[INFO] cloning repository https://github.com/8051Enthusiast/biodiff
[INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/8051Enthusiast/biodiff" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2F8051Enthusiast%2Fbiodiff", kill_on_drop: false }`
[INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2F8051Enthusiast%2Fbiodiff'...
[INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }`
[INFO] [stdout] 7df6377aa2d260e7bb754f51f0c2f9bc601fc768
[INFO] testing 8051Enthusiast/biodiff against try#9f93af291970322f4f1c6315ccde4d7078201159 for pr-146098-6
[INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2F8051Enthusiast%2Fbiodiff" "/workspace/builds/worker-5-tc2/source", kill_on_drop: false }`
[INFO] [stderr] Cloning into '/workspace/builds/worker-5-tc2/source'...
[INFO] [stderr] done.
[INFO] started tweaking git repo https://github.com/8051Enthusiast/biodiff
[INFO] finished tweaking git repo https://github.com/8051Enthusiast/biodiff
[INFO] tweaked toml for git repo https://github.com/8051Enthusiast/biodiff written to /workspace/builds/worker-5-tc2/source/Cargo.toml
[INFO] validating manifest of git repo https://github.com/8051Enthusiast/biodiff on toolchain 9f93af291970322f4f1c6315ccde4d7078201159
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+9f93af291970322f4f1c6315ccde4d7078201159" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] crate git repo https://github.com/8051Enthusiast/biodiff already has a lockfile, it will not be regenerated
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+9f93af291970322f4f1c6315ccde4d7078201159" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-5-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-5-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:4848fb76d95f26979359cc7e45710b1dbc8f3acb7aeedee7c460d7702230f228" "/opt/rustwide/cargo-home/bin/cargo" "+9f93af291970322f4f1c6315ccde4d7078201159" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] [stdout] 02ae8371881b380fc81edcb739fa4402cc27bdd69e1f6072131b47530e7dc4c6
[INFO] running `Command { std: "docker" "start" "-a" "02ae8371881b380fc81edcb739fa4402cc27bdd69e1f6072131b47530e7dc4c6", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "02ae8371881b380fc81edcb739fa4402cc27bdd69e1f6072131b47530e7dc4c6", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "02ae8371881b380fc81edcb739fa4402cc27bdd69e1f6072131b47530e7dc4c6", kill_on_drop: false }`
[INFO] [stdout] 02ae8371881b380fc81edcb739fa4402cc27bdd69e1f6072131b47530e7dc4c6
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-5-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-5-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:4848fb76d95f26979359cc7e45710b1dbc8f3acb7aeedee7c460d7702230f228" "/opt/rustwide/cargo-home/bin/cargo" "+9f93af291970322f4f1c6315ccde4d7078201159" "build" "--frozen" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] 3c7eccbab240d2829b989a4ac42b74d3c9edfe5732519c742361549311508400
[INFO] running `Command { std: "docker" "start" "-a" "3c7eccbab240d2829b989a4ac42b74d3c9edfe5732519c742361549311508400", kill_on_drop: false }`
[INFO] [stderr]    Compiling autocfg v1.2.0
[INFO] [stderr]    Compiling proc-macro2 v1.0.79
[INFO] [stderr]    Compiling unicode-ident v1.0.12
[INFO] [stderr]    Compiling libc v0.2.153
[INFO] [stderr]    Compiling libm v0.2.8
[INFO] [stderr]    Compiling cfg-if v1.0.0
[INFO] [stderr]    Compiling version_check v0.9.4
[INFO] [stderr]    Compiling memchr v2.7.2
[INFO] [stderr]    Compiling syn v1.0.109
[INFO] [stderr]    Compiling serde v1.0.197
[INFO] [stderr]    Compiling ident_case v1.0.1
[INFO] [stderr]    Compiling fnv v1.0.7
[INFO] [stderr]    Compiling itoa v1.0.11
[INFO] [stderr]    Compiling lazy_static v1.4.0
[INFO] [stderr]    Compiling bytemuck v1.15.0
[INFO] [stderr]    Compiling paste v1.0.14
[INFO] [stderr]    Compiling ppv-lite86 v0.2.17
[INFO] [stderr]    Compiling rustversion v1.0.15
[INFO] [stderr]    Compiling rawpointer v0.2.1
[INFO] [stderr]    Compiling log v0.4.21
[INFO] [stderr]    Compiling crossbeam-utils v0.8.19
[INFO] [stderr]    Compiling typenum v1.17.0
[INFO] [stderr]    Compiling regex-syntax v0.8.3
[INFO] [stderr]    Compiling semver v0.1.20
[INFO] [stderr]    Compiling thiserror v1.0.58
