[INFO] cloning repository https://github.com/theabhirath/pairsnp-rs
[INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/theabhirath/pairsnp-rs" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Ftheabhirath%2Fpairsnp-rs", kill_on_drop: false }`
[INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Ftheabhirath%2Fpairsnp-rs'...
[INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }`
[INFO] [stdout] 5b7b33f0377fd5fdb23fc5fcb223fa42baa3fc0f
[INFO] testing theabhirath/pairsnp-rs against try#b83b707f97d809763b7861afa7638871f3339a33 for pr-145838-1
[INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Ftheabhirath%2Fpairsnp-rs" "/workspace/builds/worker-0-tc2/source", kill_on_drop: false }`
[INFO] [stderr] Cloning into '/workspace/builds/worker-0-tc2/source'...
[INFO] [stderr] done.
[INFO] started tweaking git repo https://github.com/theabhirath/pairsnp-rs
[INFO] finished tweaking git repo https://github.com/theabhirath/pairsnp-rs
[INFO] tweaked toml for git repo https://github.com/theabhirath/pairsnp-rs written to /workspace/builds/worker-0-tc2/source/Cargo.toml
[INFO] validating manifest of git repo https://github.com/theabhirath/pairsnp-rs on toolchain b83b707f97d809763b7861afa7638871f3339a33
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+b83b707f97d809763b7861afa7638871f3339a33" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] crate git repo https://github.com/theabhirath/pairsnp-rs already has a lockfile, it will not be regenerated
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+b83b707f97d809763b7861afa7638871f3339a33" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-0-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-0-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:7ad1b28ee6f5f7f699f6cf7015098d6ccdd96d6f2d78dd06228f5b4c9faf309c" "/opt/rustwide/cargo-home/bin/cargo" "+b83b707f97d809763b7861afa7638871f3339a33" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] [stdout] 18144f6e36e738c4de6db1d83159fb2b9453bb707774dfbb987817a6779a44a5
[INFO] running `Command { std: "docker" "start" "-a" "18144f6e36e738c4de6db1d83159fb2b9453bb707774dfbb987817a6779a44a5", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "18144f6e36e738c4de6db1d83159fb2b9453bb707774dfbb987817a6779a44a5", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "18144f6e36e738c4de6db1d83159fb2b9453bb707774dfbb987817a6779a44a5", kill_on_drop: false }`
[INFO] [stdout] 18144f6e36e738c4de6db1d83159fb2b9453bb707774dfbb987817a6779a44a5
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-0-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-0-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:7ad1b28ee6f5f7f699f6cf7015098d6ccdd96d6f2d78dd06228f5b4c9faf309c" "/opt/rustwide/cargo-home/bin/cargo" "+b83b707f97d809763b7861afa7638871f3339a33" "build" "--frozen" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] f366939b7fcd396f0e6519995c8e3b581f33cc44ef33e6412430808bce3ec3a7
[INFO] running `Command { std: "docker" "start" "-a" "f366939b7fcd396f0e6519995c8e3b581f33cc44ef33e6412430808bce3ec3a7", kill_on_drop: false }`
[INFO] [stderr]    Compiling libc v0.2.172
[INFO] [stderr]    Compiling crossbeam-utils v0.8.21
[INFO] [stderr]    Compiling anstyle-query v1.1.2
[INFO] [stderr]    Compiling colorchoice v1.0.3
[INFO] [stderr]    Compiling miniz_oxide v0.8.8
[INFO] [stderr]    Compiling syn v2.0.101
[INFO] [stderr]    Compiling clap_lex v0.7.4
[INFO] [stderr]    Compiling buffer-redux v1.0.2
[INFO] [stderr]    Compiling anstream v0.6.18
[INFO] [stderr]    Compiling either v1.15.0
[INFO] [stderr]    Compiling bytemuck v1.23.0
[INFO] [stderr]    Compiling bytecount v0.6.8
[INFO] [stderr]    Compiling clap_builder v4.5.37
[INFO] [stderr]    Compiling roaring v0.10.12
[INFO] [stderr]    Compiling flate2 v1.1.1
[INFO] [stderr]    Compiling crossbeam-epoch v0.9.18
[INFO] [stderr]    Compiling crossbeam-deque v0.8.6
[INFO] [stderr]    Compiling rayon-core v1.12.1
[INFO] [stderr]    Compiling jobserver v0.1.33
