[INFO] fetching crate convert_genome 0.1.0...
[INFO] testing convert_genome-0.1.0 against master#c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38 for pr-146098-7
[INFO] extracting crate convert_genome 0.1.0 into /workspace/builds/worker-5-tc1/source
[INFO] removed /workspace/builds/worker-5-tc1/source/rust-toolchain.toml
[INFO] started tweaking crates.io crate convert_genome 0.1.0
[INFO] removed 0 missing tests
[INFO] finished tweaking crates.io crate convert_genome 0.1.0
[INFO] tweaked toml for crates.io crate convert_genome 0.1.0 written to /workspace/builds/worker-5-tc1/source/Cargo.toml
[INFO] validating manifest of crates.io crate convert_genome 0.1.0 on toolchain c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] crate crates.io crate convert_genome 0.1.0 already has a lockfile, it will not be regenerated
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] [stderr]     Updating crates.io index
[INFO] [stderr]  Downloading crates ...
[INFO] [stderr]   Downloaded lru v0.16.2
[INFO] [stderr]   Downloaded noodles v0.101.0
[INFO] [stderr]   Downloaded noodles-core v0.18.0
[INFO] [stderr]   Downloaded grep v0.4.1
[INFO] [stderr]   Downloaded noodles-tabix v0.57.0
[INFO] [stderr]   Downloaded noodles-fasta v0.56.0
[INFO] [stderr]   Downloaded grep-cli v0.1.12
[INFO] [stderr]   Downloaded grep-searcher v0.1.16
[INFO] [stderr]   Downloaded noodles-bcf v0.78.0
[INFO] [stderr]   Downloaded curl v0.4.49
[INFO] [stderr]   Downloaded noodles-vcf v0.81.0
[INFO] [stderr]   Downloaded grep-printer v0.3.1
[INFO] [stderr]   Downloaded grep-regex v0.1.14
[INFO] [stderr]   Downloaded grep-matcher v0.1.8
[INFO] [stderr]   Downloaded noodles-bgzf v0.43.0
[INFO] [stderr]   Downloaded noodles-csi v0.51.0
[INFO] [stderr]   Downloaded curl-sys v0.4.83+curl-8.15.0
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-5-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-5-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:4848fb76d95f26979359cc7e45710b1dbc8f3acb7aeedee7c460d7702230f228" "/opt/rustwide/cargo-home/bin/cargo" "+c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] [stdout] f7feedcfd392fd2d5fbadfbf31c85b584dbb7c89d10f24b50f9f1571269e86ee
[INFO] running `Command { std: "docker" "start" "-a" "f7feedcfd392fd2d5fbadfbf31c85b584dbb7c89d10f24b50f9f1571269e86ee", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "f7feedcfd392fd2d5fbadfbf31c85b584dbb7c89d10f24b50f9f1571269e86ee", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "f7feedcfd392fd2d5fbadfbf31c85b584dbb7c89d10f24b50f9f1571269e86ee", kill_on_drop: false }`
[INFO] [stdout] f7feedcfd392fd2d5fbadfbf31c85b584dbb7c89d10f24b50f9f1571269e86ee
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-5-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-5-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:4848fb76d95f26979359cc7e45710b1dbc8f3acb7aeedee7c460d7702230f228" "/opt/rustwide/cargo-home/bin/cargo" "+c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38" "build" "--frozen" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] 20cc21f949ef6a4d93c55294c4676ba2263900891cdb56cd645ff0f635b81a56
[INFO] running `Command { std: "docker" "start" "-a" "20cc21f949ef6a4d93c55294c4676ba2263900891cdb56cd645ff0f635b81a56", kill_on_drop: false }`
[INFO] [stderr]    Compiling stable_deref_trait v1.2.1
[INFO] [stderr]    Compiling simd-adler32 v0.3.7
[INFO] [stderr]    Compiling zlib-rs v0.5.2
[INFO] [stderr]    Compiling cc v1.2.43
[INFO] [stderr]    Compiling aho-corasick v1.1.3
[INFO] [stderr]    Compiling foldhash v0.2.0
[INFO] [stderr]    Compiling bstr v1.12.1
[INFO] [stderr]    Compiling syn v2.0.108
