[INFO] fetching crate noodles-sam 0.79.0... [INFO] testing noodles-sam-0.79.0 against master#cdb45c87e2cd43495379f7e867e3cc15dcee9f93 for pr-145838-1 [INFO] extracting crate noodles-sam 0.79.0 into /workspace/builds/worker-0-tc1/source [INFO] started tweaking crates.io crate noodles-sam 0.79.0 [INFO] removed 0 missing examples [INFO] finished tweaking crates.io crate noodles-sam 0.79.0 [INFO] tweaked toml for crates.io crate noodles-sam 0.79.0 written to /workspace/builds/worker-0-tc1/source/Cargo.toml [INFO] validating manifest of crates.io crate noodles-sam 0.79.0 on toolchain cdb45c87e2cd43495379f7e867e3cc15dcee9f93 [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+cdb45c87e2cd43495379f7e867e3cc15dcee9f93" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] crate crates.io crate noodles-sam 0.79.0 already has a lockfile, it will not be regenerated [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+cdb45c87e2cd43495379f7e867e3cc15dcee9f93" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] Downloading crates ... [INFO] [stderr] Downloaded noodles-bgzf v0.43.0 [INFO] [stderr] Downloaded noodles-core v0.18.0 [INFO] [stderr] Downloaded noodles-csi v0.51.0 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-0-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-0-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:7ad1b28ee6f5f7f699f6cf7015098d6ccdd96d6f2d78dd06228f5b4c9faf309c" "/opt/rustwide/cargo-home/bin/cargo" "+cdb45c87e2cd43495379f7e867e3cc15dcee9f93" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] a9185039c2a38b8c228a1382cc3cba72eabb1e60ae88660ac40515efbfb840f7 [INFO] running `Command { std: "docker" "start" "-a" "a9185039c2a38b8c228a1382cc3cba72eabb1e60ae88660ac40515efbfb840f7", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "a9185039c2a38b8c228a1382cc3cba72eabb1e60ae88660ac40515efbfb840f7", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "a9185039c2a38b8c228a1382cc3cba72eabb1e60ae88660ac40515efbfb840f7", kill_on_drop: false }` [INFO] [stdout] a9185039c2a38b8c228a1382cc3cba72eabb1e60ae88660ac40515efbfb840f7 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-0-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-0-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:7ad1b28ee6f5f7f699f6cf7015098d6ccdd96d6f2d78dd06228f5b4c9faf309c" "/opt/rustwide/cargo-home/bin/cargo" "+cdb45c87e2cd43495379f7e867e3cc15dcee9f93" "build" "--frozen" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] 5807ba25deac2231de252d2486de0c3319e34f79f8bfd18d189bef235e2e610d [INFO] running `Command { std: "docker" "start" "-a" "5807ba25deac2231de252d2486de0c3319e34f79f8bfd18d189bef235e2e610d", kill_on_drop: false }` [INFO] [stderr] Compiling lexical-util v1.0.6 [INFO] [stderr] Compiling zlib-rs v0.5.1 [INFO] [stderr] Compiling bstr v1.12.0 [INFO] [stderr] Compiling bit-vec v0.8.0 [INFO] [stderr] Compiling noodles-core v0.18.0 [INFO] [stderr] Compiling lexical-parse-integer v1.0.5 [INFO] [stderr] Compiling lexical-write-integer v1.0.5 [INFO] [stderr] Compiling lexical-parse-float v1.0.5 [INFO] [stderr] Compiling lexical-write-float v1.0.5 [INFO] [stderr] Compiling lexical-core v1.0.5 [INFO] [stderr] Compiling libz-rs-sys v0.5.1 [INFO] [stderr] Compiling flate2 v1.1.2 [INFO] [stderr] Compiling noodles-bgzf v0.43.0 [INFO] [stderr] Compiling noodles-csi v0.51.0 [INFO] [stderr] Compiling noodles-sam v0.79.0 (/opt/rustwide/workdir) [INFO] [stderr] Finished `dev` profile [unoptimized + debuginfo] target(s) in 13.57s [INFO] running `Command { std: "docker" "inspect" "5807ba25deac2231de252d2486de0c3319e34f79f8bfd18d189bef235e2e610d", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "5807ba25deac2231de252d2486de0c3319e34f79f8bfd18d189bef235e2e610d", kill_on_drop: false }` [INFO] [stdout] 5807ba25deac2231de252d2486de0c3319e34f79f8bfd18d189bef235e2e610d [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-0-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-0-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:7ad1b28ee6f5f7f699f6cf7015098d6ccdd96d6f2d78dd06228f5b4c9faf309c" "/opt/rustwide/cargo-home/bin/cargo" "+cdb45c87e2cd43495379f7e867e3cc15dcee9f93" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] 1df3bb18499398b98fcc076a51930265dc0752339898b7f30b999cd3fd414046 [INFO] running `Command { std: "docker" "start" "-a" "1df3bb18499398b98fcc076a51930265dc0752339898b7f30b999cd3fd414046", kill_on_drop: false }` [INFO] [stderr] Compiling tokio v1.47.1 [INFO] [stderr] Compiling noodles-sam v0.79.0 (/opt/rustwide/workdir) [INFO] [stderr] Finished `test` profile [unoptimized + debuginfo] target(s) in 13.62s [INFO] running `Command { std: "docker" "inspect" "1df3bb18499398b98fcc076a51930265dc0752339898b7f30b999cd3fd414046", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "1df3bb18499398b98fcc076a51930265dc0752339898b7f30b999cd3fd414046", kill_on_drop: false }` [INFO] [stdout] 1df3bb18499398b98fcc076a51930265dc0752339898b7f30b999cd3fd414046 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-0-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-0-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:7ad1b28ee6f5f7f699f6cf7015098d6ccdd96d6f2d78dd06228f5b4c9faf309c" "/opt/rustwide/cargo-home/bin/cargo" "+cdb45c87e2cd43495379f7e867e3cc15dcee9f93" "test" "--frozen", kill_on_drop: false }` [INFO] [stdout] 179d1add5d2e2894ddc9da41c25ebf4570b9a55e2f0fd574b70bb98d4da136be [INFO] running `Command { std: "docker" "start" "-a" "179d1add5d2e2894ddc9da41c25ebf4570b9a55e2f0fd574b70bb98d4da136be", kill_on_drop: false }` [INFO] [stderr] Finished `test` profile [unoptimized + debuginfo] target(s) in 0.08s [INFO] [stderr] Running unittests src/lib.rs (/opt/rustwide/target/debug/deps/noodles_sam-a8fce6829fc85c04) [INFO] [stdout] [INFO] [stdout] running 187 tests [INFO] [stdout] test alignment::record::cigar::op::kind::tests::test_consumes_reference ... ok [INFO] [stdout] test alignment::record::cigar::iter::try_simplify::tests::test_next ... ok [INFO] [stdout] test alignment::record::cigar::op::kind::tests::test_consumes_read ... ok [INFO] [stdout] test alignment::record::cigar::tests::test_alignment_span ... ok [INFO] [stdout] test alignment::record::data::field::tag::tests::test_fmt_debug ... ok [INFO] [stdout] test alignment::record::flags::tests::test_contains ... ok [INFO] [stdout] test alignment::record::flags::tests::test_from_u16_for_flags ... ok [INFO] [stdout] test alignment::record::mapping_quality::tests::test_from_mapping_quality_for_u8 ... ok [INFO] [stdout] test alignment::record::sequence::tests::test_into_iter ... ok [INFO] [stdout] test alignment::record::mapping_quality::tests::test_try_from_u8_for_mapping_quality ... ok [INFO] [stdout] test alignment::record::cigar::tests::test_read_length ... ok [INFO] [stdout] test alignment::record::tests::test_alignment_end ... ok [INFO] [stdout] test alignment::record::quality_scores::tests::test_into_iter ... ok [INFO] [stdout] test alignment::record_buf::data::field::value::array::tests::test_subtype ... ok [INFO] [stdout] test alignment::record::flags::tests::test_default ... ok [INFO] [stdout] test alignment::record_buf::builder::tests::test_default ... ok [INFO] [stdout] test alignment::record::flags::tests::test_from_flags_for_u16 ... ok [INFO] [stdout] test alignment::record::cigar::tests::test_into_iter ... ok [INFO] [stdout] test alignment::record_buf::data::field::value::tests::test_from_i16_for_value ... ok [INFO] [stdout] test alignment::record_buf::data::field::value::tests::test_from_i32_for_value ... ok [INFO] [stdout] test alignment::record_buf::data::field::value::tests::test_from_u32_for_value ... ok [INFO] [stdout] test alignment::record_buf::data::field::value::tests::test_from_vec_f32_for_value ... ok [INFO] [stdout] test