[INFO] cloning repository https://github.com/AndreaGuarracino/lib_bpaf
[INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/AndreaGuarracino/lib_bpaf" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2FAndreaGuarracino%2Flib_bpaf", kill_on_drop: false }`
[INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2FAndreaGuarracino%2Flib_bpaf'...
[INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }`
[INFO] [stdout] b546fa0f79e3fe25be7494be1d63962e2b6e3d62
[INFO] checking AndreaGuarracino/lib_bpaf against master#9b81629631b382fd49ee3a20ac47797b1467e52d for pr-146095
[INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2FAndreaGuarracino%2Flib_bpaf" "/workspace/builds/worker-0-tc1/source", kill_on_drop: false }`
[INFO] [stderr] Cloning into '/workspace/builds/worker-0-tc1/source'...
[INFO] [stderr] done.
[INFO] started tweaking git repo https://github.com/AndreaGuarracino/lib_bpaf
[INFO] finished tweaking git repo https://github.com/AndreaGuarracino/lib_bpaf
[INFO] tweaked toml for git repo https://github.com/AndreaGuarracino/lib_bpaf written to /workspace/builds/worker-0-tc1/source/Cargo.toml
[INFO] validating manifest of git repo https://github.com/AndreaGuarracino/lib_bpaf on toolchain 9b81629631b382fd49ee3a20ac47797b1467e52d
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+9b81629631b382fd49ee3a20ac47797b1467e52d" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] crate git repo https://github.com/AndreaGuarracino/lib_bpaf already has a lockfile, it will not be regenerated
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+9b81629631b382fd49ee3a20ac47797b1467e52d" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] [stderr]     Updating crates.io index
[INFO] [stderr]     Updating git repository `https://github.com/AndreaGuarracino/lib_wfa2`
[INFO] [stderr]     Updating git submodule `https://github.com/smarco/WFA2-lib`
[INFO] [stderr]     Updating git repository `https://github.com/AndreaGuarracino/tracepoints`
[INFO] [stderr]  Downloading crates ...
[INFO] [stderr]   Downloaded noodles v0.100.0
[INFO] [stderr]   Downloaded bgzip v0.3.1
[INFO] [stderr]   Downloaded zlib-rs v0.5.4
[INFO] [stderr]   Downloaded libz-rs-sys v0.5.4
[INFO] [stderr]   Downloaded noodles-bgzf v0.42.0
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-0-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-0-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:aa71247004a7fa38d13ec170f48f06cdedf5bc50b2a8645e56ed7e992e6fa513" "/opt/rustwide/cargo-home/bin/cargo" "+9b81629631b382fd49ee3a20ac47797b1467e52d" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] [stdout] 9adc03f2b04ec692f8cebfbf42cfd27a21f92c3189d496f0c30539d748f03021
[INFO] running `Command { std: "docker" "start" "-a" "9adc03f2b04ec692f8cebfbf42cfd27a21f92c3189d496f0c30539d748f03021", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "9adc03f2b04ec692f8cebfbf42cfd27a21f92c3189d496f0c30539d748f03021", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "9adc03f2b04ec692f8cebfbf42cfd27a21f92c3189d496f0c30539d748f03021", kill_on_drop: false }`
[INFO] [stdout] 9adc03f2b04ec692f8cebfbf42cfd27a21f92c3189d496f0c30539d748f03021
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-0-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-0-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:aa71247004a7fa38d13ec170f48f06cdedf5bc50b2a8645e56ed7e992e6fa513" "/opt/rustwide/cargo-home/bin/cargo" "+9b81629631b382fd49ee3a20ac47797b1467e52d" "check" "--frozen" "--all" "--all-targets" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] 4187e4fb2c21e6fc56fe1876c6fe05dfa75a0909166c37f496057d941e96c955
[INFO] running `Command { std: "docker" "start" "-a" "4187e4fb2c21e6fc56fe1876c6fe05dfa75a0909166c37f496057d941e96c955", kill_on_drop: false }`
[INFO] [stderr]    Compiling libc v0.2.178
[INFO] [stderr]    Compiling find-msvc-tools v0.1.5
[INFO] [stderr]    Compiling quote v1.0.42
[INFO] [stderr]     Checking zlib-rs v0.5.4
[INFO] [stderr]     Checking simd-adler32 v0.3.8
[INFO] [stderr]     Checking aho-corasick v1.1.4
[INFO] [stderr]     Checking regex-syntax v0.8.8
[INFO] [stderr]    Compiling rayon-core v1.13.0
[INFO] [stderr]     Checking miniz_oxide v0.8.9
[INFO] [stderr]    Compiling zstd-safe v7.2.4
[INFO] [stderr]    Compiling lib_wfa2 v0.1.0 (https://github.com/AndreaGuarracino/lib_wfa2#ec37a250)
[INFO] [stderr]     Checking log v0.4.29
[INFO] [stderr]     Checking crossbeam-channel v0.5.15
[INFO] [stderr] error: failed to run custom build command for `lib_wfa2 v0.1.0 (https://github.com/AndreaGuarracino/lib_wfa2#ec37a250)`
[INFO] [stderr] note: To improve backtraces for build dependencies, set the CARGO_PROFILE_DEV_BUILD_OVERRIDE_DEBUG=true environment variable to enable debug information generation.
