[INFO] fetching crate packbed 0.0.8... [INFO] testing packbed-0.0.8 against master#caccb4d0368bd918ef6668af8e13834d07040417 for pr-146098-1 [INFO] extracting crate packbed 0.0.8 into /workspace/builds/worker-1-tc1/source [INFO] started tweaking crates.io crate packbed 0.0.8 [INFO] finished tweaking crates.io crate packbed 0.0.8 [INFO] tweaked toml for crates.io crate packbed 0.0.8 written to /workspace/builds/worker-1-tc1/source/Cargo.toml [INFO] validating manifest of crates.io crate packbed 0.0.8 on toolchain caccb4d0368bd918ef6668af8e13834d07040417 [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+caccb4d0368bd918ef6668af8e13834d07040417" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] crate crates.io crate packbed 0.0.8 already has a lockfile, it will not be regenerated [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+caccb4d0368bd918ef6668af8e13834d07040417" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] Downloading crates ... [INFO] [stderr] Downloaded clap_derive v4.5.18 [INFO] [stderr] Downloaded once_cell v1.20.1 [INFO] [stderr] Downloaded portable-atomic v1.9.0 [INFO] [stderr] Downloaded clap_builder v4.5.18 [INFO] [stderr] Downloaded clap v4.5.18 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-1-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-1-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:e90291280db7d1fac5b66fc6dad9f9662629e7365a55743daf9bdf73ebc4ea79" "/opt/rustwide/cargo-home/bin/cargo" "+caccb4d0368bd918ef6668af8e13834d07040417" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] 61ff3aa919de679ed53098b6459506aa2481eb1116e40b6bb1208b8678709c94 [INFO] running `Command { std: "docker" "start" "-a" "61ff3aa919de679ed53098b6459506aa2481eb1116e40b6bb1208b8678709c94", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "61ff3aa919de679ed53098b6459506aa2481eb1116e40b6bb1208b8678709c94", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "61ff3aa919de679ed53098b6459506aa2481eb1116e40b6bb1208b8678709c94", kill_on_drop: false }` [INFO] [stdout] 61ff3aa919de679ed53098b6459506aa2481eb1116e40b6bb1208b8678709c94 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-1-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-1-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:e90291280db7d1fac5b66fc6dad9f9662629e7365a55743daf9bdf73ebc4ea79" "/opt/rustwide/cargo-home/bin/cargo" "+caccb4d0368bd918ef6668af8e13834d07040417" "build" "--frozen" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] c56296bb713b35c6fc1cb5db600d1b68f84049a5218d85d8a34e90529fd16262 [INFO] running `Command { std: "docker" "start" "-a" "c56296bb713b35c6fc1cb5db600d1b68f84049a5218d85d8a34e90529fd16262", kill_on_drop: false }` [INFO] [stderr] Compiling proc-macro2 v1.0.86 [INFO] [stderr] Compiling unicode-ident v1.0.13 [INFO] [stderr] Compiling libc v0.2.159 [INFO] [stderr] Compiling crossbeam-utils v0.8.20 [INFO] [stderr] Compiling serde v1.0.210 [INFO] [stderr] Compiling num-traits v0.2.19 [INFO] [stderr] Compiling ahash v0.8.11 [INFO] [stderr] Compiling once_cell v1.20.1 [INFO] [stderr] Compiling anstyle-parse v0.2.5 [INFO] [stderr] Compiling anstyle-query v1.1.1 [INFO] [stderr] Compiling either v1.13.0 [INFO] [stderr] Compiling colorchoice v1.0.2 [INFO] [stderr] Compiling anstyle v1.0.8 [INFO] [stderr] Compiling rustix v0.38.37 [INFO] [stderr] Compiling anstream v0.6.15 [INFO] [stderr] Compiling allocator-api2 v0.2.18 [INFO] [stderr] Compiling smallvec v1.13.2 [INFO] [stderr] Compiling clap_lex v0.7.2 [INFO] [stderr] Compiling linux-raw-sys v0.4.14 [INFO] [stderr] Compiling quote v1.0.37 [INFO] [stderr] Compiling anyhow v1.0.89 [INFO] [stderr] Compiling crossbeam-epoch v0.9.18 [INFO] [stderr] Compiling syn v2.0.79 [INFO] [stderr] Compiling miniz_oxide v0.8.0 [INFO] [stderr] Compiling clap_builder v4.5.18 [INFO] [stderr] Compiling fastrand v2.1.1 [INFO] [stderr] Compiling crossbeam-deque v0.8.5 [INFO] [stderr] Compiling getrandom v0.2.15 [INFO] [stderr] Compiling rmp v0.8.14 [INFO] [stderr] Compiling rand_core v0.6.4 [INFO] [stderr] Compiling parking_lot_core v0.9.10 [INFO] [stderr] Compiling rayon-core v1.12.1 [INFO] [stderr] Compiling flate2 v1.0.34 [INFO] [stderr] Compiling num_cpus v1.16.0 [INFO] [stderr] Compiling memmap2 v0.9.5 [INFO] [stderr] Compiling rayon v1.10.0 [INFO] [stderr] Compiling tempfile v3.13.0 [INFO] [stderr] Compiling zerocopy-derive v0.7.35 [INFO] [stderr] Compiling serde_derive v1.0.210 [INFO] [stderr] Compiling