[INFO] fetching crate krakenuniq-rs 0.0.4... [INFO] testing krakenuniq-rs-0.0.4 against try#b83b707f97d809763b7861afa7638871f3339a33 for pr-145838-1 [INFO] extracting crate krakenuniq-rs 0.0.4 into /workspace/builds/worker-3-tc2/source [INFO] started tweaking crates.io crate krakenuniq-rs 0.0.4 [INFO] finished tweaking crates.io crate krakenuniq-rs 0.0.4 [INFO] tweaked toml for crates.io crate krakenuniq-rs 0.0.4 written to /workspace/builds/worker-3-tc2/source/Cargo.toml [INFO] validating manifest of crates.io crate krakenuniq-rs 0.0.4 on toolchain b83b707f97d809763b7861afa7638871f3339a33 [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+b83b707f97d809763b7861afa7638871f3339a33" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] crate crates.io crate krakenuniq-rs 0.0.4 already has a lockfile, it will not be regenerated [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+b83b707f97d809763b7861afa7638871f3339a33" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:7ad1b28ee6f5f7f699f6cf7015098d6ccdd96d6f2d78dd06228f5b4c9faf309c" "/opt/rustwide/cargo-home/bin/cargo" "+b83b707f97d809763b7861afa7638871f3339a33" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] b4b6827a0847040defa669000ba13d816f3f1c5750de2b4a2e2482ad3285b989 [INFO] running `Command { std: "docker" "start" "-a" "b4b6827a0847040defa669000ba13d816f3f1c5750de2b4a2e2482ad3285b989", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "b4b6827a0847040defa669000ba13d816f3f1c5750de2b4a2e2482ad3285b989", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "b4b6827a0847040defa669000ba13d816f3f1c5750de2b4a2e2482ad3285b989", kill_on_drop: false }` [INFO] [stdout] b4b6827a0847040defa669000ba13d816f3f1c5750de2b4a2e2482ad3285b989 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:7ad1b28ee6f5f7f699f6cf7015098d6ccdd96d6f2d78dd06228f5b4c9faf309c" "/opt/rustwide/cargo-home/bin/cargo" "+b83b707f97d809763b7861afa7638871f3339a33" "build" "--frozen" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] daab08e3dc3ba5f8f7102cee004b19621be1c66cdd115a122a040fc6020fab6f [INFO] running `Command { std: "docker" "start" "-a" "daab08e3dc3ba5f8f7102cee004b19621be1c66cdd115a122a040fc6020fab6f", kill_on_drop: false }` [INFO] [stderr] Compiling syn v1.0.109 [INFO] [stderr] Compiling rustversion v1.0.19 [INFO] [stderr] Compiling portable-atomic v1.10.0 [INFO] [stderr] Compiling libc v0.2.169 [INFO] [stderr] Compiling quote v1.0.38 [INFO] [stderr] Compiling adler2 v2.0.0 [INFO] [stderr] Compiling thiserror v2.0.9 [INFO] [stderr] Compiling unicode-width v0.2.0 [INFO] [stderr] Compiling ahash v0.8.11 [INFO] [stderr] Compiling crc32fast v1.4.2 [INFO] [stderr] Compiling env_filter v0.1.3 [INFO] [stderr] Compiling maplit v1.0.2 [INFO] [stderr] Compiling number_prefix v0.4.0 [INFO] [stderr] Compiling colored v2.2.0 [INFO] [stderr] Compiling rayon v1.10.0 [INFO] [stderr] Compiling miniz_oxide v0.8.2 [INFO] [stderr] Compiling syn v2.0.93 [INFO] [stderr] Compiling env_logger v0.11.6 [INFO] [stderr] Compiling flate2 v1.0.35 [INFO] [stderr] Compiling getrandom v0.2.15 [INFO] [stderr] Compiling parking_lot_core v0.9.10 [INFO] [stderr] Compiling console v0.15.10 [INFO] [stderr] Compiling indicatif v0.17.9 [INFO] [stderr] Compiling parking_lot v0.12.3 [INFO] [stderr] Compiling thiserror-impl v2.0.9 [INFO] [stderr] Compiling strum_macros v0.24.3 [INFO] [stderr] Compiling