[INFO] [stderr] 
[INFO] [stderr] Caused by:
[INFO] [stderr]   process didn't exit successfully: `/opt/rustwide/target/debug/build/lib_wfa2-3b99c5cd7cf8bf66/build-script-build` (exit status: 101)
[INFO] [stderr]   --- stderr
[INFO] [stderr] 
[INFO] [stderr]   thread 'main' (211) panicked at /opt/rustwide/cargo-home/git/checkouts/lib_wfa2-9e554f8770e7b94e/ec37a25/build.rs:177:9:
[INFO] [stderr]   Failed to build WFA2-lib: Make failed:
[INFO] [stderr]   STDOUT:
[INFO] [stderr]   rm -rf bin build lib 2> /dev/null
[INFO] [stderr]   make --directory=tools/align_benchmark clean
[INFO] [stderr]   make[1]: Entering directory '/opt/rustwide/cargo-home/git/checkouts/lib_wfa2-9e554f8770e7b94e/ec37a25/WFA2-lib/tools/align_benchmark'
[INFO] [stderr]   rm -rf ./build
[INFO] [stderr]   make[1]: Leaving directory '/opt/rustwide/cargo-home/git/checkouts/lib_wfa2-9e554f8770e7b94e/ec37a25/WFA2-lib/tools/align_benchmark'
[INFO] [stderr]   make --directory=examples clean
[INFO] [stderr]   make[1]: Entering directory '/opt/rustwide/cargo-home/git/checkouts/lib_wfa2-9e554f8770e7b94e/ec37a25/WFA2-lib/examples'
[INFO] [stderr]   rm -rf bin
[INFO] [stderr]   make[1]: Leaving directory '/opt/rustwide/cargo-home/git/checkouts/lib_wfa2-9e554f8770e7b94e/ec37a25/WFA2-lib/examples'
[INFO] [stderr]   rm -rf tests/*.alg tests/*.log* 2> /dev/null
[INFO] [stderr] 
[INFO] [stderr]   STDERR:
[INFO] [stderr]   mkdir: cannot create directory 'bin': Read-only file system
[INFO] [stderr]   mkdir: cannot create directory 'build': Read-only file system
[INFO] [stderr]   mkdir: cannot create directory 'build': Read-only file system
[INFO] [stderr]   mkdir: cannot create directory 'lib': Read-only file system
[INFO] [stderr]   make: *** [Makefile:70: setup] Error 1
[INFO] [stderr] 
[INFO] [stderr]   stack backtrace:
[INFO] [stderr]      0:     0x5d59af4c9e62 - std[2ade4c2364de62da]::backtrace_rs::backtrace::libunwind::trace
[INFO] [stderr]                                  at /rustc/9b81629631b382fd49ee3a20ac47797b1467e52d/library/std/src/../../backtrace/src/backtrace/libunwind.rs:117:9
[INFO] [stderr]      1:     0x5d59af4c9e62 - std[2ade4c2364de62da]::backtrace_rs::backtrace::trace_unsynchronized::<std[2ade4c2364de62da]::sys::backtrace::_print_fmt::{closure#1}>
[INFO] [stderr]                                  at /rustc/9b81629631b382fd49ee3a20ac47797b1467e52d/library/std/src/../../backtrace/src/backtrace/mod.rs:66:14
[INFO] [stderr]      2:     0x5d59af4c9e62 - std[2ade4c2364de62da]::sys::backtrace::_print_fmt
[INFO] [stderr]                                  at /rustc/9b81629631b382fd49ee3a20ac47797b1467e52d/library/std/src/sys/backtrace.rs:74:9
[INFO] [stderr]      3:     0x5d59af4c9e62 - <<std[2ade4c2364de62da]::sys::backtrace::BacktraceLock>::print::DisplayBacktrace as core[70014f3701156057]::fmt::Display>::fmt
[INFO] [stderr]                                  at /rustc/9b81629631b382fd49ee3a20ac47797b1467e52d/library/std/src/sys/backtrace.rs:44:26
[INFO] [stderr]      4:     0x5d59af4dbe8a - <core[70014f3701156057]::fmt::rt::Argument>::fmt
[INFO] [stderr]                                  at /rustc/9b81629631b382fd49ee3a20ac47797b1467e52d/library/core/src/fmt/rt.rs:152:76
[INFO] [stderr]      5:     0x5d59af4dbe8a - core[70014f3701156057]::fmt::write
