stderr] Compiling bytemuck v1.16.0 [INFO] [stderr] Compiling rand_core v0.6.4 [INFO] [stderr] Compiling bit-vec v0.6.3 [INFO] [stderr] Compiling ppv-lite86 v0.2.17 [INFO] [stderr] Compiling quote v1.0.36 [INFO] [stderr] Compiling crossbeam-channel v0.5.13 [INFO] [stderr] Compiling flate2 v1.0.30 [INFO] [stderr] Compiling rand_chacha v0.3.1 [INFO] [stderr] Compiling noodles-core v0.15.0 [INFO] [stderr] Compiling safe_arch v0.7.1 [INFO] [stderr] Compiling syn v2.0.65 [INFO] [stderr] Compiling syn v1.0.109 [INFO] [stderr] Compiling noodles-bgzf v0.30.0 [INFO] [stderr] Compiling rustix v0.38.34 [INFO] [stderr] Compiling semver v0.1.20 [INFO] [stderr] Compiling rustversion v1.0.17 [INFO] [stderr] Compiling regex-automata v0.4.6 [INFO] [stderr] Compiling num-complex v0.4.6 [INFO] [stderr] Compiling num-integer v0.1.46 [INFO] [stderr] Compiling approx v0.5.1 [INFO] [stderr] Compiling rustc_version v0.1.7 [INFO] [stderr] Compiling wide v0.7.20 [INFO] [stderr] Compiling rand v0.8.5 [INFO] [stderr] Compiling linux-raw-sys v0.4.14 [INFO] [stderr] Compiling feature-probe v0.1.1 [INFO] [stderr] Compiling num-rational v0.4.2 [INFO] [stderr] Compiling bv v0.11.1 [INFO] [stderr] Compiling newtype_derive v0.1.6 [INFO] [stderr] Compiling rand_distr v0.4.3 [INFO] [stderr] Compiling noodles-csi v0.35.0 [INFO] [stderr] Compiling bzip2-sys v0.1.11+1.0.8 [INFO] [stderr] Compiling lzma-sys v0.1.20 [INFO] [stderr] Compiling heck v0.4.1 [INFO] [stderr] Compiling anyhow v1.0.86 [INFO] [stderr] Compiling terminal_size v0.3.0 [INFO] [stderr] Compiling csv-core v0.1.11 [INFO] [stderr] Compiling clap_lex v0.7.0 [INFO] [stderr] Compiling regex v1.10.4 [INFO] [stderr] Compiling either v1.12.0 [INFO] [stderr] Compiling simba v0.6.0 [INFO] [stderr] Compiling noodles-gff v0.33.0 [INFO] [stderr] Compiling itertools v0.11.0 [INFO] [stderr] Compiling clap_builder v4.5.2 [INFO] [stderr] Compiling petgraph v0.6.5 [INFO] [stderr] Compiling noodles-gtf v0.28.0 [INFO] [stderr] Compiling nalgebra-macros v0.1.0 [INFO] [stderr] Compiling derive-new v0.5.9 [INFO] [stderr] Compiling ndarray v0.15.6 [INFO] [stderr] Compiling ordered-float v3.9.2 [INFO] [stderr] Compiling itertools-num v0.1.3 [INFO] [stderr] Compiling noodles-fasta v0.38.0 [INFO] [stderr] Compiling bit-set v0.5.3 [INFO] [stderr] Compiling is-terminal v0.4.12 [INFO] [stderr] Compiling iana-time-zone v0.1.60 [INFO] [stderr] Compiling triple_accel v0.4.0 [INFO] [stderr] Compiling humantime v2.1.0 [INFO] [stderr] Compiling custom_derive v0.1.7 [INFO] [stderr] Compiling strum v0.25.0 [INFO] [stderr] Compiling editdistancek v1.0.2 [INFO] [stderr] Compiling chrono v0.4.38 [INFO] [stderr] Compiling env_logger v0.10.2 [INFO] [stderr] Compiling noodles v0.74.0 [INFO] [stderr] Compiling xz2 v0.1.7 [INFO] [stderr] Compiling serde_derive v1.0.202 [INFO] [stderr] Compiling thiserror-impl v1.0.61 [INFO] [stderr] Compiling enum-map-derive v0.17.0 [INFO] [stderr] Compiling strum_macros v0.25.3 [INFO] [stderr] Compiling thiserror v1.0.61 [INFO] [stderr] Compiling enum-map v2.7.3 [INFO] [stderr] Compiling clap_derive v4.5.4 [INFO] [stderr] Compiling bzip2 v0.4.4 [INFO] [stderr] Compiling atty v0.2.14 [INFO] [stderr] Compiling nalgebra v0.29.0 [INFO] [stderr] Compiling human-sort v0.2.2 [INFO] [stderr] Compiling bio-types v1.0.1 [INFO] [stderr] Compiling serde v1.0.202 [INFO] [stderr] Compiling clap v4.5.4 [INFO] [stderr] Compiling csv v1.3.0 [INFO] [stderr] Compiling multimap v0.9.1 [INFO] [stderr] Compiling vec_map v0.8.2 [INFO] [stderr] Compiling statrs v0.16.0 [INFO] [stderr] Compiling bio v1.6.0 [INFO] [stderr] Compiling gffkit v0.1.2 (/opt/rustwide/workdir) [INFO] [stderr] Finished `dev` profile [unoptimized + debuginfo] target(s) in 1m 26s [INFO] running `Command { std: "docker" "inspect" "515af0fea9ea4c8ec719f6efd2292bd19efddc4755002a1021017855c296dc14", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "515af0fea9ea4c8ec719f6efd2292bd19efddc4755002a1021017855c296dc14", kill_on_drop: false }` [INFO] [stdout] 515af0fea9ea4c8ec719f6efd2292bd19efddc4755002a1021017855c296dc14 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:4848fb76d95f26979359cc7e45710b1dbc8f3acb7aeedee7c460d7702230f228" "/opt/rustwide/cargo-home/bin/cargo" "+c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] 963f58c92b757cb32c0efadd3187198dca172ccee1494cc9e08bf395f7a2597a [INFO] running `Command { std: "docker" "start" "-a" "963f58c92b757cb32c0efadd3187198dca172ccee1494cc9e08bf395f7a2597a", kill_on_drop: false }` [INFO] [stderr] Compiling gffkit v0.1.2 (/opt/rustwide/workdir) [INFO] [stderr] Finished `test` profile [unoptimized + debuginfo] target(s) in 1.02s [INFO] running `Command { std: "docker" "inspect" "963f58c92b757cb32c0efadd3187198dca172ccee1494cc9e08bf395f7a2597a", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "963f58c92b757cb32c0efadd3187198dca172ccee1494cc9e08bf395f7a2597a", kill_on_drop: false }` [INFO] [stdout] 963f58c92b757cb32c0efadd3187198dca172ccee1494cc9e08bf395f7a2597a [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:4848fb76d95f26979359cc7e45710b1dbc8f3acb7aeedee7c460d7702230f228" "/opt/rustwide/cargo-home/bin/cargo" "+c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38" "test" "--frozen", kill_on_drop: false }` [INFO] [stdout] 5c61be976f0e3f0ade6014539aded4ccf6ab4df4b7e9cd25022a1c89a73bafaf [INFO] running `Command { std: "docker" "start" "-a" "5c61be976f0e3f0ade6014539aded4ccf6ab4df4b7e9cd25022a1c89a73bafaf", kill_on_drop: false }` [INFO] [stderr] Finished `test` profile [unoptimized + debuginfo] target(s) in 0.28s [INFO] [stderr] Running unittests src/main.rs (/opt/rustwide/target/debug/deps/gffkit-9d69e774d485c07a) [INFO] [stdout] [INFO] [stdout] running 0 tests [INFO] [stdout] [INFO] [stdout] test result: ok. 0 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.00s [INFO] [stdout] [INFO] running `Command { std: "docker" "inspect" "5c61be976f0e3f0ade6014539aded4ccf6ab4df4b7e9cd25022a1c89a73bafaf", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "5c61be976f0e3f0ade6014539aded4ccf6ab4df4b7e9cd25022a1c89a73bafaf", kill_on_drop: false }` [INFO] [stdout] 5c61be976f0e3f0ade6014539aded4ccf6ab4df4b7e9cd25022a1c89a73bafaf