clap_derive v4.5.18 [INFO] [stderr] Compiling zerocopy v0.7.35 [INFO] [stderr] Compiling ppv-lite86 v0.2.20 [INFO] [stderr] Compiling rand_chacha v0.3.1 [INFO] [stderr] Compiling clap v4.5.18 [INFO] [stderr] Compiling rand v0.8.5 [INFO] [stderr] Compiling hashbrown v0.14.5 [INFO] [stderr] Compiling rmp-serde v1.3.0 [INFO] [stderr] Compiling dashmap v6.1.0 [INFO] [stderr] Compiling packbed v0.0.8 (/opt/rustwide/workdir) [INFO] [stderr] Finished `dev` profile [unoptimized + debuginfo] target(s) in 41.42s [INFO] running `Command { std: "docker" "inspect" "c56296bb713b35c6fc1cb5db600d1b68f84049a5218d85d8a34e90529fd16262", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "c56296bb713b35c6fc1cb5db600d1b68f84049a5218d85d8a34e90529fd16262", kill_on_drop: false }` [INFO] [stdout] c56296bb713b35c6fc1cb5db600d1b68f84049a5218d85d8a34e90529fd16262 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-1-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-1-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:e90291280db7d1fac5b66fc6dad9f9662629e7365a55743daf9bdf73ebc4ea79" "/opt/rustwide/cargo-home/bin/cargo" "+caccb4d0368bd918ef6668af8e13834d07040417" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] 73cdbafad466751569bc99d48b8d8467f9ceefc8ec69a0fcb6b5dbfd8bf20fdb [INFO] running `Command { std: "docker" "start" "-a" "73cdbafad466751569bc99d48b8d8467f9ceefc8ec69a0fcb6b5dbfd8bf20fdb", kill_on_drop: false }` [INFO] [stderr] Compiling packbed v0.0.8 (/opt/rustwide/workdir) [INFO] [stderr] Finished `test` profile [unoptimized + debuginfo] target(s) in 2.98s [INFO] running `Command { std: "docker" "inspect" "73cdbafad466751569bc99d48b8d8467f9ceefc8ec69a0fcb6b5dbfd8bf20fdb", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "73cdbafad466751569bc99d48b8d8467f9ceefc8ec69a0fcb6b5dbfd8bf20fdb", kill_on_drop: false }` [INFO] [stdout] 73cdbafad466751569bc99d48b8d8467f9ceefc8ec69a0fcb6b5dbfd8bf20fdb [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-1-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-1-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:e90291280db7d1fac5b66fc6dad9f9662629e7365a55743daf9bdf73ebc4ea79" "/opt/rustwide/cargo-home/bin/cargo" "+caccb4d0368bd918ef6668af8e13834d07040417" "test" "--frozen", kill_on_drop: false }` [INFO] [stdout] 19eb72f299940419bbca0b07db62caf449f937cde902cd19288955539600687a [INFO] running `Command { std: "docker" "start" "-a" "19eb72f299940419bbca0b07db62caf449f937cde902cd19288955539600687a", kill_on_drop: false }` [INFO] [stderr] Finished `test` profile [unoptimized + debuginfo] target(s) in 0.12s [INFO] [stderr] Running unittests src/lib.rs (/opt/rustwide/target/debug/deps/packbed-ee46175cc1327364) [INFO] [stdout] [INFO] [stdout] running 10 tests [INFO] [stdout] test record::tests::test_bed12_abs_pos_minus ... ok [INFO] [stdout] test record::tests::test_bed12_get_coords_and_gapper_minus ... ok [INFO] [stdout] test record::tests::test_bed12_get_coords_and_gapper_minus_nested_utr ... ok [INFO] [stdout] test record::tests::test_bed12_get_coords_and_gapper_plus_nested_utr ... ok [INFO] [stdout] test record::tests::test_bed12_get_coords_and_gapper_plus ... ok [INFO] [stdout] test record::tests::test_bed12_abs_pos_plus ... ok [INFO] [stdout] test tests::test_exonic_overlap_true ... ok [INFO] [stdout] test tests::test_packbed_with_simple_bed ... ok [INFO] [stdout] test tests::test_packbed_with_simple_bed_gz ... ok [INFO] [stdout] test tests::test_exonic_overlap_false ... ok [INFO] [stdout] [INFO] [stdout] test result: ok. 10 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.05s [INFO] [stdout] [INFO] [stderr] Running unittests src/main.rs (/opt/rustwide/target/debug/deps/packbed-4468d2b72ae17ac1) [INFO] [stdout] [INFO] [stdout] running 0 tests [INFO] [stdout] [INFO] [stdout] test result: ok. 0 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.00s [INFO] [stdout] [INFO] [stderr] Doc-tests packbed [INFO] [stdout] [INFO] [stdout] running 0 tests [INFO] [stdout] [INFO] [stdout] test result: ok. 0 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.00s [INFO] [stdout] [INFO] running `Command { std: "docker" "inspect" "19eb72f299940419bbca0b07db62caf449f937cde902cd19288955539600687a", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "19eb72f299940419bbca0b07db62caf449f937cde902cd19288955539600687a", kill_on_drop: false }` [INFO] [stdout] 19eb72f299940419bbca0b07db62caf449f937cde902cd19288955539600687a