[INFO] fetching crate rustbam 0.2.0... [INFO] testing rustbam-0.2.0 against master#cdb45c87e2cd43495379f7e867e3cc15dcee9f93 for pr-145838-1 [INFO] extracting crate rustbam 0.2.0 into /workspace/builds/worker-7-tc1/source [INFO] started tweaking crates.io crate rustbam 0.2.0 [INFO] removed 0 missing tests [INFO] finished tweaking crates.io crate rustbam 0.2.0 [INFO] tweaked toml for crates.io crate rustbam 0.2.0 written to /workspace/builds/worker-7-tc1/source/Cargo.toml [INFO] validating manifest of crates.io crate rustbam 0.2.0 on toolchain cdb45c87e2cd43495379f7e867e3cc15dcee9f93 [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+cdb45c87e2cd43495379f7e867e3cc15dcee9f93" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] crate crates.io crate rustbam 0.2.0 already has a lockfile, it will not be regenerated [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+cdb45c87e2cd43495379f7e867e3cc15dcee9f93" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] Downloading crates ... [INFO] [stderr] Downloaded pyo3-macros v0.20.3 [INFO] [stderr] Downloaded pyo3-macros-backend v0.20.3 [INFO] [stderr] Downloaded pyo3-ffi v0.20.3 [INFO] [stderr] Downloaded pyo3-build-config v0.20.3 [INFO] [stderr] Downloaded rust-htslib v0.43.1 [INFO] [stderr] Downloaded pyo3 v0.20.3 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-7-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-7-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:7ad1b28ee6f5f7f699f6cf7015098d6ccdd96d6f2d78dd06228f5b4c9faf309c" "/opt/rustwide/cargo-home/bin/cargo" "+cdb45c87e2cd43495379f7e867e3cc15dcee9f93" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] b4ae1775a60c3b690a495f320985fdc1f04937edabc58d85ac0fe167eac05e92 [INFO] running `Command { std: "docker" "start" "-a" "b4ae1775a60c3b690a495f320985fdc1f04937edabc58d85ac0fe167eac05e92", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "b4ae1775a60c3b690a495f320985fdc1f04937edabc58d85ac0fe167eac05e92", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "b4ae1775a60c3b690a495f320985fdc1f04937edabc58d85ac0fe167eac05e92", kill_on_drop: false }` [INFO] [stdout] b4ae1775a60c3b690a495f320985fdc1f04937edabc58d85ac0fe167eac05e92 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-7-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-7-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:7ad1b28ee6f5f7f699f6cf7015098d6ccdd96d6f2d78dd06228f5b4c9faf309c" "/opt/rustwide/cargo-home/bin/cargo" "+cdb45c87e2cd43495379f7e867e3cc15dcee9f93" "build" "--frozen" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] 5484b7770fcd89c7cf7e0d79349b784c43981b4d28d04e74d4ce30f805eb1c1e [INFO] running `Command { std: "docker" "start" "-a" "5484b7770fcd89c7cf7e0d79349b784c43981b4d28d04e74d4ce30f805eb1c1e", kill_on_drop: false }` [INFO] [stderr] Compiling proc-macro2 v1.0.93 [INFO] [stderr] Compiling unicode-ident v1.0.16 [INFO] [stderr] Compiling libc v0.2.169 [INFO] [stderr] Compiling pkg-config v0.3.31 [INFO] [stderr] Compiling target-lexicon v0.12.16 [INFO] [stderr] Compiling once_cell v1.20.2 [INFO] [stderr] Compiling writeable v0.5.5 [INFO] [stderr] Compiling litemap v0.7.4 [INFO] [stderr] Compiling smallvec v1.13.2 [INFO] [stderr] Compiling icu_locid_transform_data v1.5.0 [INFO] [stderr] Compiling