[INFO] fetching crate phenopackets 0.2.2-post1... [INFO] testing phenopackets-0.2.2-post1 against master#cdb45c87e2cd43495379f7e867e3cc15dcee9f93 for pr-145838-1 [INFO] extracting crate phenopackets 0.2.2-post1 into /workspace/builds/worker-4-tc1/source [INFO] started tweaking crates.io crate phenopackets 0.2.2-post1 [INFO] removed 0 missing tests [INFO] finished tweaking crates.io crate phenopackets 0.2.2-post1 [INFO] tweaked toml for crates.io crate phenopackets 0.2.2-post1 written to /workspace/builds/worker-4-tc1/source/Cargo.toml [INFO] validating manifest of crates.io crate phenopackets 0.2.2-post1 on toolchain cdb45c87e2cd43495379f7e867e3cc15dcee9f93 [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+cdb45c87e2cd43495379f7e867e3cc15dcee9f93" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] crate crates.io crate phenopackets 0.2.2-post1 already has a lockfile, it will not be regenerated [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+cdb45c87e2cd43495379f7e867e3cc15dcee9f93" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-4-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-4-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:7ad1b28ee6f5f7f699f6cf7015098d6ccdd96d6f2d78dd06228f5b4c9faf309c" "/opt/rustwide/cargo-home/bin/cargo" "+cdb45c87e2cd43495379f7e867e3cc15dcee9f93" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] cec2bb142f0a2ae39f0949aad0c1a8cfd2f56cb4219d11264d42dfc044a21ef4 [INFO] running `Command { std: "docker" "start" "-a" "cec2bb142f0a2ae39f0949aad0c1a8cfd2f56cb4219d11264d42dfc044a21ef4", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "cec2bb142f0a2ae39f0949aad0c1a8cfd2f56cb4219d11264d42dfc044a21ef4", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "cec2bb142f0a2ae39f0949aad0c1a8cfd2f56cb4219d11264d42dfc044a21ef4", kill_on_drop: false }` [INFO] [stdout] cec2bb142f0a2ae39f0949aad0c1a8cfd2f56cb4219d11264d42dfc044a21ef4 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-4-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-4-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:7ad1b28ee6f5f7f699f6cf7015098d6ccdd96d6f2d78dd06228f5b4c9faf309c" "/opt/rustwide/cargo-home/bin/cargo" "+cdb45c87e2cd43495379f7e867e3cc15dcee9f93" "build" "--frozen" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] 41b413d7a1b21dd0cdd63205803764418341ffd2fce69bf06139ae0bd101c789 [INFO] running `Command { std: "docker" "start" "-a" "41b413d7a1b21dd0cdd63205803764418341ffd2fce69bf06139ae0bd101c789", kill_on_drop: false }` [INFO] [stderr] Compiling anyhow v1.0.97 [INFO] [stderr] Compiling itertools v0.14.0 [INFO] [stderr] Compiling bytes v1.10.1 [INFO] [stderr] Compiling syn v2.0.100 [INFO] [stderr] Compiling prost-derive v0.13.5 [INFO] [stderr] Compiling prost v0.13.5 [INFO] [stderr] Compiling prost-types v0.13.5 [INFO] [stderr] Compiling phenopackets v0.2.2-post1 (/opt/rustwide/workdir) [INFO] [stderr] Finished `dev` profile [unoptimized + debuginfo] target(s) in 10.29s [INFO] running `Command { std: "docker" "inspect" "41b413d7a1b21dd0cdd63205803764418341ffd2fce69bf06139ae0bd101c789", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "41b413d7a1b21dd0cdd63205803764418341ffd2fce69bf06139ae0bd101c789", kill_on_drop: false }` [INFO] [stdout] 41b413d7a1b21dd0cdd63205803764418341ffd2fce69bf06139ae0bd101c789 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-4-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-4-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:7ad1b28ee6f5f7f699f6cf7015098d6ccdd96d6f2d78dd06228f5b4c9faf309c" "/opt/rustwide/cargo-home/bin/cargo" "+cdb45c87e2cd43495379f7e867e3cc15dcee9f93" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] 