[INFO] [stderr]    Compiling encoding_rs v0.8.35
[INFO] [stderr]    Compiling grep-matcher v0.1.8
[INFO] [stderr]    Compiling serde v1.0.228
[INFO] [stderr]    Compiling memmap2 v0.9.9
[INFO] [stderr]    Compiling bit-vec v0.8.0
[INFO] [stderr]    Compiling termcolor v1.4.1
[INFO] [stderr]    Compiling ryu v1.0.20
[INFO] [stderr]    Compiling regex-automata v0.4.13
[INFO] [stderr]    Compiling miniz_oxide v0.8.9
[INFO] [stderr]    Compiling hashbrown v0.16.0
[INFO] [stderr]    Compiling serde_json v1.0.145
[INFO] [stderr]    Compiling curl v0.4.49
[INFO] [stderr]    Compiling time-macros v0.2.24
[INFO] [stderr]    Compiling lock_api v0.4.14
[INFO] [stderr]    Compiling zopfli v0.8.2
[INFO] [stderr]    Compiling indexmap v2.12.0
[INFO] [stderr]    Compiling parking_lot_core v0.9.12
[INFO] [stderr]    Compiling form_urlencoded v1.2.2
[INFO] [stderr]    Compiling socket2 v0.6.1
[INFO] [stderr]    Compiling tempfile v3.23.0
[INFO] [stderr]    Compiling parking_lot v0.12.5
[INFO] [stderr]    Compiling lru v0.16.2
[INFO] [stderr]    Compiling noodles-core v0.18.0
[INFO] [stderr]    Compiling openssl-sys v0.9.110
[INFO] [stderr]    Compiling libz-sys v1.1.22
[INFO] [stderr]    Compiling curl-sys v0.4.83+curl-8.15.0
[INFO] [stderr]    Compiling time v0.3.44
[INFO] [stderr]    Compiling encoding_rs_io v0.1.7
[INFO] [stderr]    Compiling matchers v0.2.0
[INFO] [stderr]    Compiling libz-rs-sys v0.5.2
[INFO] [stderr]    Compiling flate2 v1.1.5
[INFO] [stderr]    Compiling noodles-bgzf v0.43.0
[INFO] [stderr]    Compiling zip v6.0.0
[INFO] [stderr]    Compiling noodles-csi v0.51.0
[INFO] [stderr]    Compiling noodles-fasta v0.56.0
[INFO] [stderr]    Compiling synstructure v0.13.2
[INFO] [stderr]    Compiling noodles-tabix v0.57.0
[INFO] [stderr]    Compiling globset v0.4.18
[INFO] [stderr]    Compiling grep-searcher v0.1.16
[INFO] [stderr]    Compiling grep-regex v0.1.14
[INFO] [stderr]    Compiling noodles-vcf v0.81.0
[INFO] [stderr]    Compiling zerovec-derive v0.11.1
[INFO] [stderr]    Compiling displaydoc v0.2.5
[INFO] [stderr]    Compiling tracing-attributes v0.1.30
[INFO] [stderr]    Compiling serde_derive v1.0.228
[INFO] [stderr]    Compiling clap_derive v4.5.49
[INFO] [stderr]    Compiling thiserror-impl v2.0.17
[INFO] [stderr]    Compiling zerofrom-derive v0.1.6
[INFO] [stderr]    Compiling yoke-derive v0.8.0
[INFO] [stderr]    Compiling grep-printer v0.3.1
[INFO] [stderr]    Compiling grep-cli v0.1.12
[INFO] [stderr]    Compiling thiserror v2.0.17
[INFO] [stderr]    Compiling zerofrom v0.1.6
[INFO] [stderr]    Compiling grep v0.4.1
[INFO] [stderr]    Compiling yoke v0.8.0
[INFO] [stderr]    Compiling convert_genome v0.1.0 (/opt/rustwide/workdir)
[INFO] [stderr]    Compiling tracing v0.1.41
[INFO] [stderr]    Compiling zerotrie v0.2.2
[INFO] [stderr]    Compiling tracing-subscriber v0.3.20
[INFO] [stderr]    Compiling zerovec v0.11.4
[INFO] [stderr]    Compiling clap v4.5.50
[INFO] [stderr]    Compiling noodles-bcf v0.78.0
[INFO] [stderr] warning: convert_genome@0.1.0:  build stage: initialization
[INFO] [stderr] warning: convert_genome@0.1.0:  build stage: manual lint self-check
[INFO] [stderr] warning: convert_genome@0.1.0:  build stage: manual lint self-check: running rustc
[INFO] [stderr] warning: convert_genome@0.1.0:  build detail: manual lint self-check: selected rustc executable: "/opt/rustwide/rustup-home/toolchains/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/bin/rustc"
[INFO] [stderr] warning: convert_genome@0.1.0:  build detail: manual lint self-check: HOST environment: "x86_64-unknown-linux-gnu"
[INFO] [stderr] warning: convert_genome@0.1.0:  build detail: manual lint self-check: TARGET environment: "x86_64-unknown-linux-gnu"