strum v0.24.1 [INFO] [stderr] Compiling spinners v4.1.1 [INFO] [stderr] Compiling krakenuniq-rs v0.0.4 (/opt/rustwide/workdir) [INFO] [stdout] warning: unused import: `std::collections::BTreeMap` [INFO] [stdout] --> src/krakendb.rs:3:5 [INFO] [stdout] | [INFO] [stdout] 3 | use std::collections::BTreeMap; [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_imports)]` (part of `#[warn(unused)]`) on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused imports: `BufRead` and `BufReader` [INFO] [stdout] --> src/krakendb.rs:5:15 [INFO] [stdout] | [INFO] [stdout] 5 | use std::io::{BufRead, BufReader, Error as IoError, ErrorKind, Read, Seek, SeekFrom}; [INFO] [stdout] | ^^^^^^^ ^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused imports: `ErrorKind` and `Error` [INFO] [stdout] --> src/taxdb.rs:5:35 [INFO] [stdout] | [INFO] [stdout] 5 | use std::io::{BufRead, BufReader, Error, ErrorKind}; [INFO] [stdout] | ^^^^^ ^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `ahash::AHashMap` [INFO] [stdout] --> src/lib.rs:9:5 [INFO] [stdout] | [INFO] [stdout] 9 | use ahash::AHashMap; [INFO] [stdout] | ^^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `old_base` [INFO] [stdout] --> src/classify/classify_sequence.rs:41:29 [INFO] [stdout] | [INFO] [stdout] 41 | fn roll_kmer_2bit(old: u64, old_base: u8, new_base: u8, k: usize) -> (u64, bool) { [INFO] [stdout] | ^^^^^^^^ help: if this is intentional, prefix it with an underscore: `_old_base` [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_variables)]` (part of `#[warn(unused)]`) on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: variable does not need to be mutable [INFO] [stdout] --> src/classify/classify_sequence.rs:262:14 [INFO] [stdout] | [INFO] [stdout] 262 | let (mut encoded, valid) = encode_first_kmer(window); [INFO] [stdout] | ----^^^^^^^ [INFO] [stdout] | | [INFO] [stdout] | help: remove this `mut` [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_mut)]` (part of `#[warn(unused)]`) on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `t0` [INFO] [stdout] --> src/lib.rs:141:9 [INFO] [stdout] | [INFO] [stdout] 141 | let t0 = Instant::now(); [INFO] [stdout] | ^^ help: if this is intentional, prefix it with an underscore: `_t0` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `t1` [INFO] [stdout] --> src/lib.rs:147:9 [INFO] [stdout] | [INFO] [stdout] 147 | let t1 = Instant::now(); [INFO] [stdout] | ^^ help: if this is intentional, prefix it with an underscore: `_t1` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: function `roll_kmer_2bit` is never used [INFO] [stdout] --> src/classify/classify_sequence.rs:41:4 [INFO] [stdout] | [INFO] [stdout] 41 | fn roll_kmer_2bit(old: u64, old_base: u8, new_base: u8, k: usize) -> (u64, bool) { [INFO] [stdout] | ^^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(dead_code)]` (part of `#[warn(unused)]`) on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stderr] Finished `dev` profile [unoptimized + debuginfo] target(s) in 14.16s [INFO] running `Command { std: "docker" "inspect" "daab08e3dc3ba5f8f7102cee004b19621be1c66cdd115a122a040fc6020fab6f", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "daab08e3dc3ba5f8f7102cee004b19621be1c66cdd115a122a040fc6020fab6f", kill_on_drop: false }` [INFO] [stdout] daab08e3dc3ba5f8f7102cee004b19621be1c66cdd115a122a040fc6020fab6f [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:7ad1b28ee6f5f7f699f6cf7015098d6ccdd96d6f2d78dd06228f5b4c9faf309c" "/opt/rustwide/cargo-home/bin/cargo" "+b83b707f97d809763b7861afa7638871f3339a33" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] 6de5211d207ec12db07545efb0c07d6cc15132ac76a7aa682ba83c49f5b8afc4 [INFO] running `Command { std: "docker" "start" "-a" "6de5211d207ec12db07545efb0c07d6cc15132ac76a7aa682ba83c49f5b8afc4", kill_on_drop: false }` [INFO] [stdout] warning: unused import: `std::collections::BTreeMap` [INFO] [stdout] --> src/krakendb.rs:3:5 [INFO] [stdout] | [INFO] [stdout] 3 | use std::collections::BTreeMap; [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_imports)]` (part of `#[warn(unused)]`) on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused imports: `BufRead` and `BufReader` [INFO] [stdout] --> src/krakendb.rs:5:15 [INFO] [stdout] | [INFO] [stdout] 5 | use std::io::{BufRead, BufReader, Error as IoError, ErrorKind, Read, Seek, SeekFrom}; [INFO] [stdout] | ^^^^^^^ ^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused imports: `ErrorKind` and `Error` [INFO] [stdout] --> src/taxdb.rs:5:35 [INFO] [stdout] | [INFO] [stdout] 5 | use std::io::{BufRead, BufReader, Error, ErrorKind}; [INFO] [stdout] | ^^^^^ ^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `ahash::AHashMap` [INFO] [stdout] --> src/lib.rs:9:5 [INFO] [stdout] | [INFO] [stdout] 9 | use ahash::AHashMap; [INFO] [stdout] | ^^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `old_base` [INFO] [stdout] --> src/classify/classify_sequence.rs:41:29 [INFO] [stdout] | [INFO] [stdout] 41 | fn roll_kmer_2bit(old: u64, old_base: u8, new_base: u8, k: usize) -> (u64, bool) { [INFO] [stdout] | ^^^^^^^^ help: if this is intentional, prefix it with an underscore: `_old_base` [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_variables)]` (part of `#[warn(unused)]`) on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: variable does not need to be mutable [INFO] [stdout] --> src/classify/classify_sequence.rs:262:14 [INFO] [stdout] | [INFO] [stdout] 262 | let (mut encoded, valid) = encode_first_kmer(window); [INFO] [stdout] | ----^^^^^^^ [INFO] [stdout] | | [INFO] [stdout] | help: remove this `mut` [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_mut)]` (part of `#[warn(unused)]`) on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `t0` [INFO] [stdout] --> src/lib.rs:141:9 [INFO] [stdout] | [INFO] [stdout] 141 | let t0 = Instant::now(); [INFO] [stdout] | ^^ help: if this is intentional, prefix it with an underscore: `_t0` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `t1` [INFO] [stdout] --> src/lib.rs:147:9 [INFO] [stdout] | [INFO] [stdout] 147 | let t1 = Instant::now(); [INFO] [stdout] | ^^ help: if this is intentional, prefix it with an underscore: `_t1` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: function `roll_kmer_2bit` is never used [INFO] [stdout] --> src/classify/classify_sequence.rs:41:4 [INFO] [stdout] | [INFO] [stdout] 41 | fn roll_kmer_2bit(old: u64, old_base: u8, new_base: u8, k: usize) -> (u64, bool) { [INFO] [stdout] | ^^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(dead_code)]` (part of `#[warn(unused)]`) on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stderr] Compiling krakenuniq-rs v0.0.4 (/opt/rustwide/workdir) [INFO] [stdout] warning: unused