9d8abb052f45ace694d7e634ee4047d84e422b2e238673f173cc5d2b86e1c719 [INFO] running `Command { std: "docker" "start" "-a" "9d8abb052f45ace694d7e634ee4047d84e422b2e238673f173cc5d2b86e1c719", kill_on_drop: false }` [INFO] [stderr] Compiling serde_json v1.0.140 [INFO] [stderr] Compiling phenopackets v0.2.2-post1 (/opt/rustwide/workdir) [INFO] [stderr] Finished `test` profile [unoptimized + debuginfo] target(s) in 4.61s [INFO] running `Command { std: "docker" "inspect" "9d8abb052f45ace694d7e634ee4047d84e422b2e238673f173cc5d2b86e1c719", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "9d8abb052f45ace694d7e634ee4047d84e422b2e238673f173cc5d2b86e1c719", kill_on_drop: false }` [INFO] [stdout] 9d8abb052f45ace694d7e634ee4047d84e422b2e238673f173cc5d2b86e1c719 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-4-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-4-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:7ad1b28ee6f5f7f699f6cf7015098d6ccdd96d6f2d78dd06228f5b4c9faf309c" "/opt/rustwide/cargo-home/bin/cargo" "+cdb45c87e2cd43495379f7e867e3cc15dcee9f93" "test" "--frozen", kill_on_drop: false }` [INFO] [stdout] bb35f2b37b94b73ce3c4250d9ab7c88ca19441118b723f8e3797e9df109c1cdb [INFO] running `Command { std: "docker" "start" "-a" "bb35f2b37b94b73ce3c4250d9ab7c88ca19441118b723f8e3797e9df109c1cdb", kill_on_drop: false }` [INFO] [stderr] Finished `test` profile [unoptimized + debuginfo] target(s) in 0.07s [INFO] [stderr] Running unittests src/lib.rs (/opt/rustwide/target/debug/deps/phenopackets-41efd32a40e9f7ad) [INFO] [stdout] [INFO] [stdout] running 10 tests [INFO] [stdout] test tests::api::top_level_elements_are_partial_eq ... ok [INFO] [stdout] test tests::api::top_level_elements_are_debug ... ok [INFO] [stdout] test tests::protobuf::v1::decode_cohort ... ok [INFO] [stdout] test tests::api::top_level_elements_are_send_and_sync ... ok [INFO] [stdout] test tests::protobuf::v2::decode_cohort ... ok [INFO] [stdout] test tests::protobuf::v1::decode_phenopacket ... ok [INFO] [stdout] test tests::api::top_level_elements_can_be_cloned ... ok [INFO] [stderr] Running tests/basic.rs (/opt/rustwide/target/debug/deps/basic-483f96b4f878fe06) [INFO] [stdout] test tests::protobuf::v2::decode_phenopacket ... ok [INFO] [stdout] test tests::protobuf::v2::decode_family ... ok [INFO] [stdout] test tests::protobuf::v1::decode_family ... ok [INFO] [stdout] [INFO] [stdout] test result: ok. 10 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.01s [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] running 2 tests [INFO] [stdout] test ontology_class ... ok [INFO] [stdout] test phenotypic_feature ... ok [INFO] [stdout] [INFO] [stdout] test result: ok. 2 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.00s [INFO] [stdout] [INFO] [stderr] Doc-tests phenopackets [INFO] [stdout] [INFO] [stdout] running 3 tests [INFO] [stdout] test src/lib.rs - (line 13) ... ok [INFO] [stdout] test src/lib.rs - (line 47) ... ok [INFO] [stdout] test src/lib.rs - (line 65) ... ok [INFO] [stdout] [INFO] [stdout] test result: ok. 3 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.63s [INFO] [stdout] [INFO] running `Command { std: "docker" "inspect" "bb35f2b37b94b73ce3c4250d9ab7c88ca19441118b723f8e3797e9df109c1cdb", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "bb35f2b37b94b73ce3c4250d9ab7c88ca19441118b723f8e3797e9df109c1cdb", kill_on_drop: false }` [INFO] [stdout] bb35f2b37b94b73ce3c4250d9ab7c88ca19441118b723f8e3797e9df109c1cdb