[INFO] [stderr] warning: convert_genome@0.1.0:  build detail: manual lint self-check: cfg target arch: "x86_64"
[INFO] [stderr] warning: convert_genome@0.1.0:  build detail: manual lint self-check: build context arch/os: x86_64 / linux
[INFO] [stderr] warning: convert_genome@0.1.0:  build stage: manual lint self-check: preparing rustc command
[INFO] [stderr] warning: convert_genome@0.1.0:  build detail: manual lint self-check: command preview: "/opt/rustwide/rustup-home/toolchains/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/bin/rustc" "--edition" "2021" "-D" "unused_variables" "-D" "dead_code" "-D" "unused_imports" "--crate-type" "bin" "--error-format" "human" "-o" "/opt/rustwide/target/debug/build/convert_genome-684b0586727c7e0d/out/build_lint_check" "-L" "dependency=/opt/rustwide/target/debug/deps" "--extern" "grep=/opt/rustwide/target/debug/deps/libgrep-ceca1707ed7367e2.rlib" "--extern" "walkdir=/opt/rustwide/target/debug/deps/libwalkdir-1a00c768f8c7f3de.rlib" "/opt/rustwide/workdir/build.rs"
[INFO] [stderr] warning: convert_genome@0.1.0:  build detail: manual lint self-check: current dir before spawn: "/opt/rustwide/workdir"
[INFO] [stderr] warning: convert_genome@0.1.0:  build stage: manual lint self-check: invoking rustc
[INFO] [stderr] warning: convert_genome@0.1.0:  build detail: manual lint self-check: calling Command::output() for rustc self-lint
[INFO] [stderr] warning: convert_genome@0.1.0:  build stage: manual lint self-check: rustc invocation returned
[INFO] [stderr] warning: convert_genome@0.1.0:  build detail: manual lint self-check: rustc exit status: Some(0)
[INFO] [stderr] warning: convert_genome@0.1.0:  build detail: manual lint self-check: rustc stdout bytes: 0 / stderr bytes: 0
[INFO] [stderr] warning: convert_genome@0.1.0:  build detail: Completed rustc self-lint for build.rs
[INFO] [stderr] warning: convert_genome@0.1.0:  build stage: scan underscore-prefixed bindings
[INFO] [stderr] warning: convert_genome@0.1.0:  build detail: underscore scan identified 0 violation groups
[INFO] [stderr] warning: convert_genome@0.1.0:  build stage: scan forbidden comment patterns
[INFO] [stderr] warning: convert_genome@0.1.0:  build detail: forbidden comment scan identified 0 violation groups
[INFO] [stderr] warning: convert_genome@0.1.0:  build stage: scan allow(dead_code) attributes
[INFO] [stderr] warning: convert_genome@0.1.0:  build detail: allow(dead_code) scan identified 0 violation groups
[INFO] [stderr] warning: convert_genome@0.1.0:  build stage: scan #[ignore] test annotations
[INFO] [stderr] warning: convert_genome@0.1.0:  build detail: ignored test scan identified 0 violation groups
[INFO] [stderr] warning: convert_genome@0.1.0:  build stage: build script completed
[INFO] [stderr] warning: convert_genome@0.1.0:  build detail: Validation checks completed without errors
[INFO] [stderr]    Compiling tinystr v0.8.1
[INFO] [stderr]    Compiling potential_utf v0.1.3
[INFO] [stderr]    Compiling icu_collections v2.0.0
[INFO] [stderr]    Compiling icu_locale_core v2.0.0
[INFO] [stderr]    Compiling noodles v0.101.0
[INFO] [stderr]    Compiling icu_provider v2.0.0
[INFO] [stderr]    Compiling icu_properties v2.0.1
[INFO] [stderr]    Compiling icu_normalizer v2.0.0
[INFO] [stderr]    Compiling idna_adapter v1.2.1
[INFO] [stderr]    Compiling idna v1.1.0
[INFO] [stderr]    Compiling url v2.5.7
[INFO] [stderr]     Finished `dev` profile [unoptimized + debuginfo] target(s) in 41.41s
