[INFO] fetching crate bam-builder 1.0.0...
[INFO] testing bam-builder-1.0.0 against master#c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38 for pr-146098-7
[INFO] extracting crate bam-builder 1.0.0 into /workspace/builds/worker-4-tc1/source
[INFO] started tweaking crates.io crate bam-builder 1.0.0
[INFO] finished tweaking crates.io crate bam-builder 1.0.0
[INFO] tweaked toml for crates.io crate bam-builder 1.0.0 written to /workspace/builds/worker-4-tc1/source/Cargo.toml
[INFO] validating manifest of crates.io crate bam-builder 1.0.0 on toolchain c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] crate crates.io crate bam-builder 1.0.0 already has a lockfile, it will not be regenerated
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] [stderr]     Updating crates.io index
[INFO] [stderr]  Downloading crates ...
[INFO] [stderr]   Downloaded errno v0.3.3
[INFO] [stderr]   Downloaded percent-encoding v2.3.0
[INFO] [stderr]   Downloaded jobserver v0.1.26
[INFO] [stderr]   Downloaded newtype_derive v0.1.6
[INFO] [stderr]   Downloaded heck v0.4.1
[INFO] [stderr]   Downloaded derive_builder_macro v0.12.0
[INFO] [stderr]   Downloaded strum_macros v0.25.2
[INFO] [stderr]   Downloaded derive_builder_core v0.12.0
[INFO] [stderr]   Downloaded derive_builder v0.12.0
[INFO] [stderr]   Downloaded openssl-sys v0.9.93
[INFO] [stderr]   Downloaded proc-macro2 v1.0.67
[INFO] [stderr]   Downloaded rust-htslib v0.44.1
[INFO] [stderr]   Downloaded memchr v2.6.3
[INFO] [stderr]   Downloaded thiserror v1.0.49
[INFO] [stderr]   Downloaded rustversion v1.0.14
[INFO] [stderr]   Downloaded bio-types v1.0.1
[INFO] [stderr]   Downloaded aho-corasick v1.1.1
[INFO] [stderr]   Downloaded custom_derive v0.1.7
[INFO] [stderr]   Downloaded semver v0.1.20
[INFO] [stderr]   Downloaded idna v0.4.0
[INFO] [stderr]   Downloaded syn v2.0.37
[INFO] [stderr]   Downloaded regex v1.9.5
[INFO] [stderr]   Downloaded rustix v0.38.14
[INFO] [stderr]   Downloaded thiserror-impl v1.0.49
[INFO] [stderr]   Downloaded url v2.4.1
[INFO] [stderr]   Downloaded cmake v0.1.50
[INFO] [stderr]   Downloaded ieee754 v0.2.6
[INFO] [stderr]   Downloaded rustc_version v0.1.7
[INFO] [stderr]   Downloaded fs-utils v1.1.4
[INFO] [stderr]   Downloaded form_urlencoded v1.2.0
[INFO] [stderr]   Downloaded linear-map v1.2.0
[INFO] [stderr]   Downloaded regex-automata v0.3.8
[INFO] [stderr]   Downloaded bzip2-sys v0.1.11+1.0.8
[INFO] [stderr]   Downloaded libc v0.2.148
[INFO] [stderr]   Downloaded linux-raw-sys v0.4.7
[INFO] [stderr]   Downloaded libz-sys v1.1.12
[INFO] [stderr]   Downloaded curl-sys v0.4.66+curl-8.3.0
[INFO] [stderr]   Downloaded hts-sys v2.1.1
[INFO] [stderr]   Downloaded openssl-src v300.1.5+3.1.3
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-4-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-4-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:4848fb76d95f26979359cc7e45710b1dbc8f3acb7aeedee7c460d7702230f228" "/opt/rustwide/cargo-home/bin/cargo" "+c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] [stdout] 70ac07aa4f85894171b6dd1161d751bf1291836f9c8e7bfcb09bcd6040a297d5
[INFO] running `Command { std: "docker" "start" "-a" "70ac07aa4f85894171b6dd1161d751bf1291836f9c8e7bfcb09bcd6040a297d5", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "70ac07aa4f85894171b6dd1161d751bf1291836f9c8e7bfcb09bcd6040a297d5", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "70ac07aa4f85894171b6dd1161d751bf1291836f9c8e7bfcb09bcd6040a297d5", kill_on_drop: false }`
[INFO] [stdout] 70ac07aa4f85894171b6dd1161d751bf1291836f9c8e7bfcb09bcd6040a297d5
