[INFO] fetching crate genome-graph 11.0.0... [INFO] testing genome-graph-11.0.0 against master#c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38 for pr-146098-7 [INFO] extracting crate genome-graph 11.0.0 into /workspace/builds/worker-7-tc1/source [INFO] removed /workspace/builds/worker-7-tc1/source/rust-toolchain.toml [INFO] started tweaking crates.io crate genome-graph 11.0.0 [INFO] finished tweaking crates.io crate genome-graph 11.0.0 [INFO] tweaked toml for crates.io crate genome-graph 11.0.0 written to /workspace/builds/worker-7-tc1/source/Cargo.toml [INFO] validating manifest of crates.io crate genome-graph 11.0.0 on toolchain c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38 [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] crate crates.io crate genome-graph 11.0.0 already has a lockfile, it will not be regenerated [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] Updating crates.io index [INFO] [stderr] Downloading crates ... [INFO] [stderr] Downloaded rand_core v0.9.0 [INFO] [stderr] Downloaded traitgraph v8.1.2 [INFO] [stderr] Downloaded traitsequence v8.1.2 [INFO] [stderr] Downloaded traitgraph-algo v8.1.2 [INFO] [stderr] Downloaded compact-genome v12.0.1 [INFO] [stderr] Downloaded itertools-num v0.1.3 [INFO] [stderr] Downloaded derive-new v0.6.0 [INFO] [stderr] Downloaded bio-types v1.0.4 [INFO] [stderr] Downloaded bitvector v0.1.5 [INFO] [stderr] Downloaded triple_accel v0.4.0 [INFO] [stderr] Downloaded bigraph v5.0.1 [INFO] [stderr] Downloaded statrs v0.17.1 [INFO] [stderr] Downloaded editdistancek v1.0.2 [INFO] [stderr] Downloaded zerocopy-derive v0.8.14 [INFO] [stderr] Downloaded disjoint-sets v0.4.2 [INFO] [stderr] Downloaded zerocopy v0.8.14 [INFO] [stderr] Downloaded bio v2.0.3 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-7-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-7-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:4848fb76d95f26979359cc7e45710b1dbc8f3acb7aeedee7c460d7702230f228" "/opt/rustwide/cargo-home/bin/cargo" "+c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] 3d82100c8fe368270f13ff62fe2619b12013d4e48a0b0c497a1b58e6f79571db [INFO] running `Command { std: "docker" "start" "-a" "3d82100c8fe368270f13ff62fe2619b12013d4e48a0b0c497a1b58e6f79571db", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "3d82100c8fe368270f13ff62fe2619b12013d4e48a0b0c497a1b58e6f79571db", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "3d82100c8fe368270f13ff62fe2619b12013d4e48a0b0c497a1b58e6f79571db", kill_on_drop: false }` [INFO] [stdout] 3d82100c8fe368270f13ff62fe2619b12013d4e48a0b0c497a1b58e6f79571db [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-7-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-7-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:4848fb76d95f26979359cc7e45710b1dbc8f3acb7aeedee7c460d7702230f228" "/opt/rustwide/cargo-home/bin/cargo" "+c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38" "build" "--frozen" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] f35ec25df33ede5cddd90e312b2cde98b7673026c9cabfef801cbf5b4fde3d3f [INFO] running `Command { std: "docker" "start" "-a" "f35ec25df33ede5cddd90e312b2cde98b7673026c9cabfef801cbf5b4fde3d3f", kill_on_drop: false }` [INFO] [stderr] Compiling libm v0.2.11 [INFO] [stderr] Compiling foldhash v0.1.4 [INFO] [stderr] Compiling getrandom v0.3.1 [INFO] [stderr] Compiling zerocopy v0.8.14 [INFO] [stderr] Compiling bytemuck v1.21.0 [INFO] [stderr] Compiling num-traits v0.2.19 [INFO] [stderr] Compiling libc v0.2.169 [INFO] [stderr] Compiling matrixmultiply v0.3.9 [INFO] [stderr] Compiling semver v0.1.20 [INFO] [stderr] Compiling rawpointer v0.2.1 [INFO] [stderr] Compiling typenum v1.17.0 [INFO] [stderr] Compiling syn v2.0.96 [INFO] [stderr] Compiling bitvec v1.0.1 [INFO] [stderr] Compiling aho-corasick v1.1.3 [INFO] [stderr] Compiling traitsequence v8.1.2 [INFO] [stderr] Compiling fixedbitset v0.5.7 [INFO] [stderr] Compiling hashbrown v0.15.2 [INFO] [stderr] Compiling either v1.13.0 [INFO] [stderr] Compiling anyhow v1.0.95 [INFO] [stderr] Compiling csv-core v0.1.11 [INFO] [stderr] Compiling rustc_version v0.1.7 [INFO] [stderr] Compiling bit-vec v0.8.0 [INFO] [stderr] Compiling itertools v0.13.0 [INFO] [stderr] Compiling safe_arch v0.7.4 [INFO] [stderr] Compiling itertools v0.14.0 [INFO] [stderr] Compiling bit-set v0.8.0 [INFO] [stderr] Compiling newtype_derive v0.1.6 [INFO] [stderr] Compiling editdistancek v1.0.2 [INFO] [stderr] Compiling custom_derive v0.1.7 [INFO] [stderr] Compiling bytecount v0.6.8 [INFO] [stderr] Compiling triple_accel v0.4.0 [INFO] [stderr] Compiling bitvector v0.1.5 [INFO] [stderr] Compiling log v0.4.25 [INFO] [stderr] Compiling disjoint-sets v0.4.2 [INFO] [stderr] Compiling getrandom v0.2.15 [INFO] [stderr] Compiling wide v0.7.32 [INFO] [stderr] Compiling rand_core v0.6.4 [INFO] [stderr] Compiling indexmap v2.7.1 [INFO] [stderr] Compiling num-complex v0.4.6 [INFO] [stderr] Compiling num-integer v0.1.46 [INFO] [stderr] Compiling approx v0.5.1 [INFO] [stderr] Compiling ordered-float v4.6.0 [INFO] [stderr] Compiling itertools-num v0.1.3 [INFO] [stderr] Compiling num-rational v0.4.2 [INFO] [stderr] Compiling ndarray v0.16.1 [INFO] [stderr] Compiling regex-automata v0.4.9 [INFO] [stderr] Compiling petgraph v0.7.1 [INFO] [stderr] Compiling petgraph v0.6.5 [INFO] [stderr] Compiling rand_core v0.9.0 [INFO] [stderr] Compiling simba v0.8.1 [INFO] [stderr] Compiling regex v1.11.1 [INFO] [stderr] Compiling traitgraph v8.1.2 [INFO] [stderr] Compiling zerocopy-derive v0.7.35 [INFO] [stderr] Compiling serde_derive v1.0.217 [INFO] [stderr] Compiling thiserror-impl v1.0.69 [INFO] [stderr] Compiling nalgebra-macros v0.2.2 [INFO] [stderr] Compiling strum_macros v0.26.4 [INFO] [stderr] Compiling ref-cast-impl v1.0.23 [INFO] [stderr] Compiling enum-map-derive v0.17.0 [INFO] [stderr] Compiling derive-new v0.6.0 [INFO] [stderr] Compiling thiserror-impl v2.0.11 [INFO] [stderr] Compiling ref-cast v1.0.23 [INFO] [stderr] Compiling enum-map v2.7.3 [INFO] [stderr] Compiling zerocopy v0.7.35 [INFO] [stderr] Compiling thiserror v1.0.69 [INFO] [stderr] Compiling thiserror v2.0.11 [INFO] [stderr] Compiling compact-genome v12.0.1 [INFO] [stderr] Compiling ppv-lite86 v0.2.20 [INFO] [stderr] Compiling bio-types v1.0.4 [INFO] [stderr] Compiling rand_chacha v0.3.1 [INFO] [stderr] Compiling rand_chacha v0.9.0 [INFO] [stderr] Compiling rand v0.9.0 [INFO] [stderr] Compiling serde v1.0.217 [INFO] [stderr] Compiling rand v0.8.5 [INFO] [stderr] Compiling rand_distr v0.4.3 [INFO] [stderr] Compiling nalgebra v0.32.6 [INFO] [stderr] Compiling traitgraph-algo v8.1.2 [INFO] [stderr] Compiling bigraph v5.0.1 [INFO] [stderr] Compiling csv v1.3.1 [INFO] [stderr] Compiling bv v0.11.1 [INFO] [stderr] Compiling vec_map v0.8.2 [INFO] [stderr] Compiling multimap v0.10.0 [INFO] [stderr] Compiling statrs v0.17.1 [INFO] [stderr] Compiling bio v2.0.3 [INFO] [stderr] Compiling genome-graph v11.0.0 (/opt/rustwide/workdir) [INFO] [stderr] Finished `dev` profile [unoptimized + debuginfo] target(s) in 53.45s [INFO] running `Command { std: "docker" "inspect" "f35ec25df33ede5cddd90e312b2cde98b7673026c9cabfef801cbf5b4fde3d3f", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "f35ec25df33ede5cddd90e312b2cde98b7673026c9cabfef801cbf5b4fde3d3f", kill_on_drop: false }` [INFO] [stdout] f35ec25df33ede5cddd90e312b2cde98b7673026c9cabfef801cbf5b4fde3d3f [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-7-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-7-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:4848fb76d95f26979359cc7e45710b1dbc8f3acb7aeedee7c460d7702230f228" "/opt/rustwide/cargo-home/bin/cargo" "+c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] fe1ecfda879857efde648cba8d97b388b1e00912a238feb037872cb6d5e825c4 [INFO] running `Command { std: "docker" "start" "-a" "fe1ecfda879857efde648cba8d97b388b1e00912a238feb037872cb6d5e825c4", kill_on_drop: false }` [INFO] [stderr] Compiling genome-graph v11.0.0 (/opt/rustwide/workdir) [INFO] [stderr] Finished `test` profile [unoptimized + debuginfo] target(s) in 3.10s [INFO] running `Command { std: "docker" "inspect" "fe1ecfda879857efde648cba8d97b388b1e00912a238feb037872cb6d5e825c4", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "fe1ecfda879857efde648cba8d97b388b1e00912a238feb037872cb6d5e825c4", kill_on_drop: false }` [INFO] [stdout] fe1ecfda879857efde648cba8d97b388b1e00912a238feb037872cb6d5e825c4 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-7-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-7-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:4848fb76d95f26979359cc7e45710b1dbc8f3acb7aeedee7c460d7702230f228" "/opt/rustwide/cargo-home/bin/cargo" "+c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38" "test" "--frozen", kill_on_drop: false }` [INFO] [stdout] 1ce1045476b77e149c771f6fe95155227574d492a193fea04a775f5c8a068825 [INFO] running `Command { std: "docker" "start" "-a" "1ce1045476b77e149c771f6fe95155227574d492a193fea04a775f5c8a068825", kill_on_drop: false }` [INFO] [stderr] Finished `test` profile [unoptimized + debuginfo] target(s) in 0.15s [INFO] [stderr] Running unittests src/lib.rs (/opt/rustwide/target/debug/deps/genome_graph-5edd63a478c91c1d) [INFO] [stdout] [INFO] [stdout] running 11 tests [INFO] [stdout] test io::bcalm2::tests::test_edge_read_self_mirror_node_and_edge ... ok [INFO] [stdout] test io::bcalm2::tests::test_edge_read_write_forward_merge ... ok [INFO] [stdout] test io::bcalm2::tests::test_edge_read_write ... ok [INFO] [stdout] test io::bcalm2::tests::test_edge_read_write_minus_plus_loop ... ok [INFO] [stdout] test io::bcalm2::tests::test_edge_read_write_multigraph ... ok [INFO] [stdout] test io::bcalm2::tests::test_edge_read_self_mirror_edge ... ok [INFO] [stdout] test io::bcalm2::tests::test_edge_read_write_plus_minus_loop ... ok [INFO] [stdout] test io::bcalm2::tests::test_edge_read_write_plus_minus_and_minus_plus_loop ... ok [INFO] [stdout] test io::bcalm2::tests::test_node_read_write ... ok [INFO] [stdout] test io::gfa::tests::test_read_gfa_as_edge_centric_bigraph_simple ... ok [INFO] [stdout] test io::bcalm2::tests::test_edge_read_write_self_loops ... ok [INFO] [stderr] Doc-tests genome_graph [INFO] [stdout] [INFO] [stdout] test result: ok. 11 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.01s [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] running 0 tests [INFO] [stdout] [INFO] [stdout] test result: ok. 0 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.00s [INFO] [stdout] [INFO] running `Command { std: "docker" "inspect" "1ce1045476b77e149c771f6fe95155227574d492a193fea04a775f5c8a068825", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "1ce1045476b77e149c771f6fe95155227574d492a193fea04a775f5c8a068825", kill_on_drop: false }` [INFO] [stdout] 1ce1045476b77e149c771f6fe95155227574d492a193fea04a775f5c8a068825