[INFO] running `Command { std: "docker" "inspect" "20cc21f949ef6a4d93c55294c4676ba2263900891cdb56cd645ff0f635b81a56", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "20cc21f949ef6a4d93c55294c4676ba2263900891cdb56cd645ff0f635b81a56", kill_on_drop: false }`
[INFO] [stdout] 20cc21f949ef6a4d93c55294c4676ba2263900891cdb56cd645ff0f635b81a56
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-5-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-5-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:4848fb76d95f26979359cc7e45710b1dbc8f3acb7aeedee7c460d7702230f228" "/opt/rustwide/cargo-home/bin/cargo" "+c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] 0b87e38682829b78c91cd6e18fda028a80fabd6155db878a4aeddce8a43e2116
[INFO] running `Command { std: "docker" "start" "-a" "0b87e38682829b78c91cd6e18fda028a80fabd6155db878a4aeddce8a43e2116", kill_on_drop: false }`
[INFO] [stderr]    Compiling aho-corasick v1.1.3
[INFO] [stderr]    Compiling getrandom v0.3.4
[INFO] [stderr]    Compiling zerocopy-derive v0.8.27
[INFO] [stderr]    Compiling serde_json v1.0.145
[INFO] [stderr]    Compiling serde v1.0.228
[INFO] [stderr]    Compiling doc-comment v0.3.4
[INFO] [stderr]    Compiling predicates-core v1.0.9
[INFO] [stderr]    Compiling wait-timeout v0.2.1
[INFO] [stderr]    Compiling difflib v0.4.0
[INFO] [stderr]    Compiling termtree v0.5.1
[INFO] [stderr]    Compiling assert_cmd v2.0.17
[INFO] [stderr]    Compiling bit-set v0.8.0
[INFO] [stderr]    Compiling criterion-plot v0.6.0
[INFO] [stderr]    Compiling unarray v0.1.4
[INFO] [stderr]    Compiling yansi v1.0.1
[INFO] [stderr]    Compiling tempfile v3.23.0
[INFO] [stderr]    Compiling rand_core v0.9.3
[INFO] [stderr]    Compiling predicates-tree v1.0.12
[INFO] [stderr]    Compiling predicates v3.1.3
[INFO] [stderr]    Compiling rusty-fork v0.3.1
[INFO] [stderr]    Compiling pretty_assertions v1.4.1
[INFO] [stderr]    Compiling rand v0.9.2
[INFO] [stderr]    Compiling rand_xorshift v0.4.0
[INFO] [stderr]    Compiling regex-automata v0.4.13
[INFO] [stderr]    Compiling url v2.5.7
[INFO] [stderr]    Compiling tinytemplate v1.2.1
[INFO] [stderr]    Compiling zerocopy v0.8.27
[INFO] [stderr]    Compiling half v2.7.1
[INFO] [stderr]    Compiling ppv-lite86 v0.2.21
[INFO] [stderr]    Compiling bstr v1.12.1
[INFO] [stderr]    Compiling matchers v0.2.0
[INFO] [stderr]    Compiling regex v1.12.2
[INFO] [stderr]    Compiling tracing-subscriber v0.3.20
[INFO] [stderr]    Compiling ciborium-ll v0.2.2
[INFO] [stderr]    Compiling rand_chacha v0.9.0
[INFO] [stderr]    Compiling ciborium v0.2.2
[INFO] [stderr]    Compiling grep-searcher v0.1.16
[INFO] [stderr]    Compiling globset v0.4.18
[INFO] [stderr]    Compiling grep-regex v0.1.14
[INFO] [stderr]    Compiling noodles-core v0.18.0
[INFO] [stderr]    Compiling noodles-csi v0.51.0
[INFO] [stderr]    Compiling noodles-fasta v0.56.0
[INFO] [stderr]    Compiling grep-printer v0.3.1
[INFO] [stderr]    Compiling grep-cli v0.1.12
[INFO] [stderr]    Compiling criterion v0.7.0
[INFO] [stderr]    Compiling proptest v1.9.0
[INFO] [stderr]    Compiling ignore v0.4.24
[INFO] [stderr]    Compiling noodles-tabix v0.57.0
[INFO] [stderr]    Compiling grep v0.4.1
[INFO] [stderr]    Compiling noodles-vcf v0.81.0
[INFO] [stderr]    Compiling convert_genome v0.1.0 (/opt/rustwide/workdir)
[INFO] [stderr]    Compiling globwalk v0.9.1
[INFO] [stderr]    Compiling assert_fs v1.1.3
[INFO] [stderr]    Compiling noodles-bcf v0.78.0
[INFO] [stderr] warning: convert_genome@0.1.0:  build stage: initialization
[INFO] [stderr] warning: convert_genome@0.1.0:  build stage: manual lint self-check
[INFO] [stderr] warning: convert_genome@0.1.0:  build stage: manual lint self-check: running rustc