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-4-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-4-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:4848fb76d95f26979359cc7e45710b1dbc8f3acb7aeedee7c460d7702230f228" "/opt/rustwide/cargo-home/bin/cargo" "+c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38" "build" "--frozen" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] 0ce76f6a2f9f157883fc79663cec08726e974ff3d39f9d882dd5e9abaec3d853
[INFO] running `Command { std: "docker" "start" "-a" "0ce76f6a2f9f157883fc79663cec08726e974ff3d39f9d882dd5e9abaec3d853", kill_on_drop: false }`
[INFO] [stderr]    Compiling libc v0.2.148
[INFO] [stderr]    Compiling pkg-config v0.3.27
[INFO] [stderr]    Compiling proc-macro2 v1.0.67
[INFO] [stderr]    Compiling syn v1.0.109
[INFO] [stderr]    Compiling vcpkg v0.2.15
[INFO] [stderr]    Compiling strsim v0.10.0
[INFO] [stderr]    Compiling fnv v1.0.7
[INFO] [stderr]    Compiling memchr v2.6.3
[INFO] [stderr]    Compiling tinyvec_macros v0.1.1
[INFO] [stderr]    Compiling quick-error v1.2.3
[INFO] [stderr]    Compiling semver v0.1.20
[INFO] [stderr]    Compiling rustversion v1.0.14
[INFO] [stderr]    Compiling regex-syntax v0.7.5
[INFO] [stderr]    Compiling thiserror v1.0.49
[INFO] [stderr]    Compiling glob v0.3.1
[INFO] [stderr]    Compiling percent-encoding v2.3.0
[INFO] [stderr]    Compiling tinyvec v1.6.0
[INFO] [stderr]    Compiling fs-utils v1.1.4
[INFO] [stderr]    Compiling unicode-bidi v0.3.13
[INFO] [stderr]    Compiling rustix v0.38.14
[INFO] [stderr]    Compiling rustc_version v0.1.7
[INFO] [stderr]    Compiling heck v0.4.1
[INFO] [stderr]    Compiling form_urlencoded v1.2.0
[INFO] [stderr]    Compiling ppv-lite86 v0.2.17
[INFO] [stderr]    Compiling newtype_derive v0.1.6
[INFO] [stderr]    Compiling linux-raw-sys v0.4.7
[INFO] [stderr]    Compiling bitflags v2.4.0
[INFO] [stderr]    Compiling ieee754 v0.2.6
[INFO] [stderr]    Compiling linear-map v1.2.0
[INFO] [stderr]    Compiling fastrand v2.0.1
[INFO] [stderr]    Compiling custom_derive v0.1.7
[INFO] [stderr]    Compiling byteorder v1.4.3
[INFO] [stderr]    Compiling quote v1.0.33
[INFO] [stderr]    Compiling aho-corasick v1.1.1
[INFO] [stderr]    Compiling syn v2.0.37
[INFO] [stderr]    Compiling unicode-normalization v0.1.22
[INFO] [stderr]    Compiling idna v0.4.0
[INFO] [stderr]    Compiling regex-automata v0.3.8
[INFO] [stderr]    Compiling jobserver v0.1.26
[INFO] [stderr]    Compiling getrandom v0.2.10
[INFO] [stderr]    Compiling cc v1.0.83
[INFO] [stderr]    Compiling rand_core v0.6.4
[INFO] [stderr]    Compiling url v2.4.1
[INFO] [stderr]    Compiling rand_chacha v0.3.1
[INFO] [stderr]    Compiling rand v0.8.5
[INFO] [stderr]    Compiling openssl-src v300.1.5+3.1.3
[INFO] [stderr]    Compiling cmake v0.1.50
[INFO] [stderr]    Compiling tempfile v3.8.0
[INFO] [stderr]    Compiling openssl-sys v0.9.93
[INFO] [stderr]    Compiling curl-sys v0.4.66+curl-8.3.0
[INFO] [stderr]    Compiling bzip2-sys v0.1.11+1.0.8
[INFO] [stderr]    Compiling lzma-sys v0.1.20
[INFO] [stderr]    Compiling hts-sys v2.1.1
[INFO] [stderr]    Compiling libz-sys v1.1.12
[INFO] [stderr]    Compiling thiserror-impl v1.0.49
[INFO] [stderr]    Compiling strum_macros v0.25.2
[INFO] [stderr]    Compiling regex v1.9.5
[INFO] [stderr]    Compiling darling_core v0.14.4
[INFO] [stderr]    Compiling derive-new v0.5.9
[INFO] [stderr]    Compiling bio-types v1.0.1
[INFO] [stderr]    Compiling darling_macro v0.14.4
[INFO] [stderr]    Compiling darling v0.14.4
[INFO] [stderr]    Compiling derive_builder_core v0.12.0
