[INFO] fetching crate noodles-gff 0.52.0... [INFO] testing noodles-gff-0.52.0 against master#caccb4d0368bd918ef6668af8e13834d07040417 for pr-146098-1 [INFO] extracting crate noodles-gff 0.52.0 into /workspace/builds/worker-3-tc1/source [INFO] started tweaking crates.io crate noodles-gff 0.52.0 [INFO] removed 0 missing examples [INFO] finished tweaking crates.io crate noodles-gff 0.52.0 [INFO] tweaked toml for crates.io crate noodles-gff 0.52.0 written to /workspace/builds/worker-3-tc1/source/Cargo.toml [INFO] validating manifest of crates.io crate noodles-gff 0.52.0 on toolchain caccb4d0368bd918ef6668af8e13834d07040417 [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+caccb4d0368bd918ef6668af8e13834d07040417" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] crate crates.io crate noodles-gff 0.52.0 already has a lockfile, it will not be regenerated [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+caccb4d0368bd918ef6668af8e13834d07040417" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] Updating crates.io index [INFO] [stderr] Downloading crates ... [INFO] [stderr] Downloaded noodles-csi v0.51.0 [INFO] [stderr] Downloaded noodles-bgzf v0.43.0 [INFO] [stderr] Downloaded noodles-core v0.18.0 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:e90291280db7d1fac5b66fc6dad9f9662629e7365a55743daf9bdf73ebc4ea79" "/opt/rustwide/cargo-home/bin/cargo" "+caccb4d0368bd918ef6668af8e13834d07040417" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] 755544b0ae42f7414ad88e82e17044c8392f79c496cacefe948c8ee9a668f46d [INFO] running `Command { std: "docker" "start" "-a" "755544b0ae42f7414ad88e82e17044c8392f79c496cacefe948c8ee9a668f46d", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "755544b0ae42f7414ad88e82e17044c8392f79c496cacefe948c8ee9a668f46d", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "755544b0ae42f7414ad88e82e17044c8392f79c496cacefe948c8ee9a668f46d", kill_on_drop: false }` [INFO] [stdout] 755544b0ae42f7414ad88e82e17044c8392f79c496cacefe948c8ee9a668f46d [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:e90291280db7d1fac5b66fc6dad9f9662629e7365a55743daf9bdf73ebc4ea79" "/opt/rustwide/cargo-home/bin/cargo" "+caccb4d0368bd918ef6668af8e13834d07040417" "build" "--frozen" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] 73699f8d95a5c1f1cb26fc9e3cdc6301aacc86a324c735c7de7ac4ba9c5bdc71 [INFO] running `Command { std: "docker" "start" "-a" "73699f8d95a5c1f1cb26fc9e3cdc6301aacc86a324c735c7de7ac4ba9c5bdc71", kill_on_drop: false }` [INFO] [stderr] Compiling lexical-util v1.0.6 [INFO] [stderr] Compiling zlib-rs v0.5.1 [INFO] [stderr] Compiling memchr v2.7.5 [INFO] [stderr] Compiling hashbrown v0.15.5 [INFO] [stderr] Compiling bit-vec v0.8.0 [INFO] [stderr] Compiling lexical-parse-integer v1.0.5 [INFO] [stderr] Compiling lexical-write-integer v1.0.5 [INFO] [stderr] Compiling bstr v1.12.0 [INFO] [stderr] Compiling indexmap v2.11.0 [INFO] [stderr] Compiling lexical-parse-float v1.0.5 [INFO] [stderr] Compiling lexical-write-float v1.0.5 [INFO] [stderr] Compiling noodles-core v0.18.0 [INFO] [stderr] Compiling lexical-core v1.0.5 [INFO] [stderr] Compiling libz-rs-sys v0.5.1 [INFO] [stderr] Compiling flate2 v1.1.2 [INFO] [stderr] Compiling noodles-bgzf v0.43.0 [INFO] [stderr] Compiling noodles-csi v0.51.0 [INFO] [stderr] Compiling noodles-gff v0.52.0 (/opt/rustwide/workdir) [INFO] [stderr] Finished `dev` profile [unoptimized + debuginfo] target(s) in 4.06s [INFO] running `Command { std: "docker" "inspect" "73699f8d95a5c1f1cb26fc9e3cdc6301aacc86a324c735c7de7ac4ba9c5bdc71", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "73699f8d95a5c1f1cb26fc9e3cdc6301aacc86a324c735c7de7ac4ba9c5bdc71", kill_on_drop: false }` [INFO] [stdout] 73699f8d95a5c1f1cb26fc9e3cdc6301aacc86a324c735c7de7ac4ba9c5bdc71 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:e90291280db7d1fac5b66fc6dad9f9662629e7365a55743daf9bdf73ebc4ea79" "/opt/rustwide/cargo-home/bin/cargo" "+caccb4d0368bd918ef6668af8e13834d07040417" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] 