[INFO] fetching crate deepbiop-core 0.1.15...
[INFO] testing deepbiop-core-0.1.15 against try#b83b707f97d809763b7861afa7638871f3339a33 for pr-145838-1
[INFO] extracting crate deepbiop-core 0.1.15 into /workspace/builds/worker-0-tc2/source
[INFO] started tweaking crates.io crate deepbiop-core 0.1.15
[INFO] finished tweaking crates.io crate deepbiop-core 0.1.15
[INFO] tweaked toml for crates.io crate deepbiop-core 0.1.15 written to /workspace/builds/worker-0-tc2/source/Cargo.toml
[INFO] validating manifest of crates.io crate deepbiop-core 0.1.15 on toolchain b83b707f97d809763b7861afa7638871f3339a33
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+b83b707f97d809763b7861afa7638871f3339a33" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] crate crates.io crate deepbiop-core 0.1.15 already has a lockfile, it will not be regenerated
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+b83b707f97d809763b7861afa7638871f3339a33" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-0-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-0-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:7ad1b28ee6f5f7f699f6cf7015098d6ccdd96d6f2d78dd06228f5b4c9faf309c" "/opt/rustwide/cargo-home/bin/cargo" "+b83b707f97d809763b7861afa7638871f3339a33" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] [stdout] ff72f02a1f49ca90d7758adee246b6752b50914a3945c0a559212ccec1caa535
[INFO] running `Command { std: "docker" "start" "-a" "ff72f02a1f49ca90d7758adee246b6752b50914a3945c0a559212ccec1caa535", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "ff72f02a1f49ca90d7758adee246b6752b50914a3945c0a559212ccec1caa535", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "ff72f02a1f49ca90d7758adee246b6752b50914a3945c0a559212ccec1caa535", kill_on_drop: false }`
[INFO] [stdout] ff72f02a1f49ca90d7758adee246b6752b50914a3945c0a559212ccec1caa535
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-0-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-0-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:7ad1b28ee6f5f7f699f6cf7015098d6ccdd96d6f2d78dd06228f5b4c9faf309c" "/opt/rustwide/cargo-home/bin/cargo" "+b83b707f97d809763b7861afa7638871f3339a33" "build" "--frozen" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] 407fe3c7f91f5a4a86591de277b8cf82ee42b0ffeaa46167c2f3cd511cba016b
[INFO] running `Command { std: "docker" "start" "-a" "407fe3c7f91f5a4a86591de277b8cf82ee42b0ffeaa46167c2f3cd511cba016b", kill_on_drop: false }`
[INFO] [stderr]    Compiling proc-macro2 v1.0.93
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[INFO] [stderr]    Compiling deepbiop-core v0.1.15 (/opt/rustwide/workdir)
[INFO] [stderr]     Finished `dev` profile [unoptimized + debuginfo] target(s) in 1m 23s
[INFO] running `Command { std: "docker" "inspect" "407fe3c7f91f5a4a86591de277b8cf82ee42b0ffeaa46167c2f3cd511cba016b", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "407fe3c7f91f5a4a86591de277b8cf82ee42b0ffeaa46167c2f3cd511cba016b", kill_on_drop: false }`
[INFO] [stdout] 407fe3c7f91f5a4a86591de277b8cf82ee42b0ffeaa46167c2f3cd511cba016b
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-0-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-0-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:7ad1b28ee6f5f7f699f6cf7015098d6ccdd96d6f2d78dd06228f5b4c9faf309c" "/opt/rustwide/cargo-home/bin/cargo" "+b83b707f97d809763b7861afa7638871f3339a33" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] 4a9070fb121ab35b265b1fb8de7122140fa2ccbabdc1d34cb7fc254a7bb565ca
[INFO] running `Command { std: "docker" "start" "-a" "4a9070fb121ab35b265b1fb8de7122140fa2ccbabdc1d34cb7fc254a7bb565ca", kill_on_drop: false }`
[INFO] [stderr]    Compiling regex-automata v0.4.9
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[INFO] [stderr]    Compiling noodles v0.87.0
