[INFO] cloning repository https://github.com/Adoni5/cnv_from_bam
[INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/Adoni5/cnv_from_bam" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2FAdoni5%2Fcnv_from_bam", kill_on_drop: false }`
[INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2FAdoni5%2Fcnv_from_bam'...
[INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }`
[INFO] [stdout] c537c911efb519f10579a1dab8612025edf0c1ad
[INFO] checking Adoni5/cnv_from_bam against master#9b81629631b382fd49ee3a20ac47797b1467e52d for pr-146095
[INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2FAdoni5%2Fcnv_from_bam" "/workspace/builds/worker-5-tc1/source", kill_on_drop: false }`
[INFO] [stderr] Cloning into '/workspace/builds/worker-5-tc1/source'...
[INFO] [stderr] done.
[INFO] started tweaking git repo https://github.com/Adoni5/cnv_from_bam
[INFO] finished tweaking git repo https://github.com/Adoni5/cnv_from_bam
[INFO] tweaked toml for git repo https://github.com/Adoni5/cnv_from_bam written to /workspace/builds/worker-5-tc1/source/Cargo.toml
[INFO] validating manifest of git repo https://github.com/Adoni5/cnv_from_bam on toolchain 9b81629631b382fd49ee3a20ac47797b1467e52d
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+9b81629631b382fd49ee3a20ac47797b1467e52d" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+9b81629631b382fd49ee3a20ac47797b1467e52d" "generate-lockfile" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] [stderr]     Updating crates.io index
[INFO] [stderr]      Locking 90 packages to latest Rust 1.94.0-nightly compatible versions
[INFO] [stderr]       Adding noodles v0.99.0 (available: v0.104.0)
[INFO] [stderr]       Adding noodles-bgzf v0.41.0 (available: v0.45.0)
[INFO] [stderr]       Adding pyo3 v0.25.1 (available: v0.27.2)
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+9b81629631b382fd49ee3a20ac47797b1467e52d" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] [stderr]  Downloading crates ...
[INFO] [stderr]   Downloaded natord v1.0.9
[INFO] [stderr]   Downloaded noodles-core v0.17.0
[INFO] [stderr]   Downloaded noodles v0.99.0
[INFO] [stderr]   Downloaded noodles-csi v0.49.0
[INFO] [stderr]   Downloaded libdeflater v1.25.0
[INFO] [stderr]   Downloaded noodles-bgzf v0.41.0
[INFO] [stderr]   Downloaded libdeflate-sys v1.25.0
[INFO] [stderr]   Downloaded noodles-bam v0.81.0
[INFO] [stderr]   Downloaded noodles-sam v0.77.0
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-5-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-5-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:aa71247004a7fa38d13ec170f48f06cdedf5bc50b2a8645e56ed7e992e6fa513" "/opt/rustwide/cargo-home/bin/cargo" "+9b81629631b382fd49ee3a20ac47797b1467e52d" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] [stdout] 736f9e5e1b3bba6cbfe8ff1f0a173fefccbd6afdb15efc08e30590588ae60ffd
[INFO] running `Command { std: "docker" "start" "-a" "736f9e5e1b3bba6cbfe8ff1f0a173fefccbd6afdb15efc08e30590588ae60ffd", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "736f9e5e1b3bba6cbfe8ff1f0a173fefccbd6afdb15efc08e30590588ae60ffd", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "736f9e5e1b3bba6cbfe8ff1f0a173fefccbd6afdb15efc08e30590588ae60ffd", kill_on_drop: false }`
[INFO] [stdout] 736f9e5e1b3bba6cbfe8ff1f0a173fefccbd6afdb15efc08e30590588ae60ffd