import: `std::collections::BTreeMap` [INFO] [stdout] --> src/krakendb.rs:3:5 [INFO] [stdout] | [INFO] [stdout] 3 | use std::collections::BTreeMap; [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_imports)]` (part of `#[warn(unused)]`) on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused imports: `BufRead` and `BufReader` [INFO] [stdout] --> src/krakendb.rs:5:15 [INFO] [stdout] | [INFO] [stdout] 5 | use std::io::{BufRead, BufReader, Error as IoError, ErrorKind, Read, Seek, SeekFrom}; [INFO] [stdout] | ^^^^^^^ ^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused imports: `ErrorKind` and `Error` [INFO] [stdout] --> src/taxdb.rs:5:35 [INFO] [stdout] | [INFO] [stdout] 5 | use std::io::{BufRead, BufReader, Error, ErrorKind}; [INFO] [stdout] | ^^^^^ ^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `ahash::AHashMap` [INFO] [stdout] --> src/lib.rs:9:5 [INFO] [stdout] | [INFO] [stdout] 9 | use ahash::AHashMap; [INFO] [stdout] | ^^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `old_base` [INFO] [stdout] --> src/classify/classify_sequence.rs:41:29 [INFO] [stdout] | [INFO] [stdout] 41 | fn roll_kmer_2bit(old: u64, old_base: u8, new_base: u8, k: usize) -> (u64, bool) { [INFO] [stdout] | ^^^^^^^^ help: if this is intentional, prefix it with an underscore: `_old_base` [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_variables)]` (part of `#[warn(unused)]`) on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: variable does not need to be mutable [INFO] [stdout] --> src/classify/classify_sequence.rs:262:14 [INFO] [stdout] | [INFO] [stdout] 262 | let (mut encoded, valid) = encode_first_kmer(window); [INFO] [stdout] | ----^^^^^^^ [INFO] [stdout] | | [INFO] [stdout] | help: remove this `mut` [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_mut)]` (part of `#[warn(unused)]`) on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `t0` [INFO] [stdout] --> src/lib.rs:141:9 [INFO] [stdout] | [INFO] [stdout] 141 | let t0 = Instant::now(); [INFO] [stdout] | ^^ help: if this is intentional, prefix it with an underscore: `_t0` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `t1` [INFO] [stdout] --> src/lib.rs:147:9 [INFO] [stdout] | [INFO] [stdout] 147 | let t1 = Instant::now(); [INFO] [stdout] | ^^ help: if this is intentional, prefix it with an underscore: `_t1` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: function `roll_kmer_2bit` is never used [INFO] [stdout] --> src/classify/classify_sequence.rs:41:4 [INFO] [stdout] | [INFO] [stdout] 41 | fn roll_kmer_2bit(old: u64, old_base: u8, new_base: u8, k: usize) -> (u64, bool) { [INFO] [stdout] | ^^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(dead_code)]` (part of `#[warn(unused)]`) on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stderr] Finished `test` profile [unoptimized + debuginfo] target(s) in 1.70s [INFO] running `Command { std: "docker" "inspect" "6de5211d207ec12db07545efb0c07d6cc15132ac76a7aa682ba83c49f5b8afc4", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "6de5211d207ec12db07545efb0c07d6cc15132ac76a7aa682ba83c49f5b8afc4", kill_on_drop: false }` [INFO] [stdout] 6de5211d207ec12db07545efb0c07d6cc15132ac76a7aa682ba83c49f5b8afc4 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:7ad1b28ee6f5f7f699f6cf7015098d6ccdd96d6f2d78dd06228f5b4c9faf309c" "/opt/rustwide/cargo-home/bin/cargo" "+b83b707f97d809763b7861afa7638871f3339a33" "test" "--frozen", kill_on_drop: false }` [INFO] [stdout] 177c5f03d69e3d67297bcdd3a5ed49f3ff6b5123bfeabca99f70c4a9c387521d [INFO] running `Command { std: "docker" "start" "-a" "177c5f03d69e3d67297bcdd3a5ed49f3ff6b5123bfeabca99f70c4a9c387521d", kill_on_drop: false }` [INFO] [stderr] warning: unused import: `std::collections::BTreeMap` [INFO] [stderr] --> src/krakendb.rs:3:5 [INFO] [stderr] | [INFO] [stderr] 3 | use std::collections::BTreeMap; [INFO] [stderr] | ^^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stderr] | [INFO] [stderr] = note: `#[warn(unused_imports)]` (part of `#[warn(unused)]`) on by default [INFO] [stderr] [INFO] [stderr] warning: unused imports: `BufRead` and `BufReader` [INFO] [stderr] --> src/krakendb.rs:5:15 [INFO] [stderr] | [INFO] [stderr] 5 | use std::io::{BufRead, BufReader, Error as IoError, ErrorKind, Read, Seek, SeekFrom}; [INFO] [stderr] | ^^^^^^^ ^^^^^^^^^ [INFO] [stderr] [INFO] [stderr] warning: unused imports: `ErrorKind` and `Error` [INFO] [stderr] --> src/taxdb.rs:5:35 [INFO] [stderr] | [INFO] [stderr] 5 | use std::io::{BufRead, BufReader, Error, ErrorKind}; [INFO] [stderr] | ^^^^^ ^^^^^^^^^ [INFO] [stderr] [INFO] [stderr] warning: unused import: `ahash::AHashMap` [INFO] [stderr] --> src/lib.rs:9:5 [INFO] [stderr] | [INFO] [stderr] 9 | use ahash::AHashMap; [INFO] [stderr] | ^^^^^^^^^^^^^^^ [INFO] [stderr] [INFO] [stderr] warning: unused variable: `old_base` [INFO] [stderr] --> src/classify/classify_sequence.rs:41:29 [INFO] [stderr] | [INFO] [stderr] 41 | fn roll_kmer_2bit(old: u64, old_base: u8, new_base: u8, k: usize) -> (u64, bool) { [INFO] [stderr] | ^^^^^^^^ help: if this is intentional, prefix it with an underscore: `_old_base` [INFO] [stderr] | [INFO] [stderr] = note: `#[warn(unused_variables)]` (part of `#[warn(unused)]`) on by default [INFO] [stderr] [INFO] [stderr] warning: variable does not need to be mutable [INFO] [stderr] --> src/classify/classify_sequence.rs:262:14 [INFO] [stderr] | [INFO] [stderr] 262 | let (mut encoded, valid) = encode_first_kmer(window); [INFO] [stderr] | ----^^^^^^^ [INFO] [stderr] | | [INFO] [stderr] | help: remove this `mut` [INFO] [stderr] | [INFO] [stderr] = note: `#[warn(unused_mut)]` (part of `#[warn(unused)]`) on by default [INFO] [stderr] [INFO] [stderr] warning: unused variable: `t0` [INFO] [stderr] --> src/lib.rs:141:9 [INFO] [stderr] | [INFO] [stderr] 141 | let t0 = Instant::now(); [INFO] [stderr] | ^^ help: if this is intentional, prefix it with an underscore: `_t0` [INFO] [stderr] [INFO] [stderr] warning: unused variable: `t1` [INFO] [stderr] --> src/lib.rs:147:9 [INFO] [stderr] | [INFO] [stderr] 147 | let t1 = Instant::now(); [INFO] [stderr] | ^^ help: if this is intentional, prefix it with an underscore: `_t1` [INFO] [stderr] [INFO] [stderr] warning: function `roll_kmer_2bit` is never used [INFO] [stderr] --> src/classify/classify_sequence.rs:41:4 [INFO] [stderr] | [INFO] [stderr] 41 | fn roll_kmer_2bit(old: u64, old_base: u8, new_base: u8, k: usize) -> (u64, bool) { [INFO] [stderr] | ^^^^^^^^^^^^^^ [INFO] [stderr] | [INFO] [stderr] = note: `#[warn(dead_code)]` (part of `#[warn(unused)]`) on by default [INFO] [stderr] [INFO] [stderr] warning: `krakenuniq-rs` (lib) generated 9 warnings (run `cargo fix --lib -p krakenuniq-rs` to apply 5 suggestions) [INFO] [stderr] warning: `krakenuniq-rs` (lib test) generated 9 warnings (9 duplicates) [INFO] [stderr] Finished `test` profile [unoptimized + debuginfo] target(s) in 0.12s [INFO] [stderr] Running unittests src/lib.rs (/opt/rustwide/target/debug/deps/krakenuniq_rs-87d84e4c32da158e) [INFO] [stdout] [INFO] [stdout] running 1 test [INFO] [stdout] test tests::test_classify_reads_api ... FAILED [INFO] [stdout] [INFO] [stdout] failures: [INFO] [stdout] [INFO] [stdout] ---- tests::test_classify_reads_api stdout ---- [INFO] [stdout] [INFO] [stdout] thread 'tests::test_classify_reads_api' (26) panicked at src/lib.rs:222:14: [INFO] [stdout] Cannot read directory 'barcode03': Os { code: 2, kind: NotFound, message: "No such file or directory" } [INFO] [stdout] stack backtrace: [INFO] [stdout] 0: 0x646049267c82 - std::backtrace_rs::backtrace::libunwind::trace::h589a96ef7638b383 [INFO] [stdout] at /rustc/b83b707f97d809763b7861afa7638871f3339a33/library/std/src/../../backtrace/src/backtrace/libunwind.rs:117:9 [INFO] [stdout] 1: 0x646049267c82 - std::backtrace_rs::backtrace::trace_unsynchronized::h23a30a7548c40de4 [INFO] [stdout] at /rustc/b83b707f97d809763b7861afa7638871f3339a33/library/std/src/../../backtrace/src/backtrace/mod.rs:66:14 [INFO] [stdout] 2: 0x646049267c82 - std::sys::backtrace::_print_fmt::h87dabd6535c8c07a [INFO] [stdout] at /rustc/b83b707f97d809763b7861afa7638871f3339a33/library/std/src/sys/backtrace.rs:66:9 [INFO] [stdout] 3: 0x646049267c82 - ::fmt::hffd20ad4e5eca8ab [INFO] [stdout] at /rustc/b83b707f97d809763b7861afa7638871f3339a33/library/std/src/sys/backtrace.rs:39:26 [INFO] [stdout] 4: 0x646049279a5f - core::fmt::rt::Argument::fmt::h75c83e3fd5ce2419 [INFO] [stdout] at /rustc/b83b707f97d809763b7861afa7638871f3339a33/library/core/src/fmt/rt.rs:173:76 [INFO] [stdout] 5: 0x646049279a5f - core::fmt::write::h6d9d3a7cfd7b84f5 [INFO] [stdout] at /rustc/b83b707f97d809763b7861afa7638871f3339a33/library/core/src/fmt/mod.rs:1468:25 [INFO] [stdout] 6: 0x646049234a73 - std::io::default_write_fmt::he11a713685e2464d [INFO] [stdout] at /rustc/b83b707f97d809763b7861afa7638871f3339a33/library/std/src/io/mod.rs:639:11 [INFO] [stdout] 7: 0x646049234a73 - std::io::Write::write_fmt::h9d08f7e050bd2612 [INFO] [stdout] at /rustc/b83b707f97d809763b7861afa7638871f3339a33/library/std/src/io/mod.rs:1954:13 [INFO] [stdout] 8: 0x646049240b92 - std::sys::backtrace::BacktraceLock::print::hb28797143397220e [INFO] [stdout] at /rustc/b83b707f97d809763b7861afa7638871f3339a33/library/std/src/sys/backtrace.rs:42:9 [INFO] [stdout] 9: 0x64604924588f - std::panicking::default_hook::{{closure}}::h7555113b62983743 [INFO] [stdout] at /rustc/b83b707f97d809763b7861afa7638871f3339a33/library/std/src/panicking.rs:301:27 [INFO] [stdout] 10: 0x646049245721 - std::panicking::default_hook::h2714b564abe8d914 [INFO] [stdout] at /rustc/b83b707f97d809763b7861afa7638871f3339a33/library/std/src/panicking.rs:325:9 [INFO] [stdout] 11: 0x6460491bf8de - as core::ops::function::Fn>::call::h0e9de8cceb22406e [INFO] [stdout] at /rustc/b83b707f97d809763b7861afa7638871f3339a33/library/alloc/src/boxed.rs:1999:9 [INFO] [stdout] 12: 0x6460491bf8de - test::test_main_with_exit_callback::{{closure}}::h8125bd66cf4739d0 [INFO] [stdout] at /rustc/b83b707f97d809763b7861afa7638871f3339a33/library/test/src/lib.rs:145:21 [INFO] [stdout] 13: 0x646049245fde - as core::ops::function::Fn>::call::h1fd0a0802eaec16b [INFO] [stdout] at /rustc/b83b707f97d809763b7861afa7638871f3339a33/library/alloc/src/boxed.rs:1999:9 [INFO] [stdout] 14: 0x646049245fde - std::panicking::panic_with_hook::h190dc82263685ec5 [INFO] [stdout] at /rustc/b83b707f97d809763b7861afa7638871f3339a33/library/std/src/panicking.rs:842:13 [INFO] [stdout] 15: 0x646049245cfa - std::panicking::panic_handler::{{closure}}::h8b036a1b366643ac [INFO] [stdout] at /rustc/b83b707f97d809763b7861afa7638871f3339a33/library/std/src/panicking.rs:707:13 [INFO] [stdout] 16: 0x646049240cc9 - std::sys::backtrace::__rust_end_short_backtrace::h45affcfc0c830da8 [INFO] [stdout] at /rustc/b83b707f97d809763b7861afa7638871f3339a33/library/std/src/sys/backtrace.rs:174:18 [INFO] [stdout] 17: 0x64604922801d - __rustc[9b67c8562bba447b]::rust_begin_unwind [INFO] [stdout] at /rustc/b83b707f97d809763b7861afa7638871f3339a33/library/std/src/panicking.rs:698:5 [INFO] [stdout] 18: 0x6460492819b0 - core::panicking::panic_fmt::hc084f85b1e76c16d [INFO] [stdout] at /rustc/b83b707f97d809763b7861afa7638871f3339a33/library/core/src/panicking.rs:75:14 [INFO] [stdout] 19: 0x646049280be6 - core::result::unwrap_failed::hf926a4254073b4aa [INFO] [stdout] at /rustc/b83b707f97d809763b7861afa7638871f3339a33/library/core/src/result.rs:1852:5 [INFO] [stdout] 20: 0x646049154668 - core::result::Result::expect::hfd5144960e69defc [INFO] [stdout] at /rustc/b83b707f97d809763b7861afa7638871f3339a33/library/core/src/result.rs:1175:23 [INFO] [stdout] 21: 0x6460491899a8 - krakenuniq_rs::tests::test_classify_reads_api::h2c8891135609a30f [INFO] [stdout] at /opt/rustwide/workdir/src/lib.rs:222:14 [INFO] [stdout] 22: 0x64604918a447 - krakenuniq_rs::tests::test_classify_reads_api::{{closure}}::hac002c82322b92a3 [INFO] [stdout] at /opt/rustwide/workdir/src/lib.rs:219:33 [INFO] [stdout] 23: 0x64604917c9a6 - core::ops::function::FnOnce::call_once::h00ce03f15111ed02 [INFO] [stdout] at /rustc/b83b707f97d809763b7861afa7638871f3339a33/library/core/src/ops/function.rs:253:5 [INFO] [stdout] 24: 0x6460491bf69b - core::ops::function::FnOnce::call_once::hdbf42be2a49fb464 [INFO] [stdout] at /rustc/b83b707f97d809763b7861afa7638871f3339a33/library/core/src/ops/function.rs:253:5 [INFO] [stdout] 25: 0x6460491bf69b - test::__rust_begin_short_backtrace::h8ae08814d38cb356 [INFO] [stdout] at /rustc/b83b707f97d809763b7861afa7638871f3339a33/library/test/src/lib.rs:663:18 [INFO] [stdout] 26: 0x6460491d5185 - test::run_test_in_process::{{closure}}::h54574ee4f414d690 [INFO] [stdout] at /rustc/b83b707f97d809763b7861afa7638871f3339a33/library/test/src/lib.rs:686:74 [INFO] [stdout] 27: 0x6460491d5185 - as core::ops::function::FnOnce<()>>::call_once::h01a0b7e7aad1a501 [INFO] [stdout] at /rustc/b83b707f97d809763b7861afa7638871f3339a33/library/core/src/panic/unwind_safe.rs:272:9 [INFO] [stdout] 28: 0x6460491d5185 - std::panicking::catch_unwind::do_call::h23820e817c5612cd [INFO] [stdout] at /rustc/b83b707f97d809763b7861afa7638871f3339a33/library/std/src/panicking.rs:590:40 [INFO] [stdout] 29: 0x6460491d5185 - std::panicking::catch_unwind::h89c73a1febce5587 [INFO] [stdout] at /rustc/b83b707f97d809763b7861afa7638871f3339a33/library/std/src/panicking.rs:553:19 [INFO] [stdout] 30: 0x6460491d5185 - std::panic::catch_unwind::h6f55caf410861914 [INFO] [stdout] at /rustc/b83b707f97d809763b7861afa7638871f3339a33/library/std/src/panic.rs:359:14 [INFO] [stdout] 