[INFO] [stderr]    Compiling deepbiop-core v0.1.15 (/opt/rustwide/workdir)
[INFO] [stderr]    Compiling nalgebra v0.32.6
[INFO] [stderr]    Compiling statrs v0.17.1
[INFO] [stderr]    Compiling bio v2.0.3
[INFO] [stderr]     Finished `test` profile [unoptimized + debuginfo] target(s) in 32.44s
[INFO] running `Command { std: "docker" "inspect" "4a9070fb121ab35b265b1fb8de7122140fa2ccbabdc1d34cb7fc254a7bb565ca", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "4a9070fb121ab35b265b1fb8de7122140fa2ccbabdc1d34cb7fc254a7bb565ca", kill_on_drop: false }`
[INFO] [stdout] 4a9070fb121ab35b265b1fb8de7122140fa2ccbabdc1d34cb7fc254a7bb565ca
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-0-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-0-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:7ad1b28ee6f5f7f699f6cf7015098d6ccdd96d6f2d78dd06228f5b4c9faf309c" "/opt/rustwide/cargo-home/bin/cargo" "+b83b707f97d809763b7861afa7638871f3339a33" "test" "--frozen", kill_on_drop: false }`
[INFO] [stdout] 24852205db927bf3eec05fa51d1329ac6c0debbf12d09f6ca2d8d61eb969e547
[INFO] running `Command { std: "docker" "start" "-a" "24852205db927bf3eec05fa51d1329ac6c0debbf12d09f6ca2d8d61eb969e547", kill_on_drop: false }`
[INFO] [stderr]     Finished `test` profile [unoptimized + debuginfo] target(s) in 0.24s
[INFO] [stderr]      Running unittests src/lib.rs (/opt/rustwide/target/debug/deps/deepbiop_core-94ae3a11421065e5)
[INFO] [stdout] 
[INFO] [stdout] running 12 tests
[INFO] [stdout] test kmer::tests::test_generate_kmers ... ok
[INFO] [stdout] test kmer::tests::test_to_original_target_region ... ok
[INFO] [stdout] test kmer::tests::test_update_target_region_invalid_end_greater_than_seq_len ... ok
[INFO] [stdout] test kmer::tests::test_update_target_region ... ok
[INFO] [stdout] test kmer::tests::test_update_target_region_invalid_start_greater_than_end ... ok
[INFO] [stdout] test kmer::tests::test_update_target_region_valid ... ok
[INFO] [stdout] test kmer::tests::test_generate_kmers_table_empty_base ... ok
[INFO] [stdout] test kmer::tests::test_seq_to_kmers ... ok
[INFO] [stdout] test kmer::tests::test_generate_kmers_table ... ok
[INFO] [stdout] test kmer::tests::test_seq_to_kmers_and_offset_non_overlap ... ok
[INFO] [stdout] test kmer::tests::test_seq_to_kmers_and_offset_overlap ... ok
[INFO] [stdout] test kmer::tests::test_construct_seq_from_kmers ... ok
[INFO] [stdout] 
[INFO] [stdout] test result: ok. 12 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.00s
[INFO] [stdout] 
[INFO] [stderr]    Doc-tests deepbiop_core
[INFO] [stdout] 
[INFO] [stdout] running 8 tests
[INFO] [stdout] test src/kmer.rs - kmer::generate_kmers_table (line 340) ... ok
[INFO] [stdout] test src/kmer.rs - kmer::to_kmer_target_region (line 108) ... ok
[INFO] [stdout] test src/kmer.rs - kmer::generate_kmers (line 372) ... ok
[INFO] [stdout] test src/kmer.rs - kmer::to_original_target_region (line 61) ... ok
[INFO] [stdout] test src/seq.rs - seq::reverse_complement (line 40) ... ok
[INFO] [stdout] test src/kmer.rs - kmer::seq_to_kmers_and_offset (line 275) ... ok
[INFO] [stdout] test src/kmer.rs - kmer::seq_to_kmers (line 171) ... ok
[INFO] [stdout] test src/kmer.rs - kmer::kmers_to_seq (line 210) ... ok
[INFO] [stdout] 
[INFO] [stdout] test result: ok. 8 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 1.43s
[INFO] [stdout] 
[INFO] running `Command { std: "docker" "inspect" "24852205db927bf3eec05fa51d1329ac6c0debbf12d09f6ca2d8d61eb969e547", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "24852205db927bf3eec05fa51d1329ac6c0debbf12d09f6ca2d8d61eb969e547", kill_on_drop: false }`
[INFO] [stdout] 24852205db927bf3eec05fa51d1329ac6c0debbf12d09f6ca2d8d61eb969e547