[INFO] [stderr] warning: convert_genome@0.1.0:  build detail: manual lint self-check: selected rustc executable: "/opt/rustwide/rustup-home/toolchains/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/bin/rustc"
[INFO] [stderr] warning: convert_genome@0.1.0:  build detail: manual lint self-check: HOST environment: "x86_64-unknown-linux-gnu"
[INFO] [stderr] warning: convert_genome@0.1.0:  build detail: manual lint self-check: TARGET environment: "x86_64-unknown-linux-gnu"
[INFO] [stderr] warning: convert_genome@0.1.0:  build detail: manual lint self-check: cfg target arch: "x86_64"
[INFO] [stderr] warning: convert_genome@0.1.0:  build detail: manual lint self-check: build context arch/os: x86_64 / linux
[INFO] [stderr] warning: convert_genome@0.1.0:  build stage: manual lint self-check: preparing rustc command
[INFO] [stderr] warning: convert_genome@0.1.0:  build detail: manual lint self-check: command preview: "/opt/rustwide/rustup-home/toolchains/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/bin/rustc" "--edition" "2021" "-D" "unused_variables" "-D" "dead_code" "-D" "unused_imports" "--crate-type" "bin" "--error-format" "human" "-o" "/opt/rustwide/target/debug/build/convert_genome-eddd55ec68bfe722/out/build_lint_check" "-L" "dependency=/opt/rustwide/target/debug/deps" "--extern" "grep=/opt/rustwide/target/debug/deps/libgrep-363fe2a53a399de9.rlib" "--extern" "walkdir=/opt/rustwide/target/debug/deps/libwalkdir-1a00c768f8c7f3de.rlib" "/opt/rustwide/workdir/build.rs"
[INFO] [stderr] warning: convert_genome@0.1.0:  build detail: manual lint self-check: current dir before spawn: "/opt/rustwide/workdir"
[INFO] [stderr] warning: convert_genome@0.1.0:  build stage: manual lint self-check: invoking rustc
[INFO] [stderr] warning: convert_genome@0.1.0:  build detail: manual lint self-check: calling Command::output() for rustc self-lint
[INFO] [stderr] warning: convert_genome@0.1.0:  build stage: manual lint self-check: rustc invocation returned
[INFO] [stderr] warning: convert_genome@0.1.0:  build detail: manual lint self-check: rustc exit status: Some(0)
[INFO] [stderr] warning: convert_genome@0.1.0:  build detail: manual lint self-check: rustc stdout bytes: 0 / stderr bytes: 0
[INFO] [stderr] warning: convert_genome@0.1.0:  build detail: Completed rustc self-lint for build.rs
[INFO] [stderr] warning: convert_genome@0.1.0:  build stage: scan underscore-prefixed bindings
[INFO] [stderr] warning: convert_genome@0.1.0:  build detail: underscore scan identified 0 violation groups
[INFO] [stderr] warning: convert_genome@0.1.0:  build stage: scan forbidden comment patterns
[INFO] [stderr] warning: convert_genome@0.1.0:  build detail: forbidden comment scan identified 0 violation groups
[INFO] [stderr] warning: convert_genome@0.1.0:  build stage: scan allow(dead_code) attributes
[INFO] [stderr] warning: convert_genome@0.1.0:  build detail: allow(dead_code) scan identified 0 violation groups
[INFO] [stderr] warning: convert_genome@0.1.0:  build stage: scan #[ignore] test annotations
[INFO] [stderr] warning: convert_genome@0.1.0:  build detail: ignored test scan identified 0 violation groups
[INFO] [stderr] warning: convert_genome@0.1.0:  build stage: build script completed
[INFO] [stderr] warning: convert_genome@0.1.0:  build detail: Validation checks completed without errors
[INFO] [stderr]    Compiling noodles v0.101.0
[INFO] [stderr]     Finished `test` profile [unoptimized + debuginfo] target(s) in 28.80s
[INFO] running `Command { std: "docker" "inspect" "0b87e38682829b78c91cd6e18fda028a80fabd6155db878a4aeddce8a43e2116", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "0b87e38682829b78c91cd6e18fda028a80fabd6155db878a4aeddce8a43e2116", kill_on_drop: false }`