[INFO] [stderr]      6:     0x5d59af4ce756 - std[2ade4c2364de62da]::io::default_write_fmt::<std[2ade4c2364de62da]::sys::stdio::unix::Stderr>
[INFO] [stderr]                                  at /rustc/9b81629631b382fd49ee3a20ac47797b1467e52d/library/std/src/io/mod.rs:639:11
[INFO] [stderr]      7:     0x5d59af4ce756 - <std[2ade4c2364de62da]::sys::stdio::unix::Stderr as std[2ade4c2364de62da]::io::Write>::write_fmt
[INFO] [stderr]                                  at /rustc/9b81629631b382fd49ee3a20ac47797b1467e52d/library/std/src/io/mod.rs:1994:13
[INFO] [stderr]      8:     0x5d59af4ad6ef - <std[2ade4c2364de62da]::sys::backtrace::BacktraceLock>::print
[INFO] [stderr]                                  at /rustc/9b81629631b382fd49ee3a20ac47797b1467e52d/library/std/src/sys/backtrace.rs:47:9
[INFO] [stderr]      9:     0x5d59af4ad6ef - std[2ade4c2364de62da]::panicking::default_hook::{closure#0}
[INFO] [stderr]                                  at /rustc/9b81629631b382fd49ee3a20ac47797b1467e52d/library/std/src/panicking.rs:292:27
[INFO] [stderr]     10:     0x5d59af4c5961 - std[2ade4c2364de62da]::panicking::default_hook
[INFO] [stderr]                                  at /rustc/9b81629631b382fd49ee3a20ac47797b1467e52d/library/std/src/panicking.rs:319:9
[INFO] [stderr]     11:     0x5d59af4c5b1b - std[2ade4c2364de62da]::panicking::panic_with_hook
[INFO] [stderr]                                  at /rustc/9b81629631b382fd49ee3a20ac47797b1467e52d/library/std/src/panicking.rs:825:13
[INFO] [stderr]     12:     0x5d59af4ad7a8 - std[2ade4c2364de62da]::panicking::panic_handler::{closure#0}
[INFO] [stderr]                                  at /rustc/9b81629631b382fd49ee3a20ac47797b1467e52d/library/std/src/panicking.rs:698:13
[INFO] [stderr]     13:     0x5d59af4a2919 - std[2ade4c2364de62da]::sys::backtrace::__rust_end_short_backtrace::<std[2ade4c2364de62da]::panicking::panic_handler::{closure#0}, !>
[INFO] [stderr]                                  at /rustc/9b81629631b382fd49ee3a20ac47797b1467e52d/library/std/src/sys/backtrace.rs:182:18
[INFO] [stderr]     14:     0x5d59af4ae0ed - __rustc[2d9923b8307f5353]::rust_begin_unwind
[INFO] [stderr]                                  at /rustc/9b81629631b382fd49ee3a20ac47797b1467e52d/library/std/src/panicking.rs:689:5
[INFO] [stderr]     15:     0x5d59af4dc4fc - core[70014f3701156057]::panicking::panic_fmt
[INFO] [stderr]                                  at /rustc/9b81629631b382fd49ee3a20ac47797b1467e52d/library/core/src/panicking.rs:80:14
[INFO] [stderr]     16:     0x5d59af48d469 - build_script_build[b027cb982dc095c5]::main
[INFO] [stderr]     17:     0x5d59af490223 - <fn() as core[70014f3701156057]::ops::function::FnOnce<()>>::call_once
[INFO] [stderr]     18:     0x5d59af48c146 - std[2ade4c2364de62da]::sys::backtrace::__rust_begin_short_backtrace::<fn(), ()>
[INFO] [stderr]     19:     0x5d59af4916c9 - std[2ade4c2364de62da]::rt::lang_start::<()>::{closure#0}
[INFO] [stderr]     20:     0x5d59af4c4b16 - <&dyn core[70014f3701156057]::ops::function::Fn<(), Output = i32> + core[70014f3701156057]::panic::unwind_safe::RefUnwindSafe + core[70014f3701156057]::marker::Sync as core[70014f3701156057]::ops::function::FnOnce<()>>::call_once
[INFO] [stderr]                                  at /rustc/9b81629631b382fd49ee3a20ac47797b1467e52d/library/core/src/ops/function.rs:287:21
