[INFO] cloning repository https://github.com/kblin/nrps-rs [INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/kblin/nrps-rs" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fkblin%2Fnrps-rs", kill_on_drop: false }` [INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fkblin%2Fnrps-rs'... [INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }` [INFO] [stdout] 1e534938a2e03875d0f070c6f959ffa8919c7a8c [INFO] testing kblin/nrps-rs against try#9f93af291970322f4f1c6315ccde4d7078201159 for pr-146098-6 [INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fkblin%2Fnrps-rs" "/workspace/builds/worker-5-tc2/source", kill_on_drop: false }` [INFO] [stderr] Cloning into '/workspace/builds/worker-5-tc2/source'... [INFO] [stderr] done. [INFO] started tweaking git repo https://github.com/kblin/nrps-rs [INFO] finished tweaking git repo https://github.com/kblin/nrps-rs [INFO] tweaked toml for git repo https://github.com/kblin/nrps-rs written to /workspace/builds/worker-5-tc2/source/Cargo.toml [INFO] validating manifest of git repo https://github.com/kblin/nrps-rs on toolchain 9f93af291970322f4f1c6315ccde4d7078201159 [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+9f93af291970322f4f1c6315ccde4d7078201159" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] crate git repo https://github.com/kblin/nrps-rs already has a lockfile, it will not be regenerated [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+9f93af291970322f4f1c6315ccde4d7078201159" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] [stderr] Updating crates.io index [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] [stderr] Downloading crates ... [INFO] [stderr] Downloaded rstest_macros v0.16.0 [INFO] [stderr] Downloaded toml v0.7.8 [INFO] [stderr] Downloaded assert_approx_eq v1.1.0 [INFO] [stderr] Downloaded rstest v0.16.0 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-5-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-5-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:4848fb76d95f26979359cc7e45710b1dbc8f3acb7aeedee7c460d7702230f228" "/opt/rustwide/cargo-home/bin/cargo" "+9f93af291970322f4f1c6315ccde4d7078201159" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] 441e1ae9cb623b6c1c6397fd1d136bc9d05149b43c20a874f5fc093aaf32af3d [INFO] running `Command { std: "docker" "start" "-a" "441e1ae9cb623b6c1c6397fd1d136bc9d05149b43c20a874f5fc093aaf32af3d", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "441e1ae9cb623b6c1c6397fd1d136bc9d05149b43c20a874f5fc093aaf32af3d", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "441e1ae9cb623b6c1c6397fd1d136bc9d05149b43c20a874f5fc093aaf32af3d", kill_on_drop: false }` [INFO] [stdout] 441e1ae9cb623b6c1c6397fd1d136bc9d05149b43c20a874f5fc093aaf32af3d [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-5-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-5-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:4848fb76d95f26979359cc7e45710b1dbc8f3acb7aeedee7c460d7702230f228" "/opt/rustwide/cargo-home/bin/cargo" "+9f93af291970322f4f1c6315ccde4d7078201159" "build" "--frozen" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] da76da08e0ef69d8076cd2812db51368dd918d5422b4ad606263141e85dbd874 [INFO] running `Command { std: "docker" "start" "-a" "da76da08e0ef69d8076cd2812db51368dd918d5422b4ad606263141e85dbd874", kill_on_drop: false }` [INFO] [stderr] Compiling serde v1.0.196 [INFO] [stderr] Compiling siphasher v0.3.11 [INFO] [stderr] Compiling rand_core v0.6.4 [INFO] [stderr] Compiling indexmap v2.2.3 [INFO] [stderr] Compiling anstream v0.6.12 [INFO] [stderr] Compiling winnow v0.5.40 [INFO] [stderr] Compiling syn v2.0.49 [INFO] [stderr] Compiling walkdir v2.4.0 [INFO] [stderr] Compiling phf_shared v0.11.2 [INFO] [stderr] Compiling rand v0.8.5 [INFO] [stderr] Compiling clap_builder v4.5.1 [INFO] [stderr] Compiling phf_generator v0.11.2 [INFO] [stderr] Compiling serde_derive v1.0.196 [INFO] [stderr] Compiling thiserror-impl v1.0.57 [INFO] [stderr] Compiling clap_derive v4.5.0 [INFO] [stderr] Compiling phf_macros v0.11.2 [INFO] [stderr] Compiling phf v0.11.2 [INFO] [stderr] Compiling thiserror v1.0.57 [INFO] [stderr] Compiling clap v4.5.1 [INFO] [stderr] Compiling toml_datetime v0.6.5 [INFO] [stderr] Compiling serde_spanned v0.6.5 [INFO] [stderr] Compiling toml_edit v0.19.15 [INFO] [stderr] Compiling toml v0.7.8 [INFO] [stderr] Compiling nrps-rs v0.2.1 (/opt/rustwide/workdir) [INFO] [stderr] Finished `dev` profile [unoptimized + debuginfo] target(s) in 22.52s [INFO] running `Command { std: "docker" "inspect" "da76da08e0ef69d8076cd2812db51368dd918d5422b4ad606263141e85dbd874", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "da76da08e0ef69d8076cd2812db51368dd918d5422b4ad606263141e85dbd874", kill_on_drop: false }` [INFO] [stdout] da76da08e0ef69d8076cd2812db51368dd918d5422b4ad606263141e85dbd874 