alignment::record_buf::data::field::value::tests::test_from_vec_i16_for_value ... ok [INFO] [stdout] test alignment::record_buf::data::field::value::tests::test_from_vec_i32_for_value ... ok [INFO] [stdout] test alignment::record_buf::data::field::value::tests::test_from_vec_u16_for_value ... ok [INFO] [stdout] test alignment::record_buf::data::field::value::tests::test_from_vec_i8_for_value ... ok [INFO] [stdout] test alignment::record_buf::data::field::value::tests::test_try_from_i64_for_value ... ok [INFO] [stdout] test alignment::record_buf::data::field::value::tests::test_ty ... ok [INFO] [stdout] test alignment::record_buf::data::field::value::tests::test_from_f32_for_value ... ok [INFO] [stdout] test alignment::record_buf::data::field::value::tests::test_from_vec_u8_for_value ... ok [INFO] [stdout] test fs::index::tests::test_is_coordinate_sorted ... ok [INFO] [stdout] test header::builder::tests::test_default ... ok [INFO] [stdout] test header::builder::tests::test_build ... ok [INFO] [stdout] test header::parser::record::kind::tests::test_parse_kind ... ok [INFO] [stdout] test header::parser::record::tests::test_consume_prefix ... ok [INFO] [stdout] test header::parser::record::value::comment::tests::test_parse_comment ... ok [INFO] [stdout] test header::parser::record::value::map::field::value::tests::test_parse_value ... ok [INFO] [stdout] test header::parser::record::value::map::header::tests::test_parse_header ... ok [INFO] [stdout] test header::parser::record::value::map::header::tests::test_parse_header_with_missing_version ... ok [INFO] [stdout] test header::parser::record::value::map::header::version::tests::test_parse_version ... ok [INFO] [stdout] test alignment::record_buf::data::field::value::tests::test_from_i8_for_value ... ok [INFO] [stdout] test alignment::record_buf::data::field::value::tests::test_from_u16_for_value ... ok [INFO] [stdout] test alignment::record_buf::data::field::value::tests::test_from_u8_for_value ... ok [INFO] [stdout] test alignment::record_buf::data::field::value::tests::test_from_vec_u32_for_value ... ok [INFO] [stdout] test alignment::record_buf::data::tests::test_remove_with_multiple_removes ... ok [INFO] [stdout] test header::parser::record::value::map::field::tag::tests::test_parse_tag ... ok [INFO] [stdout] test header::parser::record::value::map::read_group::tests::test_parse_read_group ... ok [INFO] [stdout] test header::parser::record::value::map::reference_sequence::length::tests::test_parse_length ... ok [INFO] [stdout] test header::parser::record::value::map::reference_sequence::tests::test_parse_header ... ok [INFO] [stdout] test header::parser::record::value::map::program::tests::test_parse_program ... ok [INFO] [stdout] test header::parser::record::value::map::read_group::tests::test_parse_read_group_with_missing_id ... ok [INFO] [stdout] test header::parser::record::value::map::program::tests::test_parse_program_with_missing_id ... ok [INFO] [stdout] test header::parser::record::value::map::reference_sequence::tests::test_parse_header_with_invalid_length ... ok [INFO] [stdout] test header::parser::record::value::map::reference_sequence::tests::test_parse_header_with_missing_name ... ok [INFO] [stdout] test header::parser::record::value::map::reference_sequence::tests::test_parse_header_with_missing_length ... ok [INFO] [stdout] test header::parser::tests::test_parse_with_duplicate_program_ids ... ok [INFO] [stdout] test header::parser::tests::test_parse_with_duplicate_read_group_ids ... ok [INFO] [stdout] test header::parser::tests::test_extract_version ... ok [INFO] [stdout] test header::parser::tests::test_parse_with_multiple_hd ... ok [INFO] [stdout] test header::parser::tests::test_parse_without_hd ... ok [INFO] [stdout] test header::parser::tests::test_parse ... ok [INFO] [stdout] test