[INFO] [stderr]     21:     0x5d59af4c4b16 - std[2ade4c2364de62da]::panicking::catch_unwind::do_call::<&dyn core[70014f3701156057]::ops::function::Fn<(), Output = i32> + core[70014f3701156057]::panic::unwind_safe::RefUnwindSafe + core[70014f3701156057]::marker::Sync, i32>
[INFO] [stderr]                                  at /rustc/9b81629631b382fd49ee3a20ac47797b1467e52d/library/std/src/panicking.rs:581:40
[INFO] [stderr]     22:     0x5d59af4c4b16 - std[2ade4c2364de62da]::panicking::catch_unwind::<i32, &dyn core[70014f3701156057]::ops::function::Fn<(), Output = i32> + core[70014f3701156057]::panic::unwind_safe::RefUnwindSafe + core[70014f3701156057]::marker::Sync>
[INFO] [stderr]                                  at /rustc/9b81629631b382fd49ee3a20ac47797b1467e52d/library/std/src/panicking.rs:544:19
[INFO] [stderr]     23:     0x5d59af4c4b16 - std[2ade4c2364de62da]::panic::catch_unwind::<&dyn core[70014f3701156057]::ops::function::Fn<(), Output = i32> + core[70014f3701156057]::panic::unwind_safe::RefUnwindSafe + core[70014f3701156057]::marker::Sync, i32>
[INFO] [stderr]                                  at /rustc/9b81629631b382fd49ee3a20ac47797b1467e52d/library/std/src/panic.rs:359:14
[INFO] [stderr]     24:     0x5d59af4c4b16 - std[2ade4c2364de62da]::rt::lang_start_internal::{closure#0}
[INFO] [stderr]                                  at /rustc/9b81629631b382fd49ee3a20ac47797b1467e52d/library/std/src/rt.rs:175:24
[INFO] [stderr]     25:     0x5d59af4c4b16 - std[2ade4c2364de62da]::panicking::catch_unwind::do_call::<std[2ade4c2364de62da]::rt::lang_start_internal::{closure#0}, isize>
[INFO] [stderr]                                  at /rustc/9b81629631b382fd49ee3a20ac47797b1467e52d/library/std/src/panicking.rs:581:40
[INFO] [stderr]     26:     0x5d59af4c4b16 - std[2ade4c2364de62da]::panicking::catch_unwind::<isize, std[2ade4c2364de62da]::rt::lang_start_internal::{closure#0}>
[INFO] [stderr]                                  at /rustc/9b81629631b382fd49ee3a20ac47797b1467e52d/library/std/src/panicking.rs:544:19
[INFO] [stderr]     27:     0x5d59af4c4b16 - std[2ade4c2364de62da]::panic::catch_unwind::<std[2ade4c2364de62da]::rt::lang_start_internal::{closure#0}, isize>
[INFO] [stderr]                                  at /rustc/9b81629631b382fd49ee3a20ac47797b1467e52d/library/std/src/panic.rs:359:14
[INFO] [stderr]     28:     0x5d59af4c4b16 - std[2ade4c2364de62da]::rt::lang_start_internal
[INFO] [stderr]                                  at /rustc/9b81629631b382fd49ee3a20ac47797b1467e52d/library/std/src/rt.rs:171:5
[INFO] [stderr]     29:     0x5d59af491211 - std[2ade4c2364de62da]::rt::lang_start::<()>
[INFO] [stderr]     30:     0x5d59af490415 - main
[INFO] [stderr]     31:     0x7dd7d2b241ca - <unknown>
[INFO] [stderr]     32:     0x7dd7d2b2428b - __libc_start_main
[INFO] [stderr]     33:     0x5d59af48b505 - _start
[INFO] [stderr]     34:                0x0 - <unknown>
[INFO] [stderr] warning: build failed, waiting for other jobs to finish...
[INFO] running `Command { std: "docker" "inspect" "4187e4fb2c21e6fc56fe1876c6fe05dfa75a0909166c37f496057d941e96c955", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "4187e4fb2c21e6fc56fe1876c6fe05dfa75a0909166c37f496057d941e96c955", kill_on_drop: false }`
[INFO] [stdout] 4187e4fb2c21e6fc56fe1876c6fe05dfa75a0909166c37f496057d941e96c955
