[INFO] fetching crate checkm 0.3.0...
[INFO] testing checkm-0.3.0 against master#c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38 for pr-146098-7
[INFO] extracting crate checkm 0.3.0 into /workspace/builds/worker-4-tc1/source
[INFO] started tweaking crates.io crate checkm 0.3.0
[INFO] finished tweaking crates.io crate checkm 0.3.0
[INFO] tweaked toml for crates.io crate checkm 0.3.0 written to /workspace/builds/worker-4-tc1/source/Cargo.toml
[INFO] validating manifest of crates.io crate checkm 0.3.0 on toolchain c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38" "generate-lockfile" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] [stderr]     Updating crates.io index
[INFO] [stderr]      Locking 26 packages to latest compatible versions
[INFO] [stderr]       Adding env_logger v0.10.2 (available: v0.11.8)
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] [stderr]  Downloading crates ...
[INFO] [stderr]   Downloaded cargo-husky v1.5.0
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-4-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-4-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:4848fb76d95f26979359cc7e45710b1dbc8f3acb7aeedee7c460d7702230f228" "/opt/rustwide/cargo-home/bin/cargo" "+c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] [stdout] 8a1d8245effdb62989b11257d79fe6fc61a263720b618dcec4f57b2f2b62a0e7
[INFO] running `Command { std: "docker" "start" "-a" "8a1d8245effdb62989b11257d79fe6fc61a263720b618dcec4f57b2f2b62a0e7", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "8a1d8245effdb62989b11257d79fe6fc61a263720b618dcec4f57b2f2b62a0e7", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "8a1d8245effdb62989b11257d79fe6fc61a263720b618dcec4f57b2f2b62a0e7", kill_on_drop: false }`
[INFO] [stdout] 8a1d8245effdb62989b11257d79fe6fc61a263720b618dcec4f57b2f2b62a0e7
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-4-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-4-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:4848fb76d95f26979359cc7e45710b1dbc8f3acb7aeedee7c460d7702230f228" "/opt/rustwide/cargo-home/bin/cargo" "+c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38" "build" "--frozen" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] 00e68a894eb5556610b1d2c1068bd87a16ecb5fa95235b9406d927f9dbf03144
[INFO] running `Command { std: "docker" "start" "-a" "00e68a894eb5556610b1d2c1068bd87a16ecb5fa95235b9406d927f9dbf03144", kill_on_drop: false }`
[INFO] [stderr]    Compiling csv-core v0.1.13
[INFO] [stderr]    Compiling env_logger v0.10.2
[INFO] [stderr]    Compiling csv v1.4.0
[INFO] [stderr]    Compiling checkm v0.3.0 (/opt/rustwide/workdir)
[INFO] [stderr]     Finished `dev` profile [unoptimized + debuginfo] target(s) in 1.63s
[INFO] running `Command { std: "docker" "inspect" "00e68a894eb5556610b1d2c1068bd87a16ecb5fa95235b9406d927f9dbf03144", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "00e68a894eb5556610b1d2c1068bd87a16ecb5fa95235b9406d927f9dbf03144", kill_on_drop: false }`
[INFO] [stdout] 00e68a894eb5556610b1d2c1068bd87a16ecb5fa95235b9406d927f9dbf03144
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-4-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-4-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:4848fb76d95f26979359cc7e45710b1dbc8f3acb7aeedee7c460d7702230f228" "/opt/rustwide/cargo-home/bin/cargo" "+c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] a9d80a4b27ce79f700f0902270bd438c6d57da16821ce843d0fec354b0cce4f3
[INFO] running `Command { std: "docker" "start" "-a" "a9d80a4b27ce79f700f0902270bd438c6d57da16821ce843d0fec354b0cce4f3", kill_on_drop: false }`
[INFO] [stderr]    Compiling cargo-husky v1.5.0
[INFO] [stderr]    Compiling checkm v0.3.0 (/opt/rustwide/workdir)
[INFO] [stderr]     Finished `test` profile [unoptimized + debuginfo] target(s) in 2.50s
[INFO] running `Command { std: "docker" "inspect" "a9d80a4b27ce79f700f0902270bd438c6d57da16821ce843d0fec354b0cce4f3", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "a9d80a4b27ce79f700f0902270bd438c6d57da16821ce843d0fec354b0cce4f3", kill_on_drop: false }`
[INFO] [stdout] a9d80a4b27ce79f700f0902270bd438c6d57da16821ce843d0fec354b0cce4f3
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-4-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-4-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:4848fb76d95f26979359cc7e45710b1dbc8f3acb7aeedee7c460d7702230f228" "/opt/rustwide/cargo-home/bin/cargo" "+c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38" "test" "--frozen", kill_on_drop: false }`
[INFO] [stdout] 5d2ac70b4533e87cd0bc6672efe266be7ef65f46d572fc9eca184d7eed33da80
[INFO] running `Command { std: "docker" "start" "-a" "5d2ac70b4533e87cd0bc6672efe266be7ef65f46d572fc9eca184d7eed33da80", kill_on_drop: false }`
[INFO] [stderr]     Finished `test` profile [unoptimized + debuginfo] target(s) in 0.08s
[INFO] [stderr]      Running unittests src/lib.rs (/opt/rustwide/target/debug/deps/checkm-6c68693a95904faf)
[INFO] [stdout] 
[INFO] [stdout] running 13 tests
[INFO] [stdout] test test::test_checkm2_14column_format ... ok
[INFO] [stdout] test test::test_fasta_ordering_4times_min_completeness ... ok
[INFO] [stdout] test test::test_checkm2_good_quality_genome_names ... ok
[INFO] [stdout] test test::test_good_quality_genome_names ... ok
[INFO] [stdout] test test::test_ordering_4times ... ok
[INFO] [stdout] test test::test_retrieve_checkm2_gzip ... ok
[INFO] [stdout] test test::test_ordering_5times ... ok
[INFO] [stdout] test test::test_retrieve_checkm2 ... ok
[INFO] [stdout] test test::test_retrieve_gzip ... ok
[INFO] [stdout] test test::test_retrieve ... ok
[INFO] [stdout] test test::test_absolute_path_retrieval ... ok
[INFO] [stdout] test test::test_fasta_ordering_4times ... ok
[INFO] [stdout] test test::test_checkm2_13column_format ... ok
[INFO] [stderr]    Doc-tests checkm
[INFO] [stdout] 
[INFO] [stdout] test result: ok. 13 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.02s
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] running 0 tests
[INFO] [stdout] 
[INFO] [stdout] test result: ok. 0 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.00s
[INFO] [stdout] 
[INFO] running `Command { std: "docker" "inspect" "5d2ac70b4533e87cd0bc6672efe266be7ef65f46d572fc9eca184d7eed33da80", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "5d2ac70b4533e87cd0bc6672efe266be7ef65f46d572fc9eca184d7eed33da80", kill_on_drop: false }`
[INFO] [stdout] 5d2ac70b4533e87cd0bc6672efe266be7ef65f46d572fc9eca184d7eed33da80