icu_properties_data v1.5.0 [INFO] [stderr] Compiling rustversion v1.0.19 [INFO] [stderr] Compiling semver v0.1.20 [INFO] [stderr] Compiling quick-error v1.2.3 [INFO] [stderr] Compiling write16 v1.0.0 [INFO] [stderr] Compiling icu_normalizer_data v1.5.0 [INFO] [stderr] Compiling utf16_iter v1.0.5 [INFO] [stderr] Compiling rustc_version v0.1.7 [INFO] [stderr] Compiling fs-utils v1.1.4 [INFO] [stderr] Compiling syn v1.0.109 [INFO] [stderr] Compiling glob v0.3.2 [INFO] [stderr] Compiling regex-automata v0.4.9 [INFO] [stderr] Compiling memoffset v0.9.1 [INFO] [stderr] Compiling percent-encoding v2.3.1 [INFO] [stderr] Compiling portable-atomic v1.10.0 [INFO] [stderr] Compiling custom_derive v0.1.7 [INFO] [stderr] Compiling linear-map v1.2.0 [INFO] [stderr] Compiling indoc v2.0.5 [INFO] [stderr] Compiling newtype_derive v0.1.6 [INFO] [stderr] Compiling either v1.13.0 [INFO] [stderr] Compiling ieee754 v0.2.6 [INFO] [stderr] Compiling form_urlencoded v1.2.1 [INFO] [stderr] Compiling unindent v0.2.3 [INFO] [stderr] Compiling rayon v1.10.0 [INFO] [stderr] Compiling quote v1.0.38 [INFO] [stderr] Compiling pyo3-build-config v0.20.3 [INFO] [stderr] Compiling jobserver v0.1.32 [INFO] [stderr] Compiling parking_lot_core v0.9.10 [INFO] [stderr] Compiling parking_lot v0.12.3 [INFO] [stderr] Compiling syn v2.0.98 [INFO] [stderr] Compiling cc v1.2.12 [INFO] [stderr] Compiling pyo3-ffi v0.20.3 [INFO] [stderr] Compiling pyo3 v0.20.3 [INFO] [stderr] Compiling regex v1.11.1 [INFO] [stderr] Compiling cmake v0.1.53 [INFO] [stderr] Compiling openssl-src v300.4.1+3.4.0 [INFO] [stderr] Compiling libz-sys v1.1.21 [INFO] [stderr] Compiling curl-sys v0.4.78+curl-8.11.0 [INFO] [stderr] Compiling bzip2-sys v0.1.11+1.0.8 [INFO] [stderr] Compiling lzma-sys v0.1.20 [INFO] [stderr] Compiling hts-sys v2.2.0 [INFO] [stderr] Compiling openssl-sys v0.9.105 [INFO] [stderr] Compiling derive-new v0.5.9 [INFO] [stderr] Compiling synstructure v0.13.1 [INFO] [stderr] Compiling pyo3-macros-backend v0.20.3 [INFO] [stderr] Compiling zerofrom-derive v0.1.5 [INFO] [stderr] Compiling yoke-derive v0.7.5 [INFO] [stderr] Compiling zerovec-derive v0.10.3 [INFO] [stderr] Compiling displaydoc v0.2.5 [INFO] [stderr] Compiling icu_provider_macros v1.5.0 [INFO] [stderr] Compiling thiserror-impl v1.0.69 [INFO] [stderr] Compiling derive-new v0.6.0 [INFO] [stderr] Compiling strum_macros v0.26.4 [INFO] [stderr] Compiling thiserror v1.0.69 [INFO] [stderr] Compiling zerofrom v0.1.5 [INFO] [stderr] Compiling bio-types v1.0.4 [INFO] [stderr] Compiling yoke v0.7.5 [INFO] [stderr] Compiling zerovec v0.10.4 [INFO] [stderr] Compiling pyo3-macros v0.20.3 [INFO] [stderr] Compiling tinystr v0.7.6 [INFO] [stderr] Compiling icu_collections v1.5.0 [INFO] [stderr] Compiling icu_locid v1.5.0 [INFO] [stderr] Compiling icu_provider v1.5.0 [INFO] [stderr] Compiling icu_locid_transform v1.5.0 [INFO] [stderr] Compiling icu_properties v1.5.1 [INFO] [stderr] Compiling icu_normalizer v1.5.0 [INFO] [stderr] Compiling idna_adapter v1.2.0 [INFO] [stderr] Compiling idna v1.0.3 [INFO] [stderr] Compiling url v2.5.4 [INFO] [stderr] Compiling rust-htslib v0.43.1 [INFO] [stderr] Compiling rustbam v0.2.0 (/opt/rustwide/workdir) [INFO] [stderr] Finished `dev` profile [unoptimized + debuginfo] target(s) in 