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-5-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-5-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:4848fb76d95f26979359cc7e45710b1dbc8f3acb7aeedee7c460d7702230f228" "/opt/rustwide/cargo-home/bin/cargo" "+9f93af291970322f4f1c6315ccde4d7078201159" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] f11f252aebefdf19c7ce81283540483c774aeecb5e54c056df9dc423e88b9e4d [INFO] running `Command { std: "docker" "start" "-a" "f11f252aebefdf19c7ce81283540483c774aeecb5e54c056df9dc423e88b9e4d", kill_on_drop: false }` [INFO] [stderr] Compiling semver v1.0.21 [INFO] [stderr] Compiling futures-macro v0.3.30 [INFO] [stderr] Compiling syn v1.0.109 [INFO] [stderr] Compiling cfg-if v1.0.0 [INFO] [stderr] Compiling futures-timer v3.0.2 [INFO] [stderr] Compiling assert_approx_eq v1.1.0 [INFO] [stderr] Compiling futures-util v0.3.30 [INFO] [stderr] Compiling rustc_version v0.4.0 [INFO] [stderr] Compiling rstest_macros v0.16.0 [INFO] [stderr] Compiling futures-executor v0.3.30 [INFO] [stderr] Compiling futures v0.3.30 [INFO] [stderr] Compiling rstest v0.16.0 [INFO] [stderr] Compiling nrps-rs v0.2.1 (/opt/rustwide/workdir) [INFO] [stderr] Finished `test` profile [unoptimized + debuginfo] target(s) in 10.67s [INFO] running `Command { std: "docker" "inspect" "f11f252aebefdf19c7ce81283540483c774aeecb5e54c056df9dc423e88b9e4d", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "f11f252aebefdf19c7ce81283540483c774aeecb5e54c056df9dc423e88b9e4d", kill_on_drop: false }` [INFO] [stdout] f11f252aebefdf19c7ce81283540483c774aeecb5e54c056df9dc423e88b9e4d [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-5-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-5-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:4848fb76d95f26979359cc7e45710b1dbc8f3acb7aeedee7c460d7702230f228" "/opt/rustwide/cargo-home/bin/cargo" "+9f93af291970322f4f1c6315ccde4d7078201159" "test" "--frozen", kill_on_drop: false }` [INFO] [stdout] 00a040a4325ae5323f5a2222d197cc4899c9c31616907781f067cc86b8c36a7e [INFO] running `Command { std: "docker" "start" "-a" "00a040a4325ae5323f5a2222d197cc4899c9c31616907781f067cc86b8c36a7e", kill_on_drop: false }` [INFO] [stderr] Finished `test` profile [unoptimized + debuginfo] target(s) in 0.08s [INFO] [stderr] Running unittests src/lib.rs (/opt/rustwide/target/debug/deps/nrps_rs-1413b26e8df55628) [INFO] [stdout] [INFO] [stdout] running 26 tests [INFO] [stdout] test config::tests::test_model_dir_default ... ok [INFO] [stdout] test config::tests::test_override_model_dir ... ok [INFO] [stdout] test config::tests::test_override_stach ... ok [INFO] [stdout] test config::tests::test_skip_v1 ... ok [INFO] [stdout] test config::tests::test_stach_extra ... ok [INFO] [stdout] test config::tests::test_skip_v2 ... ok [INFO] [stdout] test config::tests::test_skip_v3 ... ok [INFO] [stdout] test encodings::rausch::tests::test_rausch_encoder ... ok [INFO] [stdout] test encodings::rausch::tests::test_rausch_legacy_concatenation ... ok [INFO] [stdout] test encodings::wold::tests::test_wold_encoder ... ok [INFO] [stdout] test encodings::tests::test_get_value ... ok [INFO] [stdout] test predictors::predictions::tests::test_get_best ... ok [INFO] [stdout] test predictors::predictions::tests::test_add ... ok [INFO] [stdout] test predictors::stachelhaus::tests::test_calculate_score ... ok [INFO] [stdout] test predictors::stachelhaus::tests::test_extract_aa10_error ... ok [INFO] [stdout] test predictors::stachelhaus::tests::test_extract_aa10 ... ok [INFO] [stdout] test svm::vectors::tests::test_dist ... ok [INFO] [stdout] test svm::vectors::tests::test_similarity ... ok [INFO] [stdout] test config::tests::test_override_both ... ok [INFO] [stdout] test svm::vectors::tests::test_element_subtract ... ok [INFO] [stdout] test svm::vectors::tests::test_square_dist ... ok [INFO] [stdout] test svm::vectors::tests::test_from_line ... ok [INFO] [stdout] test predictors::stachelhaus::tests::test_hamming_dist ... ok [INFO] [stdout] test config::tests::test_skip_stachelhaus ... ok [INFO] [stdout] test tests::test_parse_domains ... ok [INFO] [stdout] test config::tests::test_model_dir_set ... ok [INFO] [stderr] Running unittests src/main.rs (/opt/rustwide/target/debug/deps/nrps_rs-e6bb70827efcd5f5) [INFO] [stdout] [INFO] [stdout] test result: ok. 26 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.07s [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] running 0 tests [INFO] [stderr] Doc-tests nrps_rs [INFO] [stdout] [INFO] [stdout] test result: ok. 0 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.00s [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] running 0 tests [INFO] [stdout] [INFO] [stdout] test result: ok. 0 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.00s [INFO] [stdout] [INFO] running `Command { std: "docker" "inspect" "00a040a4325ae5323f5a2222d197cc4899c9c31616907781f067cc86b8c36a7e", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "00a040a4325ae5323f5a2222d197cc4899c9c31616907781f067cc86b8c36a7e", kill_on_drop: false }` [INFO] [stdout] 00a040a4325ae5323f5a2222d197cc4899c9c31616907781f067cc86b8c36a7e