[INFO] [stdout] 0b87e38682829b78c91cd6e18fda028a80fabd6155db878a4aeddce8a43e2116
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-5-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-5-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:4848fb76d95f26979359cc7e45710b1dbc8f3acb7aeedee7c460d7702230f228" "/opt/rustwide/cargo-home/bin/cargo" "+c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38" "test" "--frozen", kill_on_drop: false }`
[INFO] [stdout] cdd75559825e05ee6e1943b10a94b6928e96df8d9298ea8611c0a8c8a79f6880
[INFO] running `Command { std: "docker" "start" "-a" "cdd75559825e05ee6e1943b10a94b6928e96df8d9298ea8611c0a8c8a79f6880", kill_on_drop: false }`
[INFO] [stderr] warning: convert_genome@0.1.0:  build stage: initialization
[INFO] [stderr] warning: convert_genome@0.1.0:  build stage: manual lint self-check
[INFO] [stderr] warning: convert_genome@0.1.0:  build stage: manual lint self-check: running rustc
[INFO] [stderr] warning: convert_genome@0.1.0:  build detail: manual lint self-check: selected rustc executable: "/opt/rustwide/rustup-home/toolchains/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/bin/rustc"
[INFO] [stderr] warning: convert_genome@0.1.0:  build detail: manual lint self-check: HOST environment: "x86_64-unknown-linux-gnu"
[INFO] [stderr] warning: convert_genome@0.1.0:  build detail: manual lint self-check: TARGET environment: "x86_64-unknown-linux-gnu"
[INFO] [stderr] warning: convert_genome@0.1.0:  build detail: manual lint self-check: cfg target arch: "x86_64"
[INFO] [stderr] warning: convert_genome@0.1.0:  build detail: manual lint self-check: build context arch/os: x86_64 / linux
[INFO] [stderr] warning: convert_genome@0.1.0:  build stage: manual lint self-check: preparing rustc command
[INFO] [stderr] warning: convert_genome@0.1.0:  build detail: manual lint self-check: command preview: "/opt/rustwide/rustup-home/toolchains/c90bcb9571b7aab0d8beaa2ce8a998ffaf079d38/bin/rustc" "--edition" "2021" "-D" "unused_variables" "-D" "dead_code" "-D" "unused_imports" "--crate-type" "bin" "--error-format" "human" "-o" "/opt/rustwide/target/debug/build/convert_genome-eddd55ec68bfe722/out/build_lint_check" "-L" "dependency=/opt/rustwide/target/debug/deps" "--extern" "grep=/opt/rustwide/target/debug/deps/libgrep-363fe2a53a399de9.rlib" "--extern" "walkdir=/opt/rustwide/target/debug/deps/libwalkdir-1a00c768f8c7f3de.rlib" "/opt/rustwide/workdir/build.rs"
[INFO] [stderr] warning: convert_genome@0.1.0:  build detail: manual lint self-check: current dir before spawn: "/opt/rustwide/workdir"
[INFO] [stderr] warning: convert_genome@0.1.0:  build stage: manual lint self-check: invoking rustc
[INFO] [stderr] warning: convert_genome@0.1.0:  build detail: manual lint self-check: calling Command::output() for rustc self-lint
[INFO] [stderr] warning: convert_genome@0.1.0:  build stage: manual lint self-check: rustc invocation returned
[INFO] [stderr] warning: convert_genome@0.1.0:  build detail: manual lint self-check: rustc exit status: Some(0)
[INFO] [stderr] warning: convert_genome@0.1.0:  build detail: manual lint self-check: rustc stdout bytes: 0 / stderr bytes: 0
[INFO] [stderr] warning: convert_genome@0.1.0:  build detail: Completed rustc self-lint for build.rs
[INFO] [stderr] warning: convert_genome@0.1.0:  build stage: scan underscore-prefixed bindings
[INFO] [stderr] warning: convert_genome@0.1.0:  build detail: underscore scan identified 0 violation groups
[INFO] [stderr] warning: convert_genome@0.1.0:  build stage: scan forbidden comment patterns
[INFO] [stderr] warning: convert_genome@0.1.0:  build detail: forbidden comment scan identified 0 violation groups
