[INFO] fetching crate pairsnp-rs 0.2.1... [INFO] testing pairsnp-rs-0.2.1 against master#cdb45c87e2cd43495379f7e867e3cc15dcee9f93 for pr-145838-1 [INFO] extracting crate pairsnp-rs 0.2.1 into /workspace/builds/worker-1-tc1/source [INFO] started tweaking crates.io crate pairsnp-rs 0.2.1 [INFO] finished tweaking crates.io crate pairsnp-rs 0.2.1 [INFO] tweaked toml for crates.io crate pairsnp-rs 0.2.1 written to /workspace/builds/worker-1-tc1/source/Cargo.toml [INFO] validating manifest of crates.io crate pairsnp-rs 0.2.1 on toolchain cdb45c87e2cd43495379f7e867e3cc15dcee9f93 [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+cdb45c87e2cd43495379f7e867e3cc15dcee9f93" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] crate crates.io crate pairsnp-rs 0.2.1 already has a lockfile, it will not be regenerated [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+cdb45c87e2cd43495379f7e867e3cc15dcee9f93" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] Downloading crates ... [INFO] [stderr] Downloaded liblzma v0.3.6 [INFO] [stderr] Downloaded needletail v0.6.3 [INFO] [stderr] Downloaded liblzma-sys v0.3.13 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-1-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-1-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:7ad1b28ee6f5f7f699f6cf7015098d6ccdd96d6f2d78dd06228f5b4c9faf309c" "/opt/rustwide/cargo-home/bin/cargo" "+cdb45c87e2cd43495379f7e867e3cc15dcee9f93" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] a74b2f2f9e1a5f5bc00a67ad984f21b06d1dabea53bdf3a96041d4f621ae8769 [INFO] running `Command { std: "docker" "start" "-a" "a74b2f2f9e1a5f5bc00a67ad984f21b06d1dabea53bdf3a96041d4f621ae8769", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "a74b2f2f9e1a5f5bc00a67ad984f21b06d1dabea53bdf3a96041d4f621ae8769", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "a74b2f2f9e1a5f5bc00a67ad984f21b06d1dabea53bdf3a96041d4f621ae8769", kill_on_drop: false }` [INFO] [stdout] a74b2f2f9e1a5f5bc00a67ad984f21b06d1dabea53bdf3a96041d4f621ae8769 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-1-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-1-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:7ad1b28ee6f5f7f699f6cf7015098d6ccdd96d6f2d78dd06228f5b4c9faf309c" "/opt/rustwide/cargo-home/bin/cargo" "+cdb45c87e2cd43495379f7e867e3cc15dcee9f93" "build" "--frozen" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] f4491f0490ea663f4172ed415cf569936b3082a751182f1e6a08ace0e0d91f0a [INFO] running `Command { std: "docker" "start" "-a" "f4491f0490ea663f4172ed415cf569936b3082a751182f1e6a08ace0e0d91f0a", kill_on_drop: false }` [INFO] [stderr] Compiling zstd-safe v7.2.4 [INFO] [stderr] Compiling jobserver v0.1.33 [INFO] [stderr] Compiling miniz_oxide v0.8.8 [INFO] [stderr] Compiling clap_builder v4.5.37 [INFO] [stderr] Compiling buffer-redux v1.0.2 [INFO] [stderr] Compiling bytecount v0.6.8 [INFO] [stderr] Compiling clap_derive v4.5.32 [INFO] [stderr] Compiling roaring v0.10.12 [INFO] [stderr] Compiling cc v1.2.22 [INFO] [stderr] Compiling flate2 v1.1.1 [INFO] [stderr] Compiling zstd-sys v2.0.15+zstd.1.5.7 [INFO] [stderr] Compiling liblzma-sys v0.3.13 [INFO] [stderr] Compiling bzip2-sys v0.1.13+1.0.8 [INFO] [stderr] Compiling bzip2 v0.4.4 [INFO] [stderr] Compiling clap v4.5.37 [INFO] [stderr] Compiling liblzma v0.3.6 [INFO] [stderr] Compiling zstd v0.13.3 [INFO] [stderr] Compiling