[INFO] fetching crate biodiff-align 1.2.1-preview... [INFO] testing biodiff-align-1.2.1-preview against try#b83b707f97d809763b7861afa7638871f3339a33 for pr-145838-1 [INFO] extracting crate biodiff-align 1.2.1-preview into /workspace/builds/worker-5-tc2/source [INFO] started tweaking crates.io crate biodiff-align 1.2.1-preview [INFO] finished tweaking crates.io crate biodiff-align 1.2.1-preview [INFO] tweaked toml for crates.io crate biodiff-align 1.2.1-preview written to /workspace/builds/worker-5-tc2/source/Cargo.toml [INFO] validating manifest of crates.io crate biodiff-align 1.2.1-preview on toolchain b83b707f97d809763b7861afa7638871f3339a33 [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+b83b707f97d809763b7861afa7638871f3339a33" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+b83b707f97d809763b7861afa7638871f3339a33" "generate-lockfile" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] Updating crates.io index [INFO] [stderr] Locking 89 packages to latest compatible versions [INFO] [stderr] Adding bio v1.6.0 (available: v2.3.0) [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+b83b707f97d809763b7861afa7638871f3339a33" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-5-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-5-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:7ad1b28ee6f5f7f699f6cf7015098d6ccdd96d6f2d78dd06228f5b4c9faf309c" "/opt/rustwide/cargo-home/bin/cargo" "+b83b707f97d809763b7861afa7638871f3339a33" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] 3081e5cfe7abd7995db426e25b9c2c0980541b5e8656b9ca7ac222f3166043db [INFO] running `Command { std: "docker" "start" "-a" "3081e5cfe7abd7995db426e25b9c2c0980541b5e8656b9ca7ac222f3166043db", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "3081e5cfe7abd7995db426e25b9c2c0980541b5e8656b9ca7ac222f3166043db", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "3081e5cfe7abd7995db426e25b9c2c0980541b5e8656b9ca7ac222f3166043db", kill_on_drop: false }` [INFO] [stdout] 3081e5cfe7abd7995db426e25b9c2c0980541b5e8656b9ca7ac222f3166043db [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-5-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-5-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:7ad1b28ee6f5f7f699f6cf7015098d6ccdd96d6f2d78dd06228f5b4c9faf309c" "/opt/rustwide/cargo-home/bin/cargo" "+b83b707f97d809763b7861afa7638871f3339a33" "build" "--frozen" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] 2d2a460f01c5f9485a229e24098b45b9f32c168fb3d8342a4c1f3beb763876a1 [INFO] running `Command { std: "docker" "start" "-a" "2d2a460f01c5f9485a229e24098b45b9f32c168fb3d8342a4c1f3beb763876a1", kill_on_drop: false }` [INFO] [stderr] Compiling bytemuck v1.23.2 [INFO] [stderr] Compiling num-traits v0.2.19 [INFO] [stderr] Compiling matrixmultiply v0.3.10 [INFO] [stderr] Compiling semver v0.1.20 [INFO] [stderr] Compiling regex-syntax v0.8.6 [INFO] [stderr] Compiling cmake v0.1.54 [INFO] [stderr] Compiling syn v2.0.106 [INFO] [stderr] Compiling getrandom v0.2.16 [INFO] [stderr] Compiling syn v1.0.109 [INFO] [stderr] Compiling hashbrown v0.15.5 [INFO] [stderr] Compiling csv-core v0.1.12 [INFO] [stderr] Compiling fixedbitset v0.4.2 [INFO] [stderr] Compiling itertools v0.11.0 [INFO] [stderr] Compiling fxhash v0.2.1 [INFO] [stderr] Compiling bytecount v0.6.9 [INFO] [stderr] Compiling strum v0.25.0 [INFO] [stderr] Compiling editdistancek v1.0.2 [INFO] [stderr] Compiling triple_accel v0.4.0 [INFO] [stderr] Compiling rand_core v0.6.4 [INFO] [stderr] Compiling custom_derive v0.1.7 [INFO] [stderr] Compiling rustc_version v0.1.7 [INFO] [stderr] Compiling safe_arch v0.7.4 [INFO] [stderr] Compiling newtype_derive v0.1.6 [INFO] [stderr] Compiling biodiff-wfa2-sys v2.3.5 [INFO] [stderr] Compiling rand_chacha v0.3.1 [INFO] [stderr] Compiling rand v0.8.5 [INFO] [stderr] Compiling indexmap v2.11.0 [INFO] [stderr] Compiling wide v0.7.33 [INFO] [stderr] Compiling num-integer v0.1.46 [INFO] [stderr] Compiling num-complex v0.4.6 [INFO] [stderr] Compiling approx v0.5.1 [INFO] [stderr] Compiling itertools-num v0.1.3 [INFO] [stderr] Compiling ordered-float v3.9.2 [INFO] [stderr] Compiling num-rational