[INFO] [stderr] warning: convert_genome@0.1.0:  build stage: scan allow(dead_code) attributes
[INFO] [stderr] warning: convert_genome@0.1.0:  build detail: allow(dead_code) scan identified 0 violation groups
[INFO] [stderr] warning: convert_genome@0.1.0:  build stage: scan #[ignore] test annotations
[INFO] [stderr] warning: convert_genome@0.1.0:  build detail: ignored test scan identified 0 violation groups
[INFO] [stderr] warning: convert_genome@0.1.0:  build stage: build script completed
[INFO] [stderr] warning: convert_genome@0.1.0:  build detail: Validation checks completed without errors
[INFO] [stderr]     Finished `test` profile [unoptimized + debuginfo] target(s) in 0.53s
[INFO] [stderr]      Running unittests src/lib.rs (/opt/rustwide/target/debug/deps/convert_genome-01c2ef03bc064183)
[INFO] [stdout] 
[INFO] [stdout] running 9 tests
[INFO] [stdout] test conversion::tests::format_genotype_strings ... ok
[INFO] [stdout] test conversion::tests::genotype_parsing ... ok
[INFO] [stdout] test dtc::tests::reader_skips_comments ... ok
[INFO] [stdout] test dtc::tests::parse_basic_record ... ok
[INFO] [stdout] test conversion::tests::build_header_sets_contigs_and_metadata ... ok
[INFO] [stdout] test reference::tests::reference_fetches_base ... ok
[INFO] [stdout] test remote::tests::decompresses_gzip_files ... ok
[INFO] [stdout] test remote::tests::extracts_zip_archives ... ok
[INFO] [stdout] test remote::tests::extracts_nested_compressed_files ... ok
[INFO] [stdout] 
[INFO] [stdout] test result: ok. 9 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.01s
[INFO] [stdout] 
[INFO] [stderr]      Running unittests src/main.rs (/opt/rustwide/target/debug/deps/convert_genome-f35cb7f2c056bf72)
[INFO] [stderr]      Running tests/integration_test.rs (/opt/rustwide/target/debug/deps/integration_test-66e99a2bcc1d118d)
[INFO] [stdout] 
[INFO] [stdout] running 0 tests
[INFO] [stdout] 
[INFO] [stdout] test result: ok. 0 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.00s
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] running 5 tests
[INFO] [stdout] test handles_empty_input ... ok
[INFO] [stdout] test reports_unknown_chromosomes ... ok
[INFO] [stdout] test reference_cache_populates ... ok
[INFO] [stdout] test parallel_matches_single_thread ... ok
[INFO] [stdout] test converts_to_vcf_and_bcf ... ok
[INFO] [stdout] 
[INFO] [stdout] test result: ok. 5 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.02s
[INFO] [stdout] 
[INFO] [stderr]      Running tests/proptest.rs (/opt/rustwide/target/debug/deps/proptest-dee707e9d3760df8)
[INFO] [stdout] 
[INFO] [stdout] running 5 tests
[INFO] [stdout] test genotype_parsing_round_trips ... ok
[INFO] [stdout] test invalid_alleles_are_rejected ... ok
[INFO] [stdout] test reader_handles_arbitrary_input ... ok
[INFO] [stdout] test reference_lookup_returns_bases ... ok
[INFO] [stdout] test concurrent_reference_access ... ok
[INFO] [stdout] 
[INFO] [stdout] test result: ok. 5 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.69s
[INFO] [stdout] 
[INFO] [stderr]    Doc-tests convert_genome
[INFO] [stdout] 
[INFO] [stdout] running 0 tests
[INFO] [stdout] 
[INFO] [stdout] test result: ok. 0 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.00s
[INFO] [stdout] 
[INFO] running `Command { std: "docker" "inspect" "cdd75559825e05ee6e1943b10a94b6928e96df8d9298ea8611c0a8c8a79f6880", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "cdd75559825e05ee6e1943b10a94b6928e96df8d9298ea8611c0a8c8a79f6880", kill_on_drop: false }`
[INFO] [stdout] cdd75559825e05ee6e1943b10a94b6928e96df8d9298ea8611c0a8c8a79f6880