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-5-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-5-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:aa71247004a7fa38d13ec170f48f06cdedf5bc50b2a8645e56ed7e992e6fa513" "/opt/rustwide/cargo-home/bin/cargo" "+9b81629631b382fd49ee3a20ac47797b1467e52d" "check" "--frozen" "--all" "--all-targets" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] 5db370c0a0f6491c58df6f49b9248734cce7fe5a17a5dd0d06e8f996d29dc3cb
[INFO] running `Command { std: "docker" "start" "-a" "5db370c0a0f6491c58df6f49b9248734cce7fe5a17a5dd0d06e8f996d29dc3cb", kill_on_drop: false }`
[INFO] [stderr]    Compiling target-lexicon v0.13.4
[INFO] [stderr]     Checking lexical-util v1.0.7
[INFO] [stderr]     Checking regex-automata v0.4.13
[INFO] [stderr]     Checking zlib-rs v0.5.5
[INFO] [stderr]    Compiling libdeflate-sys v1.25.0
[INFO] [stderr]     Checking bit-vec v0.8.0
[INFO] [stderr]    Compiling quote v1.0.43
[INFO] [stderr]     Checking parking_lot_core v0.9.12
[INFO] [stderr]    Compiling nix v0.30.1
[INFO] [stderr]    Compiling portable-atomic v1.13.0
[INFO] [stderr]     Checking unindent v0.2.4
[INFO] [stderr]     Checking unit-prefix v0.5.2
[INFO] [stderr]     Checking natord v1.0.9
[INFO] [stderr]     Checking once_cell v1.21.3
[INFO] [stderr]    Compiling syn v2.0.114
[INFO] [stderr]     Checking console v0.16.2
[INFO] [stderr]     Checking lexical-parse-integer v1.0.6
[INFO] [stderr]     Checking lexical-write-integer v1.0.6
[INFO] [stderr]    Compiling pyo3-build-config v0.25.1
[INFO] [stderr]     Checking lexical-write-float v1.0.6
[INFO] [stderr]     Checking bstr v1.12.1
[INFO] [stderr]     Checking lexical-parse-float v1.0.6
[INFO] [stderr]     Checking ctrlc v3.5.1
[INFO] [stderr]     Checking indicatif v0.18.3
[INFO] [stderr]     Checking flate2 v1.1.8
[INFO] [stderr]     Checking lexical-core v1.0.6
[INFO] [stderr]     Checking noodles-core v0.17.0
[INFO] [stderr]    Compiling pyo3-macros-backend v0.25.1
[INFO] [stderr]    Compiling pyo3-ffi v0.25.1
[INFO] [stderr]    Compiling pyo3 v0.25.1
[INFO] [stderr]     Checking libdeflater v1.25.0
[INFO] [stderr]     Checking noodles-bgzf v0.41.0
[INFO] [stderr]     Checking noodles-csi v0.49.0
[INFO] [stderr]     Checking noodles-sam v0.77.0
[INFO] [stderr]     Checking noodles-bam v0.81.0
[INFO] [stderr]    Compiling pyo3-macros v0.25.1
[INFO] [stderr]     Checking noodles v0.99.0
[INFO] [stderr]     Checking cnv_from_bam v0.4.5 (/opt/rustwide/workdir)
[INFO] [stdout] warning: unused import: `PyList`
[INFO] [stdout]   --> src/lib.rs:71:27
[INFO] [stdout]    |
[INFO] [stdout] 71 | use pyo3::types::{PyDict, PyList};
[INFO] [stdout]    |                           ^^^^^^
[INFO] [stdout]    |
[INFO] [stdout]    = note: `#[warn(unused_imports)]` (part of `#[warn(unused)]`) on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unused import: `PyList`
[INFO] [stdout]   --> src/lib.rs:71:27
[INFO] [stdout]    |
[INFO] [stdout] 71 | use pyo3::types::{PyDict, PyList};
[INFO] [stdout]    |                           ^^^^^^
[INFO] [stdout]    |
[INFO] [stdout]    = note: `#[warn(unused_imports)]` (part of `#[warn(unused)]`) on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stderr]     Finished `dev` profile [unoptimized + debuginfo] target(s) in 16.52s
[INFO] running `Command { std: "docker" "inspect" "5db370c0a0f6491c58df6f49b9248734cce7fe5a17a5dd0d06e8f996d29dc3cb", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "5db370c0a0f6491c58df6f49b9248734cce7fe5a17a5dd0d06e8f996d29dc3cb", kill_on_drop: false }`
[INFO] [stdout] 5db370c0a0f6491c58df6f49b9248734cce7fe5a17a5dd0d06e8f996d29dc3cb