needletail v0.6.3 [INFO] [stderr] Compiling pairsnp-rs v0.2.1 (/opt/rustwide/workdir) [INFO] [stderr] Finished `dev` profile [unoptimized + debuginfo] target(s) in 32.24s [INFO] running `Command { std: "docker" "inspect" "f4491f0490ea663f4172ed415cf569936b3082a751182f1e6a08ace0e0d91f0a", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "f4491f0490ea663f4172ed415cf569936b3082a751182f1e6a08ace0e0d91f0a", kill_on_drop: false }` [INFO] [stdout] f4491f0490ea663f4172ed415cf569936b3082a751182f1e6a08ace0e0d91f0a [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-1-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-1-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:7ad1b28ee6f5f7f699f6cf7015098d6ccdd96d6f2d78dd06228f5b4c9faf309c" "/opt/rustwide/cargo-home/bin/cargo" "+cdb45c87e2cd43495379f7e867e3cc15dcee9f93" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] e43740968f706815291a10dab6d9e6380fc86ddeebaefae429a869a7f94faccd [INFO] running `Command { std: "docker" "start" "-a" "e43740968f706815291a10dab6d9e6380fc86ddeebaefae429a869a7f94faccd", kill_on_drop: false }` [INFO] [stderr] Compiling pairsnp-rs v0.2.1 (/opt/rustwide/workdir) [INFO] [stderr] Finished `test` profile [unoptimized + debuginfo] target(s) in 1.16s [INFO] running `Command { std: "docker" "inspect" "e43740968f706815291a10dab6d9e6380fc86ddeebaefae429a869a7f94faccd", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "e43740968f706815291a10dab6d9e6380fc86ddeebaefae429a869a7f94faccd", kill_on_drop: false }` [INFO] [stdout] e43740968f706815291a10dab6d9e6380fc86ddeebaefae429a869a7f94faccd [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-1-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-1-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:7ad1b28ee6f5f7f699f6cf7015098d6ccdd96d6f2d78dd06228f5b4c9faf309c" "/opt/rustwide/cargo-home/bin/cargo" "+cdb45c87e2cd43495379f7e867e3cc15dcee9f93" "test" "--frozen", kill_on_drop: false }` [INFO] [stdout] 07a52050e713630356e2eb83e9a2d88f8e2f86b2b02fe4c9a87926c39dfd28ea [INFO] running `Command { std: "docker" "start" "-a" "07a52050e713630356e2eb83e9a2d88f8e2f86b2b02fe4c9a87926c39dfd28ea", kill_on_drop: false }` [INFO] [stderr] Finished `test` profile [unoptimized + debuginfo] target(s) in 0.11s [INFO] [stderr] Running unittests src/main.rs (/opt/rustwide/target/debug/deps/pairsnp_rs-e992c3257b06c219) [INFO] [stdout] [INFO] [stdout] running 7 tests [INFO] [stdout] test tests::test_parallel_build_nucleotide_bitmaps ... ignored [INFO] [stdout] test tests::test_write_matrix_dense ... ok [INFO] [stdout] test tests::test_write_matrix_sparse ... ok [INFO] [stdout] test tests::test_write_matrix_with_indices ... ok [INFO] [stdout] test tests::test_calculate_pairwise_snp_distances ... ok [INFO] [stdout] test tests::test_build_nucleotide_bitmaps ... ok [INFO] [stdout] test tests::test_build_nucleotide_bitmaps_invalid_char - should panic ... ok [INFO] [stdout] [INFO] [stdout] test result: ok. 6 passed; 0 failed; 1 ignored; 0 measured; 0 filtered out; finished in 0.05s [INFO] [stdout] [INFO] running `Command { std: "docker" "inspect" "07a52050e713630356e2eb83e9a2d88f8e2f86b2b02fe4c9a87926c39dfd28ea", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "07a52050e713630356e2eb83e9a2d88f8e2f86b2b02fe4c9a87926c39dfd28ea", kill_on_drop: false }` [INFO] [stdout] 07a52050e713630356e2eb83e9a2d88f8e2f86b2b02fe4c9a87926c39dfd28ea