2m 32s [INFO] running `Command { std: "docker" "inspect" "5484b7770fcd89c7cf7e0d79349b784c43981b4d28d04e74d4ce30f805eb1c1e", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "5484b7770fcd89c7cf7e0d79349b784c43981b4d28d04e74d4ce30f805eb1c1e", kill_on_drop: false }` [INFO] [stdout] 5484b7770fcd89c7cf7e0d79349b784c43981b4d28d04e74d4ce30f805eb1c1e [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-7-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-7-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:7ad1b28ee6f5f7f699f6cf7015098d6ccdd96d6f2d78dd06228f5b4c9faf309c" "/opt/rustwide/cargo-home/bin/cargo" "+cdb45c87e2cd43495379f7e867e3cc15dcee9f93" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] 025b620fd7e0d09f9c7ee7aa7d2cc5b8f55404dcd267a94db5cbb270fe691bfe [INFO] running `Command { std: "docker" "start" "-a" "025b620fd7e0d09f9c7ee7aa7d2cc5b8f55404dcd267a94db5cbb270fe691bfe", kill_on_drop: false }` [INFO] [stderr] Compiling rustbam v0.2.0 (/opt/rustwide/workdir) [INFO] [stderr] Finished `test` profile [unoptimized + debuginfo] target(s) in 1.36s [INFO] running `Command { std: "docker" "inspect" "025b620fd7e0d09f9c7ee7aa7d2cc5b8f55404dcd267a94db5cbb270fe691bfe", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "025b620fd7e0d09f9c7ee7aa7d2cc5b8f55404dcd267a94db5cbb270fe691bfe", kill_on_drop: false }` [INFO] [stdout] 025b620fd7e0d09f9c7ee7aa7d2cc5b8f55404dcd267a94db5cbb270fe691bfe [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-7-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-7-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:7ad1b28ee6f5f7f699f6cf7015098d6ccdd96d6f2d78dd06228f5b4c9faf309c" "/opt/rustwide/cargo-home/bin/cargo" "+cdb45c87e2cd43495379f7e867e3cc15dcee9f93" "test" "--frozen", kill_on_drop: false }` [INFO] [stdout] 23ef3a8900eaea0f7495cee9b81151e845f1ee1f629c0c7a7ee0bb6bd71f97a6 [INFO] running `Command { std: "docker" "start" "-a" "23ef3a8900eaea0f7495cee9b81151e845f1ee1f629c0c7a7ee0bb6bd71f97a6", kill_on_drop: false }` [INFO] [stderr] Finished `test` profile [unoptimized + debuginfo] target(s) in 0.13s [INFO] [stderr] Running unittests src/lib.rs (/opt/rustwide/target/debug/deps/rustbam-f573d0d42ccb1a07) [INFO] [stderr] Running tests/integration_test.rs (/opt/rustwide/target/debug/deps/integration_test-fb06ea7a8d02d709) [INFO] [stdout] [INFO] [stdout] running 0 tests [INFO] [stdout] [INFO] [stdout] test result: ok. 0 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.00s [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] running 1 test [INFO] [stdout] test tests::test_load_bam_file ... ok [INFO] [stdout] [INFO] [stdout] test result: ok. 1 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.00s [INFO] [stdout] [INFO] [stderr] Doc-tests rustbam [INFO] [stdout] [INFO] [stdout] running 0 tests [INFO] [stdout] [INFO] [stdout] test result: ok. 0 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.00s [INFO] [stdout] [INFO] running `Command { std: "docker" "inspect" "23ef3a8900eaea0f7495cee9b81151e845f1ee1f629c0c7a7ee0bb6bd71f97a6", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "23ef3a8900eaea0f7495cee9b81151e845f1ee1f629c0c7a7ee0bb6bd71f97a6", kill_on_drop: false }` [INFO] [stdout] 23ef3a8900eaea0f7495cee9b81151e845f1ee1f629c0c7a7ee0bb6bd71f97a6