[INFO] fetching crate omics-variation 0.2.0... [INFO] testing omics-variation-0.2.0 against try#b83b707f97d809763b7861afa7638871f3339a33 for pr-145838-1 [INFO] extracting crate omics-variation 0.2.0 into /workspace/builds/worker-7-tc2/source [INFO] started tweaking crates.io crate omics-variation 0.2.0 [INFO] removed 0 missing examples [INFO] finished tweaking crates.io crate omics-variation 0.2.0 [INFO] tweaked toml for crates.io crate omics-variation 0.2.0 written to /workspace/builds/worker-7-tc2/source/Cargo.toml [INFO] validating manifest of crates.io crate omics-variation 0.2.0 on toolchain b83b707f97d809763b7861afa7638871f3339a33 [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+b83b707f97d809763b7861afa7638871f3339a33" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] crate crates.io crate omics-variation 0.2.0 already has a lockfile, it will not be regenerated [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+b83b707f97d809763b7861afa7638871f3339a33" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-7-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-7-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:7ad1b28ee6f5f7f699f6cf7015098d6ccdd96d6f2d78dd06228f5b4c9faf309c" "/opt/rustwide/cargo-home/bin/cargo" "+b83b707f97d809763b7861afa7638871f3339a33" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] 28993f556bb90756ad9aca9e5f82f0970067ecd4e9aadbcc5d944a3956997276 [INFO] running `Command { std: "docker" "start" "-a" "28993f556bb90756ad9aca9e5f82f0970067ecd4e9aadbcc5d944a3956997276", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "28993f556bb90756ad9aca9e5f82f0970067ecd4e9aadbcc5d944a3956997276", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "28993f556bb90756ad9aca9e5f82f0970067ecd4e9aadbcc5d944a3956997276", kill_on_drop: false }` [INFO] [stdout] 28993f556bb90756ad9aca9e5f82f0970067ecd4e9aadbcc5d944a3956997276 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-7-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-7-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:7ad1b28ee6f5f7f699f6cf7015098d6ccdd96d6f2d78dd06228f5b4c9faf309c" "/opt/rustwide/cargo-home/bin/cargo" "+b83b707f97d809763b7861afa7638871f3339a33" "build" "--frozen" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] a3846a68868dcb46b96e909b584f5ff7dc775b309abca95259fec8125ad96b07 [INFO] running `Command { std: "docker" "start" "-a" "a3846a68868dcb46b96e909b584f5ff7dc775b309abca95259fec8125ad96b07", kill_on_drop: false }` [INFO] [stderr] Compiling omics-core v0.1.0 [INFO] [stderr] Compiling syn v2.0.93 [INFO] [stderr] Compiling omics-molecule v0.1.0 [INFO] [stderr] Compiling thiserror-impl v2.0.9 [INFO] [stderr] Compiling thiserror v2.0.9 [INFO] [stderr] Compiling omics-coordinate v0.2.0 [INFO] [stderr] Compiling omics-variation v0.2.0 (/opt/rustwide/workdir) [INFO] [stderr] Finished `dev` profile [unoptimized + debuginfo] target(s) in 4.11s [INFO] running `Command { std: "docker" "inspect" "a3846a68868dcb46b96e909b584f5ff7dc775b309abca95259fec8125ad96b07", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "a3846a68868dcb46b96e909b584f5ff7dc775b309abca95259fec8125ad96b07", kill_on_drop: false }` [INFO] [stdout] a3846a68868dcb46b96e909b584f5ff7dc775b309abca95259fec8125ad96b07 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-7-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-7-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:7ad1b28ee6f5f7f699f6cf7015098d6ccdd96d6f2d78dd06228f5b4c9faf309c" "/opt/rustwide/cargo-home/bin/cargo" "+b83b707f97d809763b7861afa7638871f3339a33" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] 06fe26f53a0c8db97ff138f8d86a7349ccf9683159b89dd4b6f39b9271cbb5d5 [INFO] running `Command { std: "docker" "start" "-a" "06fe26f53a0c8db97ff138f8d86a7349ccf9683159b89dd4b6f39b9271cbb5d5", kill_on_drop: false }` [INFO] [stderr] Compiling anyhow v1.0.94 [INFO] [stderr] Compiling omics-variation v0.2.0 (/opt/rustwide/workdir) [INFO] [stderr] Finished `test` profile [unoptimized + debuginfo] target(s) in 1.32s [INFO] running `Command { std: "docker" "inspect" "06fe26f53a0c8db97ff138f8d86a7349ccf9683159b89dd4b6f39b9271cbb5d5", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "06fe26f53a0c8db97ff138f8d86a7349ccf9683159b89dd4b6f39b9271cbb5d5", kill_on_drop: false }` [INFO] [stdout] 06fe26f53a0c8db97ff138f8d86a7349ccf9683159b89dd4b6f39b9271cbb5d5 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-7-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-7-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:7ad1b28ee6f5f7f699f6cf7015098d6ccdd96d6f2d78dd06228f5b4c9faf309c" "/opt/rustwide/cargo-home/bin/cargo" "+b83b707f97d809763b7861afa7638871f3339a33" "test" "--frozen", kill_on_drop: false }` [INFO] [stdout] fc6f4c2301665b6a8e180870ecc3e293f286925fdebcfe5efce4a0249fe2586f [INFO] running `Command { std: "docker" "start" "-a" "fc6f4c2301665b6a8e180870ecc3e293f286925fdebcfe5efce4a0249fe2586f", kill_on_drop: false }` [INFO] [stderr] Finished `test` profile [unoptimized + debuginfo] target(s) in 0.05s [INFO] [stderr] Running unittests src/lib.rs (/opt/rustwide/target/debug/deps/omics_variation-7a393c8533b2b568) [INFO] [stdout] [INFO] [stdout] running 13 tests [INFO] [stdout] test snv::tests::it_creates_a_variant_on_the_negative_strand_in_a_dna_context ... ok [INFO] [stdout] test snv::tests::it_creates_a_variant_in_a_dna_context ... ok [INFO] [stdout] test snv::tests::it_creates_a_variant_on_the_negative_strand_in_a_rna_context ... ok [INFO] [stdout] test snv::tests::it_fails_when_attempting_to_represent_a_deletion ... ok [INFO] [stdout] test snv::tests::it_fails_when_attempting_to_represent_an_empty_pair ... ok [INFO] [stdout] test snv::tests::it_fails_when_attempting_to_represent_an_insertion ... ok [INFO] [stdout] test tests::it_parses_dna_snvs_correctly ... ok [INFO] [stdout] test tests::it_serializes_correctly ... ok [INFO] [stdout] test snv::tests::it_fails_when_creating_a_variant_with_identical_nucleotides ... ok [INFO] [stdout] test tests::it_errors_when_attempting_to_parse_invalid_variants ... ok [INFO] [stdout] test snv::tests::it_creates_a_variant_in_a_rna_context ... ok [INFO] [stdout] test snv::tests::it_creates_a_variant_with_no_specified_strand_in_a_rna_context ... ok [INFO] [stdout] test snv::tests::it_creates_a_variant_with_no_specified_strand_in_a_dna_context ... ok [INFO] [stdout] [INFO] [stdout] test result: ok. 13 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.00s [INFO] [stdout] [INFO] [stderr] Doc-tests omics_variation [INFO] [stdout] [INFO] [stdout] running 4 tests [INFO] [stdout] test src/snv.rs - snv::Variant::reference (line 176) ... ok [INFO] [stdout] test src/snv.rs - snv::Variant::alternate (line 198) ... ok [INFO] [stdout] test src/snv.rs - snv::Variant::coordinate (line 149) ... ok [INFO] [stdout] test src/snv.rs - snv::Variant::try_new (line 109) ... ok [INFO] [stdout] [INFO] [stdout] test result: ok. 4 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.56s [INFO] [stdout] [INFO] running `Command { std: "docker" "inspect" "fc6f4c2301665b6a8e180870ecc3e293f286925fdebcfe5efce4a0249fe2586f", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "fc6f4c2301665b6a8e180870ecc3e293f286925fdebcfe5efce4a0249fe2586f", kill_on_drop: false }` [INFO] [stdout] fc6f4c2301665b6a8e180870ecc3e293f286925fdebcfe5efce4a0249fe2586f