[INFO] [stderr]    Compiling num-traits v0.2.18
[INFO] [stderr]    Compiling num-rational v0.4.1
[INFO] [stderr]    Compiling matrixmultiply v0.3.8
[INFO] [stderr]    Compiling ahash v0.8.11
[INFO] [stderr]    Compiling lock_api v0.4.11
[INFO] [stderr]    Compiling parking_lot_core v0.9.9
[INFO] [stderr]    Compiling rustc_version v0.1.7
[INFO] [stderr]    Compiling safe_arch v0.7.1
[INFO] [stderr]    Compiling feature-probe v0.1.1
[INFO] [stderr]    Compiling signal-hook v0.3.17
[INFO] [stderr]    Compiling cc v1.0.92
[INFO] [stderr]    Compiling smallvec v1.13.2
[INFO] [stderr]    Compiling newtype_derive v0.1.6
[INFO] [stderr]    Compiling deranged v0.3.11
[INFO] [stderr]    Compiling bv v0.11.1
[INFO] [stderr]    Compiling aho-corasick v1.1.3
[INFO] [stderr]    Compiling quote v1.0.36
[INFO] [stderr]    Compiling ryu v1.0.17
[INFO] [stderr]    Compiling syn v2.0.58
[INFO] [stderr]    Compiling getrandom v0.2.14
[INFO] [stderr]    Compiling wide v0.7.15
[INFO] [stderr]    Compiling signal-hook-registry v1.4.1
[INFO] [stderr]    Compiling rand_core v0.6.4
[INFO] [stderr]    Compiling num_threads v0.1.7
[INFO] [stderr]    Compiling stable_deref_trait v1.2.0
[INFO] [stderr]    Compiling zerocopy v0.7.32
[INFO] [stderr]    Compiling rand_chacha v0.3.1
[INFO] [stderr]    Compiling utf8parse v0.2.1
[INFO] [stderr]    Compiling anyhow v1.0.82
[INFO] [stderr]    Compiling hashbrown v0.14.3
[INFO] [stderr]    Compiling time-core v0.1.2
[INFO] [stderr]    Compiling once_cell v1.19.0
[INFO] [stderr]    Compiling equivalent v1.0.1
[INFO] [stderr]    Compiling heck v0.4.1
[INFO] [stderr]    Compiling time v0.3.35
[INFO] [stderr]    Compiling rand v0.8.5
[INFO] [stderr]    Compiling num-integer v0.1.46
[INFO] [stderr]    Compiling num-complex v0.4.5
[INFO] [stderr]    Compiling approx v0.5.1
[INFO] [stderr]    Compiling cmake v0.1.50
[INFO] [stderr]    Compiling crossbeam-channel v0.5.12
[INFO] [stderr]    Compiling num-iter v0.1.44
[INFO] [stderr]    Compiling anstyle-parse v0.2.3
[INFO] [stderr]    Compiling owning_ref v0.4.1
[INFO] [stderr]    Compiling mio v0.8.11
[INFO] [stderr]    Compiling indexmap v2.2.6
[INFO] [stderr]    Compiling csv-core v0.1.11
[INFO] [stderr]    Compiling regex-automata v0.4.6
[INFO] [stderr]    Compiling rand_distr v0.4.3
[INFO] [stderr]    Compiling num v0.4.1
[INFO] [stderr]    Compiling rustfft v6.2.0
[INFO] [stderr]    Compiling biodiff-wfa2-sys v2.3.5 (/opt/rustwide/workdir/biodiff-wfa2-sys)
[INFO] [stderr]    Compiling anstyle v1.0.6
[INFO] [stderr]    Compiling unicode-width v0.1.11
[INFO] [stderr]    Compiling bit-vec v0.6.3
[INFO] [stderr]    Compiling xi-unicode v0.3.0
[INFO] [stderr]    Compiling strength_reduce v0.2.4
[INFO] [stderr]    Compiling fixedbitset v0.4.2
[INFO] [stderr]    Compiling unicode-segmentation v1.11.0
[INFO] [stderr]    Compiling colorchoice v1.0.0
[INFO] [stderr]    Compiling anstyle-query v1.0.2
[INFO] [stderr]    Compiling either v1.10.0
[INFO] [stderr]    Compiling transpose v0.2.3
[INFO] [stderr]    Compiling anstream v0.6.13
[INFO] [stderr]    Compiling petgraph v0.6.4
[INFO] [stderr]    Compiling signal-hook-mio v0.2.3
[INFO] [stderr] error: failed to run custom build command for `biodiff-wfa2-sys v2.3.5 (/opt/rustwide/workdir/biodiff-wfa2-sys)`
[INFO] [stderr] note: To improve backtraces for build dependencies, set the CARGO_PROFILE_DEV_BUILD_OVERRIDE_DEBUG=true environment variable to enable debug information generation.
[INFO] [stderr] 
[INFO] [stderr] Caused by:
[INFO] [stderr]   process didn't exit successfully: `/opt/rustwide/target/debug/build/biodiff-wfa2-sys-35f1f66724962f83/build-script-build` (exit status: 1)
[INFO] [stderr]   --- stderr
[INFO] [stderr]   The WFA2 submodule is not present. Please run `git submodule update --init` to fetch it.
[INFO] [stderr] warning: build failed, waiting for other jobs to finish...
[INFO] running `Command { std: "docker" "inspect" "3c7eccbab240d2829b989a4ac42b74d3c9edfe5732519c742361549311508400", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "3c7eccbab240d2829b989a4ac42b74d3c9edfe5732519c742361549311508400", kill_on_drop: false }`
[INFO] [stdout] 3c7eccbab240d2829b989a4ac42b74d3c9edfe5732519c742361549311508400