[INFO] [stderr]    Compiling derive_builder_macro v0.12.0
[INFO] [stderr]    Compiling derive_builder v0.12.0
[INFO] [stderr]    Compiling rust-htslib v0.44.1
[INFO] [stderr]    Compiling bam-builder v1.0.0 (/opt/rustwide/workdir)
[INFO] [stderr]     Finished `dev` profile [unoptimized + debuginfo] target(s) in 2m 24s
[INFO] running `Command { std: "docker" "inspect" "0ce76f6a2f9f157883fc79663cec08726e974ff3d39f9d882dd5e9abaec3d853", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "0ce76f6a2f9f157883fc79663cec08726e974ff3d39f9d882dd5e9abaec3d853", kill_on_drop: false }`
[INFO] [stdout] 0ce76f6a2f9f157883fc79663cec08726e974ff3d39f9d882dd5e9abaec3d853
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-4-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-4-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:4848fb76d95f26979359cc7e45710b1dbc8f3acb7aeedee7c460d7702230f228" "/opt/rustwide/cargo-home/bin/cargo" "+c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] b430fb0e89b66570e64eb5fc7bb9a2fd7f38e58873d40d5a3feaebc57900cbae
[INFO] running `Command { std: "docker" "start" "-a" "b430fb0e89b66570e64eb5fc7bb9a2fd7f38e58873d40d5a3feaebc57900cbae", kill_on_drop: false }`
[INFO] [stderr]    Compiling bam-builder v1.0.0 (/opt/rustwide/workdir)
[INFO] [stderr]     Finished `test` profile [unoptimized + debuginfo] target(s) in 1.79s
[INFO] running `Command { std: "docker" "inspect" "b430fb0e89b66570e64eb5fc7bb9a2fd7f38e58873d40d5a3feaebc57900cbae", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "b430fb0e89b66570e64eb5fc7bb9a2fd7f38e58873d40d5a3feaebc57900cbae", kill_on_drop: false }`
[INFO] [stdout] b430fb0e89b66570e64eb5fc7bb9a2fd7f38e58873d40d5a3feaebc57900cbae
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-4-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-4-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:4848fb76d95f26979359cc7e45710b1dbc8f3acb7aeedee7c460d7702230f228" "/opt/rustwide/cargo-home/bin/cargo" "+c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38" "test" "--frozen", kill_on_drop: false }`
[INFO] [stdout] e1d63f5cf37e5a49d6a0aabfb860babef6fe7d54a106dfc0e366b3c1dc6e6ade
[INFO] running `Command { std: "docker" "start" "-a" "e1d63f5cf37e5a49d6a0aabfb860babef6fe7d54a106dfc0e366b3c1dc6e6ade", kill_on_drop: false }`
[INFO] [stderr]     Finished `test` profile [unoptimized + debuginfo] target(s) in 0.14s
[INFO] [stderr]      Running unittests src/lib.rs (/opt/rustwide/target/debug/deps/bam_builder-88010b09db0a2640)
[INFO] [stdout] 
[INFO] [stdout] running 2 tests
[INFO] [stdout] test tests::check_improper_pair ... ok
[INFO] [stderr]    Doc-tests bam_builder
[INFO] [stdout] test tests::check_proper_pairs ... ok
[INFO] [stdout] 
[INFO] [stdout] test result: ok. 2 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.01s
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] running 3 tests
[INFO] [stdout] test src/sequence_dict.rs - sequence_dict::SequenceDict (line 11) ... ok
[INFO] [stdout] test src/lib.rs - BamBuilder::new (line 111) ... ok
[INFO] [stdout] test src/lib.rs - (line 13) ... ok
[INFO] [stdout] 
[INFO] [stdout] test result: ok. 3 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 1.47s
[INFO] [stdout] 
[INFO] running `Command { std: "docker" "inspect" "e1d63f5cf37e5a49d6a0aabfb860babef6fe7d54a106dfc0e366b3c1dc6e6ade", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "e1d63f5cf37e5a49d6a0aabfb860babef6fe7d54a106dfc0e366b3c1dc6e6ade", kill_on_drop: false }`
[INFO] [stdout] e1d63f5cf37e5a49d6a0aabfb860babef6fe7d54a106dfc0e366b3c1dc6e6ade