31: 0x6460491d5185 - test::run_test_in_process::h4db851878e5d3983 [INFO] [stdout] at /rustc/b83b707f97d809763b7861afa7638871f3339a33/library/test/src/lib.rs:686:27 [INFO] [stdout] 32: 0x6460491d5185 - test::run_test::{{closure}}::h57e8c5acaceacd24 [INFO] [stdout] at /rustc/b83b707f97d809763b7861afa7638871f3339a33/library/test/src/lib.rs:607:43 [INFO] [stdout] 33: 0x6460491abb74 - test::run_test::{{closure}}::he775ccc3a9d3b97e [INFO] [stdout] at /rustc/b83b707f97d809763b7861afa7638871f3339a33/library/test/src/lib.rs:637:41 [INFO] [stdout] 34: 0x6460491abb74 - std::sys::backtrace::__rust_begin_short_backtrace::hcd94d85d7765225a [INFO] [stdout] at /rustc/b83b707f97d809763b7861afa7638871f3339a33/library/std/src/sys/backtrace.rs:158:18 [INFO] [stdout] 35: 0x6460491af3ba - std::thread::Builder::spawn_unchecked_::{{closure}}::{{closure}}::ha814de8393f07830 [INFO] [stdout] at /rustc/b83b707f97d809763b7861afa7638871f3339a33/library/std/src/thread/mod.rs:559:17 [INFO] [stdout] 36: 0x6460491af3ba - as core::ops::function::FnOnce<()>>::call_once::h8deb00af0abdeaf1 [INFO] [stdout] at /rustc/b83b707f97d809763b7861afa7638871f3339a33/library/core/src/panic/unwind_safe.rs:272:9 [INFO] [stdout] 37: 0x6460491af3ba - std::panicking::catch_unwind::do_call::h1917979b0c279ea2 [INFO] [stdout] at /rustc/b83b707f97d809763b7861afa7638871f3339a33/library/std/src/panicking.rs:590:40 [INFO] [stdout] 38: 0x6460491af3ba - std::panicking::catch_unwind::h791ad91fee6ce34e [INFO] [stdout] at /rustc/b83b707f97d809763b7861afa7638871f3339a33/library/std/src/panicking.rs:553:19 [INFO] [stdout] 39: 0x6460491af3ba - std::panic::catch_unwind::h982b8f40ed9c3cce [INFO] [stdout] at /rustc/b83b707f97d809763b7861afa7638871f3339a33/library/std/src/panic.rs:359:14 [INFO] [stdout] 40: 0x6460491af3ba - std::thread::Builder::spawn_unchecked_::{{closure}}::h545e54700c945db4 [INFO] [stdout] at /rustc/b83b707f97d809763b7861afa7638871f3339a33/library/std/src/thread/mod.rs:557:30 [INFO] [stdout] 41: 0x6460491af3ba - core::ops::function::FnOnce::call_once{{vtable.shim}}::hb427481a5227d78a [INFO] [stdout] at /rustc/b83b707f97d809763b7861afa7638871f3339a33/library/core/src/ops/function.rs:253:5 [INFO] [stdout] 42: 0x64604923addf - as core::ops::function::FnOnce>::call_once::h1d452951a81e9d0a [INFO] [stdout] at /rustc/b83b707f97d809763b7861afa7638871f3339a33/library/alloc/src/boxed.rs:1985:9 [INFO] [stdout] 43: 0x64604923addf - std::sys::pal::unix::thread::Thread::new::thread_start::h29c84e109630689a [INFO] [stdout] at /rustc/b83b707f97d809763b7861afa7638871f3339a33/library/std/src/sys/pal/unix/thread.rs:118:17 [INFO] [stdout] 44: 0x769eb0e75aa4 - [INFO] [stdout] 45: 0x769eb0f02a34 - clone [INFO] [stdout] 46: 0x0 - [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] failures: [INFO] [stdout] tests::test_classify_reads_api [INFO] [stdout] [INFO] [stdout] test result: FAILED. 0 passed; 1 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.05s [INFO] [stdout] [INFO] [stderr] error: test failed, to rerun pass `--lib` [INFO] running `Command { std: "docker" "inspect" "177c5f03d69e3d67297bcdd3a5ed49f3ff6b5123bfeabca99f70c4a9c387521d", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "177c5f03d69e3d67297bcdd3a5ed49f3ff6b5123bfeabca99f70c4a9c387521d", kill_on_drop: false }` [INFO] [stdout] 177c5f03d69e3d67297bcdd3a5ed49f3ff6b5123bfeabca99f70c4a9c387521d