08be6ec7f674cf47bbc2fe965efbb4b56d0ce2563e6af49bc67fbaf0813c9411 [INFO] running `Command { std: "docker" "start" "-a" "08be6ec7f674cf47bbc2fe965efbb4b56d0ce2563e6af49bc67fbaf0813c9411", kill_on_drop: false }` [INFO] [stderr] Compiling syn v2.0.106 [INFO] [stderr] Compiling tokio-macros v2.5.0 [INFO] [stderr] Compiling tokio v1.47.1 [INFO] [stderr] Compiling noodles-gff v0.52.0 (/opt/rustwide/workdir) [INFO] [stderr] Finished `test` profile [unoptimized + debuginfo] target(s) in 4.33s [INFO] running `Command { std: "docker" "inspect" "08be6ec7f674cf47bbc2fe965efbb4b56d0ce2563e6af49bc67fbaf0813c9411", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "08be6ec7f674cf47bbc2fe965efbb4b56d0ce2563e6af49bc67fbaf0813c9411", kill_on_drop: false }` [INFO] [stdout] 08be6ec7f674cf47bbc2fe965efbb4b56d0ce2563e6af49bc67fbaf0813c9411 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:e90291280db7d1fac5b66fc6dad9f9662629e7365a55743daf9bdf73ebc4ea79" "/opt/rustwide/cargo-home/bin/cargo" "+caccb4d0368bd918ef6668af8e13834d07040417" "test" "--frozen", kill_on_drop: false }` [INFO] [stdout] 04a5b89181d6fc5323ffa4f38e4fec491054f5ed13edf3bdcaee520f321bd0e7 [INFO] running `Command { std: "docker" "start" "-a" "04a5b89181d6fc5323ffa4f38e4fec491054f5ed13edf3bdcaee520f321bd0e7", kill_on_drop: false }` [INFO] [stderr] Finished `test` profile [unoptimized + debuginfo] target(s) in 0.03s [INFO] [stderr] Running unittests src/lib.rs (/opt/rustwide/target/debug/deps/noodles_gff-f79a23bad85cdfac) [INFO] [stdout] [INFO] [stdout] running 44 tests [INFO] [stdout] test directive::tests::test_value ... ok [INFO] [stdout] test directive::tests::test_key ... ok [INFO] [stdout] test directive_buf::value::genome_build::tests::test_from_str ... ok [INFO] [stdout] test directive_buf::value::genome_build::tests::test_fmt ... ok [INFO] [stdout] test directive_buf::value::gff_version::tests::test_fmt ... ok [INFO] [stdout] test directive_buf::value::gff_version::tests::test_from_str ... ok [INFO] [stdout] test directive_buf::value::sequence_region::tests::test_from_str ... ok [INFO] [stdout] test directive_buf::value::sequence_region::tests::test_fmt ... ok [INFO] [stdout] test feature::record::strand::tests::test_default ... ok [INFO] [stdout] test feature::record_buf::builder::tests::test_build ... ok [INFO] [stdout] test feature::record_buf::builder::tests::test_default ... ok [INFO] [stdout] test io::reader::tests::test_read_line ... ok [INFO] [stdout] test io::reader::line::tests::test_read_line ... ok [INFO] [stdout] test io::reader::tests::test_records ... ok [INFO] [stdout] test io::reader::tests::test_records_with_fasta_directive ... ok [INFO] [stdout] test io::writer::line::directive::tests::test_write_directive ... ok [INFO] [stdout] test io::writer::line::comment::tests::test_write_comment ... ok [INFO] [stdout] test io::writer::line::directive::value::genome_build::tests::test_write_genome_build ... ok [INFO] [stdout] test io::writer::line::directive::value::gff_version::tests::test_write_gff_version ... ok [INFO] [stdout] test io::writer::line::directive::value::sequence_region::tests::test_write_sequence_region ... ok [INFO] [stdout] test io::writer::line::record::attributes::field::tag::tests::test_write_tag ... ok [INFO] [stdout] test io::writer::line::record::attributes::field::tests::test_write_field ... ok [INFO] [stdout] test io::writer::line::record::attributes::field::value::tests::test_write_value ... ok [INFO] [stdout] test io::writer::line::record::attributes::tests::test_write_attributes ... ok [INFO] [stdout] test io::writer::line::record::phase::tests::test_write_phase ... ok [INFO] [stdout] test io::writer::line::record::position::tests::test_write_position ... ok [INFO] [stdout] test io::writer::line::record::reference_sequence_name::tests::test_write_reference_sequence_name ... ok [INFO] [stdout] test io::writer::line::record::score::tests::test_write_score ... ok [INFO] [stdout] test io::writer::line::record::source::tests::test_write_source ... ok [INFO] [stdout] test io::writer::line::record::strand::tests::test_write_strand ... ok [INFO] [stdout] test io::writer::line::record::tests::test_write_record ... ok [INFO] [stdout] test io::writer::line::record::ty::tests::test_write_type ... ok [INFO] [stdout] test io::writer::line::tests::test_write_line ... ok [INFO] [stdout] test record::attributes::field::tag::tests::test_parse_tag ... ok [INFO] [stdout] test record::attributes::field::tests::test_next ... ok [INFO] [stdout] test record::attributes::field::value::tests::test_is_array ... ok [INFO] [stdout] test record::attributes::field::value::tests::test_parse_value ... ok [INFO] [stdout] test record::attributes::field::value::array::tests::test_iter ... ok [INFO] [stdout] test record::attributes::tests::test_get ... ok [INFO] [stdout] test record::attributes::tests::test_is_empty ... ok [INFO] [stdout] test record::attributes::tests::test_iter ... ok [INFO] [stdout] test record::tests::test_parse_score ... ok [INFO] [stdout] test record::tests::test_parse_strand ... ok [INFO] [stdout] test record::tests::test_parse_phase ... ok [INFO] [stdout] [INFO] [stdout] test result: ok. 44 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.00s [INFO] [stdout] [INFO] [stderr] Doc-tests noodles_gff [INFO] [stdout] [INFO] [stdout] running 52 tests [INFO] [stdout] test src/directive_buf/value/gff_version.rs - directive_buf::value::gff_version::GffVersion::major (line 23) ... ok [INFO] [stdout] test src/directive_buf/value/gff_version.rs - directive_buf::value::gff_version::GffVersion::minor (line 37) ... ok [INFO] [stdout] test src/directive_buf/value/genome_build.rs - directive_buf::value::genome_build::GenomeBuild::name (line 51) ... ok [INFO] [stdout] test src/directive_buf/value/genome_build.rs - directive_buf::value::genome_build::GenomeBuild::new (line 19) ... ok [INFO] [stdout] test src/directive_buf/value/genome_build.rs - directive_buf::value::genome_build::GenomeBuild::source (line 38) ... ok [INFO] [stdout] test src/directive_buf/value/sequence_region.rs - directive_buf::value::sequence_region::SequenceRegion::end (line 84) ... ok [INFO] [stdout] test src/directive_buf/value/sequence_region.rs - directive_buf::value::sequence_region::SequenceRegion::new (line 21) ... ok [INFO] [stdout] test src/directive_buf/value/gff_version.rs - directive_buf::value::gff_version::GffVersion::patch (line 51) ... ok [INFO] [stdout] test src/directive_buf/value/sequence_region.rs - directive_buf::value::sequence_region::SequenceRegion::reference_sequence_name (line 44) ... ok [INFO] [stdout] test src/directive_buf/value/sequence_region.rs - directive_buf::value::sequence_region::SequenceRegion::start (line 64) ... ok [INFO] [stdout] test src/feature/record_buf.rs - feature::record_buf::RecordBuf::attributes (line 161) ... ok [INFO] [stdout] test src/feature/record_buf.rs - feature::record_buf::RecordBuf::reference_sequence_name (line 51) ... ok [INFO] [stdout] test src/feature/record_buf.rs - feature::record_buf::RecordBuf::builder (line 34) ... ok [INFO] [stdout] test src/feature/record_buf.rs - feature::record_buf::RecordBuf::end (line 108) ... ok [INFO] [stdout] test src/feature/record_buf.rs - feature::record_buf::RecordBuf::score (line 122) ... ok [INFO] [stdout] test src/feature/record_buf.rs - feature::record_buf::RecordBuf::strand (line 135) ... ok [INFO] [stdout] test src/feature/record_buf/attributes/field/value.rs - feature::record_buf::attributes::field::value::Value::as_array (line 42) ... ok [INFO] [stdout] test src/feature/record_buf.rs - feature::record_buf::RecordBuf::source (line 64) ... ok [INFO] [stdout] test src/feature/record_buf.rs - feature::record_buf::RecordBuf::start (line 92) ... ok [INFO] [stdout] test src/feature/record_buf.rs - feature::record_buf::RecordBuf::ty (line 77) ... ok [INFO] [stdout] test src/feature/record_buf/attributes/field/value.rs - feature::record_buf::attributes::field::value::Value::as_string (line 21) ... ok [INFO] [stdout] test src/feature/record_buf.rs - feature::record_buf::RecordBuf::phase (line 148) ... ok [INFO] [stdout] test src/feature/record_buf/attributes/field/value.rs - feature::record_buf::attributes::field::value::Value::iter (line 64) ... ok [INFO] [stdout] test src/feature/record_buf/builder.rs - feature::record_buf::builder::Builder::build (line 210) ... ok [INFO] [stdout] test src/feature/record_buf/builder.rs - feature::record_buf::builder::Builder::set_phase (line 168) ... ok [INFO] [stdout] test src/feature/record_buf/builder.rs - feature::record_buf::builder::Builder::set_end (line 120) ... ok [INFO] [stdout] test src/feature/record_buf/builder.rs - feature::record_buf::builder::Builder::set_attributes (line 182) ... ok [INFO] [stdout] test src/feature/record_buf/builder.rs - feature::record_buf::builder::Builder::new (line 29) ... ok [INFO] [stdout] test src/feature/record_buf/builder.rs - feature::record_buf::builder::Builder::set_reference_sequence_name (line 41) ... ok [INFO] [stdout] test src/feature/record_buf/builder.rs - feature::record_buf::builder::Builder::set_score (line 136) ... ok [INFO] [stdout] test src/io/reader.rs - io::reader::Reader>::query (line 197) - compile ... ok [INFO] [stdout] test src/feature/record_buf/builder.rs - feature::record_buf::builder::Builder::set_start (line 104) ... ok [INFO] [stdout] test src/feature/record_buf/builder.rs - feature::record_buf::builder::Builder::set_source (line 62) ... ok [INFO] [stdout] test src/feature/record_buf/builder.rs - feature::record_buf::builder::Builder::set_strand (line 150) ... ok [INFO] [stdout] test src/feature/record_buf/builder.rs - feature::record_buf::builder::Builder::set_type (line 83) ... ok [INFO] [stdout] test src/io/reader.rs - io::reader::Reader::get_mut (line 41) ... ok [INFO] [stdout] test src/io/reader.rs - io::reader::Reader::line_bufs (line 92) ... ok [INFO] [stdout] test src/io/reader.rs - io::reader::Reader::read_line (line 118) ... ok [INFO] [stdout] test src/io/reader.rs - io::reader::Reader::new (line 74) ... ok [INFO] [stdout] test src/io/reader.rs - io::reader::Reader::record_bufs (line 171) ... ok [INFO] [stdout] test src/io/reader.rs - io::reader::Reader::get_ref (line 27) ... ok [INFO] [stdout] test src/io/writer.rs - io::writer::Writer::get_mut (line 33) ... ok [INFO] [stdout] test src/io/reader.rs - io::reader::Reader::lines (line 143) ... ok [INFO] [stdout] test src/io/writer.rs - io::writer::Writer::write_feature_record (line 166) ... ok [INFO] [stdout] test src/io/reader.rs - io::reader::Reader::into_inner (line 55) ... ok [INFO] [stdout] test src/io/writer.rs - io::writer::Writer::get_ref (line 19) ... ok [INFO] [stdout] test src/lib.rs - (line 11) - compile ... ok [INFO] [stdout] test src/io/writer.rs - io::writer::Writer::write_line (line 78) ... ok [INFO] [stdout] test src/io/writer.rs - io::writer::Writer::write_directive (line 112) ... ok [INFO] [stdout] test src/io/writer.rs - io::writer::Writer::into_inner (line 47) ... ok [INFO] [stdout] test src/io/writer.rs - io::writer::Writer::new (line 66) ... ok [INFO] [stdout] test src/io/writer.rs - io::writer::Writer::write_record (line 136) ... ok [INFO] [stdout] [INFO] [stdout] test result: ok. 52 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.01s [INFO] [stdout] [INFO] running `Command { std: "docker" "inspect" "04a5b89181d6fc5323ffa4f38e4fec491054f5ed13edf3bdcaee520f321bd0e7", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "04a5b89181d6fc5323ffa4f38e4fec491054f5ed13edf3bdcaee520f321bd0e7", kill_on_drop: false }` [INFO] [stdout] 04a5b89181d6fc5323ffa4f38e4fec491054f5ed13edf3bdcaee520f321bd0e7