[INFO] [stderr]    Compiling rayon v1.10.0
[INFO] [stderr]    Compiling cc v1.2.22
[INFO] [stderr]    Compiling clap_derive v4.5.32
[INFO] [stderr]    Compiling zstd-sys v2.0.15+zstd.1.5.7
[INFO] [stderr]    Compiling liblzma-sys v0.3.13
[INFO] [stderr]    Compiling bzip2-sys v0.1.13+1.0.8
[INFO] [stderr]    Compiling clap v4.5.37
[INFO] [stderr]    Compiling zstd-safe v7.2.4
[INFO] [stderr]    Compiling zstd v0.13.3
[INFO] [stderr]    Compiling liblzma v0.3.6
[INFO] [stderr]    Compiling bzip2 v0.4.4
[INFO] [stderr]    Compiling needletail v0.6.3
[INFO] [stderr]    Compiling pairsnp-rs v0.2.1 (/opt/rustwide/workdir)
[INFO] [stderr]     Finished `dev` profile [unoptimized + debuginfo] target(s) in 11.48s
[INFO] running `Command { std: "docker" "inspect" "f366939b7fcd396f0e6519995c8e3b581f33cc44ef33e6412430808bce3ec3a7", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "f366939b7fcd396f0e6519995c8e3b581f33cc44ef33e6412430808bce3ec3a7", kill_on_drop: false }`
[INFO] [stdout] f366939b7fcd396f0e6519995c8e3b581f33cc44ef33e6412430808bce3ec3a7
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-0-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-0-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:7ad1b28ee6f5f7f699f6cf7015098d6ccdd96d6f2d78dd06228f5b4c9faf309c" "/opt/rustwide/cargo-home/bin/cargo" "+b83b707f97d809763b7861afa7638871f3339a33" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] d63eda0dd102dff1f76075d310d559b8811d36312eecbe30c41267ed7df88c43
[INFO] running `Command { std: "docker" "start" "-a" "d63eda0dd102dff1f76075d310d559b8811d36312eecbe30c41267ed7df88c43", kill_on_drop: false }`
[INFO] [stderr]    Compiling pairsnp-rs v0.2.1 (/opt/rustwide/workdir)
[INFO] [stderr]     Finished `test` profile [unoptimized + debuginfo] target(s) in 0.40s
[INFO] running `Command { std: "docker" "inspect" "d63eda0dd102dff1f76075d310d559b8811d36312eecbe30c41267ed7df88c43", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "d63eda0dd102dff1f76075d310d559b8811d36312eecbe30c41267ed7df88c43", kill_on_drop: false }`
[INFO] [stdout] d63eda0dd102dff1f76075d310d559b8811d36312eecbe30c41267ed7df88c43
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-0-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-0-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:7ad1b28ee6f5f7f699f6cf7015098d6ccdd96d6f2d78dd06228f5b4c9faf309c" "/opt/rustwide/cargo-home/bin/cargo" "+b83b707f97d809763b7861afa7638871f3339a33" "test" "--frozen", kill_on_drop: false }`
[INFO] [stdout] 0c2643bfcccbf32984bc965025e5bde744d737304d400f91a8ce350870cdce9f
[INFO] running `Command { std: "docker" "start" "-a" "0c2643bfcccbf32984bc965025e5bde744d737304d400f91a8ce350870cdce9f", kill_on_drop: false }`
[INFO] [stderr]     Finished `test` profile [unoptimized + debuginfo] target(s) in 0.03s
[INFO] [stderr]      Running unittests src/main.rs (/opt/rustwide/target/debug/deps/pairsnp_rs-e992c3257b06c219)
[INFO] [stdout] 
[INFO] [stdout] running 7 tests
[INFO] [stdout] test tests::test_parallel_build_nucleotide_bitmaps ... ignored
[INFO] [stdout] test tests::test_write_matrix_with_indices ... ok
[INFO] [stdout] test tests::test_write_matrix_sparse ... ok
[INFO] [stdout] test tests::test_write_matrix_dense ... ok
[INFO] [stdout] test tests::test_calculate_pairwise_snp_distances ... ok
[INFO] [stdout] test tests::test_build_nucleotide_bitmaps ... ok
[INFO] [stdout] test tests::test_build_nucleotide_bitmaps_invalid_char - should panic ... ok
[INFO] [stdout] 
[INFO] [stdout] test result: ok. 6 passed; 0 failed; 1 ignored; 0 measured; 0 filtered out; finished in 0.03s
[INFO] [stdout] 
[INFO] running `Command { std: "docker" "inspect" "0c2643bfcccbf32984bc965025e5bde744d737304d400f91a8ce350870cdce9f", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "0c2643bfcccbf32984bc965025e5bde744d737304d400f91a8ce350870cdce9f", kill_on_drop: false }`
[INFO] [stdout] 0c2643bfcccbf32984bc965025e5bde744d737304d400f91a8ce350870cdce9f