v0.4.2 [INFO] [stderr] Compiling ndarray v0.15.6 [INFO] [stderr] Compiling rand_distr v0.4.3 [INFO] [stderr] Compiling petgraph v0.6.5 [INFO] [stderr] Compiling regex-automata v0.4.10 [INFO] [stderr] Compiling simba v0.6.0 [INFO] [stderr] Compiling nalgebra-macros v0.1.0 [INFO] [stderr] Compiling serde_derive v1.0.219 [INFO] [stderr] Compiling thiserror-impl v1.0.69 [INFO] [stderr] Compiling strum_macros v0.26.4 [INFO] [stderr] Compiling enum-map-derive v0.17.0 [INFO] [stderr] Compiling derive-new v0.6.0 [INFO] [stderr] Compiling strum_macros v0.25.3 [INFO] [stderr] Compiling enum-map v2.7.3 [INFO] [stderr] Compiling thiserror v1.0.69 [INFO] [stderr] Compiling regex v1.11.2 [INFO] [stderr] Compiling bio-types v1.0.4 [INFO] [stderr] Compiling serde v1.0.219 [INFO] [stderr] Compiling multimap v0.9.1 [INFO] [stderr] Compiling bv v0.11.1 [INFO] [stderr] Compiling vec_map v0.8.2 [INFO] [stderr] Compiling csv v1.3.1 [INFO] [stderr] Compiling nalgebra v0.29.0 [INFO] [stderr] Compiling statrs v0.16.1 [INFO] [stderr] Compiling bio v1.6.0 [INFO] [stderr] Compiling biodiff-align v1.2.1-preview (/opt/rustwide/workdir) [INFO] [stderr] Finished `dev` profile [unoptimized + debuginfo] target(s) in 48.41s [INFO] running `Command { std: "docker" "inspect" "2d2a460f01c5f9485a229e24098b45b9f32c168fb3d8342a4c1f3beb763876a1", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "2d2a460f01c5f9485a229e24098b45b9f32c168fb3d8342a4c1f3beb763876a1", kill_on_drop: false }` [INFO] [stdout] 2d2a460f01c5f9485a229e24098b45b9f32c168fb3d8342a4c1f3beb763876a1 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-5-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-5-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:7ad1b28ee6f5f7f699f6cf7015098d6ccdd96d6f2d78dd06228f5b4c9faf309c" "/opt/rustwide/cargo-home/bin/cargo" "+b83b707f97d809763b7861afa7638871f3339a33" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] abe2ebba4bbba0df02d591144de68b0c65e8a97a9e2bcd8b664a450a20cf4269 [INFO] running `Command { std: "docker" "start" "-a" "abe2ebba4bbba0df02d591144de68b0c65e8a97a9e2bcd8b664a450a20cf4269", kill_on_drop: false }` [INFO] [stderr] Compiling biodiff-align v1.2.1-preview (/opt/rustwide/workdir) [INFO] [stderr] Finished `test` profile [unoptimized + debuginfo] target(s) in 0.97s [INFO] running `Command { std: "docker" "inspect" "abe2ebba4bbba0df02d591144de68b0c65e8a97a9e2bcd8b664a450a20cf4269", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "abe2ebba4bbba0df02d591144de68b0c65e8a97a9e2bcd8b664a450a20cf4269", kill_on_drop: false }` [INFO] [stdout] abe2ebba4bbba0df02d591144de68b0c65e8a97a9e2bcd8b664a450a20cf4269 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-5-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-5-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:7ad1b28ee6f5f7f699f6cf7015098d6ccdd96d6f2d78dd06228f5b4c9faf309c" "/opt/rustwide/cargo-home/bin/cargo" "+b83b707f97d809763b7861afa7638871f3339a33" "test" "--frozen", kill_on_drop: false }` [INFO] [stdout] 0d3f0d25dfff9c4eae067b2e8c4b59f31ba3da56a282a9e8c92cbed16119fa57 [INFO] running `Command { std: "docker" "start" "-a" "0d3f0d25dfff9c4eae067b2e8c4b59f31ba3da56a282a9e8c92cbed16119fa57", kill_on_drop: false }` [INFO] [stderr] Finished `test` profile [unoptimized + debuginfo] target(s) in 0.14s [INFO] [stderr] Running unittests src/lib.rs (/opt/rustwide/target/debug/deps/biodiff_align-9e3f48fb462a990c) [INFO] [stderr] Doc-tests biodiff_align [INFO] [stdout] [INFO] [stdout] running 0 tests [INFO] [stdout] [INFO] [stdout] test result: ok. 0 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.00s [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] running 0 tests [INFO] [stdout] [INFO] [stdout] test result: ok. 0 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.00s [INFO] [stdout] [INFO] running `Command { std: "docker" "inspect" "0d3f0d25dfff9c4eae067b2e8c4b59f31ba3da56a282a9e8c92cbed16119fa57", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "0d3f0d25dfff9c4eae067b2e8c4b59f31ba3da56a282a9e8c92cbed16119fa57", kill_on_drop: false }` [INFO] [stdout] 0d3f0d25dfff9c4eae067b2e8c4b59f31ba3da56a282a9e8c92cbed16119fa57