header::parser::tests::test_parse_with_duplicate_reference_sequence_names ... ok [INFO] [stdout] test header::parser::tests::test_parse_with_empty_input ... ok [INFO] [stdout] test header::programs::tests::test_add ... ok [INFO] [stdout] test header::programs::tests::test_leaves ... ok [INFO] [stdout] test header::record::value::map::header::tag::tests::test_try_from_u8_array_for_standard ... ok [INFO] [stdout] test header::programs::tests::test_leaves_with_cycle ... ok [INFO] [stdout] test header::record::kind::tests::test_from_str ... ok [INFO] [stdout] test header::record::value::map::header::builder::tests::test_default ... ok [INFO] [stdout] test header::record::value::map::header::tag::tests::test_from_standard_for_u8_2_array ... ok [INFO] [stdout] test header::record::value::map::header::tests::test_default ... ok [INFO] [stdout] test header::record::value::map::header::version::tests::test_default ... ok [INFO] [stdout] test header::record::value::map::program::tag::tests::test_try_from_u8_array_for_standard ... ok [INFO] [stdout] test header::record::value::map::read_group::tag::tests::test_as_ref_u8_2_array_for_standard ... ok [INFO] [stdout] test header::record::value::map::read_group::tag::tests::test_from_standard_for_u8_2_array ... ok [INFO] [stdout] test header::record::value::map::header::version::tests::test_from_str ... ok [INFO] [stdout] test header::record::value::map::program::tag::tests::test_as_ref_u8_2_array_for_standard ... ok [INFO] [stdout] test header::record::value::map::read_group::tag::tests::test_try_from_u8_array_for_standard ... ok [INFO] [stdout] test header::record::value::map::header::tag::tests::test_as_ref_u8_2_array_for_standard ... ok [INFO] [stdout] test header::record::value::map::reference_sequence::builder::tests::test_default ... ok [INFO] [stdout] test header::record::value::map::reference_sequence::md5_checksum::tests::test_fmt ... ok [INFO] [stdout] test header::record::value::map::program::tag::tests::test_from_standard_for_u8_2_array ... ok [INFO] [stdout] test header::record::value::map::reference_sequence::tag::tests::test_as_ref_u8_2_array_for_standard ... ok [INFO] [stdout] test header::record::value::map::reference_sequence::tag::tests::test_from_standard_for_u8_2_array ... ok [INFO] [stdout] test header::record::value::map::reference_sequence::md5_checksum::tests::test_parse ... ok [INFO] [stdout] test header::record::value::map::tag::other::tests::test_fmt_debug ... ok [INFO] [stdout] test header::record::value::map::reference_sequence::md5_checksum::tests::test_from_u8_array_for_md5_checksum ... ok [INFO] [stdout] test header::record::value::map::reference_sequence::md5_checksum::tests::test_from_md5_checksum_for_u8_array ... ok [INFO] [stdout] test header::record::value::map::reference_sequence::tag::tests::test_from_str ... ok [INFO] [stdout] test header::record::value::map::tag::tests::test_from_str_for_tag ... ok [INFO] [stdout] test io::indexed_reader::builder::tests::test_build_index_src ... ok [INFO] [stdout] test io::reader::header::tests::test_read_header_with_no_header ... ok [INFO] [stdout] test io::reader::header::tests::test_read_header_with_no_records ... ok [INFO] [stdout] test io::reader::header::tests::test_read_header_with_multiple_buffer_fills ... ok [INFO] [stdout] test io::reader::record_buf::cigar::op::tests::test_parse_op ... ok [INFO] [stdout] test io::reader::record_buf::cigar::tests::test_parse_cigar ... ok [INFO] [stdout] test io::reader::record_buf::data::field::tests::test_parse_field ... ok [INFO] [stdout] test io::reader::record_buf::data::field::ty::tests::test_parse_type ... ok [INFO] [stdout] test io::reader::record::tests::test_read_record ... ok [INFO] [stdout] test io::reader::record_buf::data::field::value::array::subtype::tests::test_parse_subtype ... ok [INFO] [stdout] test io::reader::record_buf::data::field::tag::tests::test_parse_tag ... ok [INFO] [stdout] test io::reader::record_buf::data::field::value::tests::test_get_value ... ok [INFO] [stdout] test io::reader::record_buf::cigar::op::kind::tests::test_parse_kind ... ok [INFO] [stdout] test io::reader::record_buf::data::tests::test_parse_data ... ok [INFO] [stdout] test io::reader::record_buf::flags::tests::test_parse_flags ... ok [INFO] [stdout] test io::reader::record_buf::data::field::value::array::tests::test_parse_array ... ok [INFO] [stdout] test io::reader::record_buf::mapping_quality::tests::test_mapping_quality ... ok [INFO] [stdout] test io::reader::record_buf::quality_scores::tests::test_parse_quality_scores ... ok [INFO] [stdout] test io::reader::record_buf::position::tests::test_parse_alignment_start ... ok [INFO] [stdout] test io::reader::record_buf::reference_sequence_id::tests::test_parse_reference_sequence_id ... ok [INFO] [stdout] test io::reader::tests::test_read_line ... ok [INFO] [stdout] test io::writer::header::record::kind::tests::test_write_kind ... ok [INFO] [stdout] test io::writer::header::record::value::map::header::version::tests::test_write_version_field ... ok [INFO] [stdout] test io::writer::header::record::value::map::reference_sequence::name::tests::test_is_valid_name ... ok [INFO] [stdout] test io::writer::header::record::value::map::tag::tests::test_is_valid ... ok [INFO] [stdout] test io::writer::header::record::value::map::tag::tests::test_write_tag ... ok [INFO] [stdout] test io::writer::header::record::value::map::tests::test_is_valid_value ... ok [INFO] [stdout] test io::writer::header::tests::test_write_header ... ok [INFO] [stdout] test io::writer::record::cigar::op::kind::tests::test_encode ... ok [INFO] [stdout] test io::reader::record_buf::sequence::tests::test_parse_sequence ... ok [INFO] [stdout] test io::reader::record_buf::template_length::tests::test_parse_template_length ... ok [INFO] [stdout] test io::writer::record::cigar::op::tests::test_write_op ... ok [INFO] [stdout] test io::writer::header::record::value::map::reference_sequence::length::tests::test_write_length_field ... ok [INFO] [stdout] test io::writer::record::cigar::op::kind::tests::test_write_kind ... ok [INFO] [stdout] test io::reader::record_buf::tests::test_parse_with_data ... ok [INFO] [stdout] test io::writer::record::data::field::tag::tests::test_is_valid ... ok [INFO] [stdout] test io::writer::record::data::field::tag::tests::test_put_tag ... ok [INFO] [stdout] test io::reader::record_buf::tests::test_parse_mate_reference_sequence_id ... ok [INFO] [stdout] test io::writer::record::cigar::tests::test_write_cigar ... ok [INFO] [stdout] test io::writer::record::data::field::tests::test_write_field ... ok [INFO] [stdout] test io::writer::record::data::field::ty::tests::test_write_type ... ok [INFO] [stdout] test io::writer::record::data::field::value::array::subtype::tests::test_write_subtype ... ok [INFO] [stdout] test io::reader::record_buf::name::tests::test_parse_name ... ok [INFO] [stdout] test io::writer::record::data::field::value::float::tests::test_is_valid ... ok [INFO] [stdout] test io::writer::record::data::field::value::character::tests::test_is_valid_character ... ok [INFO] [stdout] test io::writer::record::data::field::value::float::tests::test_write_float ... ok [INFO] [stdout] test io::writer::record::data::field::value::hex::tests::test_write_hex ... ok [INFO] [stdout] test io::writer::record::data::field::value::hex::tests::test_is_valid ... ok [INFO] [stdout] test io::writer::record::data::field::value::string::tests::test_write_string ... ok [INFO] [stdout] test io::writer::record::data::field::value::string::tests::test_is_valid ... ok [INFO] [stdout] test io::writer::record::data::field::value::tests::test_write_value ... ok [INFO] [stdout] test io::writer::record::mapping_quality::tests::test_write_mapping_quality ... ok [INFO] [stdout] test io::writer::record::data::field::ty::tests::test_encode ... ok [INFO] [stdout] test io::writer::record::data::field::value::character::tests::test_write_character ... ok [INFO] [stdout] test io::writer::record::data::field::value::array::tests::test_write_array ... ok [INFO] [stdout] test io::writer::record::data::tests::test_write_data ... ok [INFO] [stdout] test io::writer::record::flags::tests::test_write_flags ... ok [INFO] [stdout] test io::writer::record::reference_sequence_name::tests::test_write_mate_reference_sequence_name ... ok [INFO] [stdout] test io::writer::record::sequence::tests::test_is_valid_base ... ok [INFO] [stdout] test io::writer::record::sequence::tests::test_write_sequence ... ok [INFO] [stdout] test io::writer::record::tests::test_write_record_with_data ... ok [INFO] [stdout] test record::cigar::tests::test_len ... ok [INFO] [stdout] test record::data::field::tag::tests::test_parse_tag ... ok [INFO] [stdout] test record::data::field::tests::test_parse_field ... ok [INFO] [stdout] test record::data::field::ty::tests::test_parse_type ... ok [INFO] [stdout] test record::data::field::value::array::subtype::tests::test_parse_subtype ... ok [INFO] [stdout] test record::data::field::value::array::tests::test_parse_array ... ok [INFO] [stdout] test record::data::field::value::array::values::tests::test_iter ... ok [INFO] [stdout] test record::data::field::value::array::values::tests::test_len ... ok [INFO] [stdout] test record::data::field::value::base_modifications::group::modification::tests::test_try_from_u8_for_modification ... ok [INFO] [stdout] test record::data::field::value::base_modifications::group::status::tests::test_default ... ok [INFO] [stdout] test io::writer::record::name::tests::test_write_name ... ok [INFO] [stdout] test io::writer::record::name::tests::test_write_name_with_invalid_name ... ok [INFO] [stdout] test record::data::field::value::base_modifications::group::unmodified_base::tests::test_complement ... ok [INFO] [stdout] test io::writer::record::position::tests::test_write_position ... ok [INFO] [stdout] test io::writer::record::quality_scores::tests::test_write_quality_scores ... ok [INFO] [stdout] test record::data::field::value::base_modifications::group::unmodified_base::tests::test_try_from_u8_for_unmodified_base ... ok [INFO] [stdout] test io::writer::record::reference_sequence_name::tests::test_write_reference_sequence_name ... ok [INFO] [stdout] test io::writer::record::template_length::tests::test_write_template_length ... ok [INFO] [stdout] test record::data::field::value::base_modifications::parser::group::strand::tests::test_parse_strand ... ok [INFO] [stdout] test record::data::field::value::base_modifications::group::strand::tests::test_try_from_u8_for_strand ... ok [INFO] [stdout] test record::data::field::value::base_modifications::parser::group::tests::test_consume_terminator ... ok [INFO] [stdout] test record::data::field::value::base_modifications::parser::group::modifications::tests::test_parse_modifications ... ok [INFO] [stdout] test record::data::field::value::base_modifications::parser::group::tests::test_parse_group ... ok [INFO] [stdout] test record::data::field::value::base_modifications::parser::group::status::tests::test_parse_status ... ok [INFO] [stdout] test record::data::field::value::base_modifications::group::unmodified_base::tests::test_from_unmodified_base_for_u8 ... ok [INFO] [stdout] test record::data::field::value::base_modifications::parser::group::unmodified_base::tests::test_parse_unmodified_base ... ok [INFO] [stdout] test record::data::field::value::tests::test_parse_value ... ok [INFO] [stdout] test record::data::tests::test_get ... ok [INFO] [stdout] test record::data::tests::test_is_empty ... ok [INFO] [stdout] test record::data::field::value::integer::tests::test_parse_integer_value ... ok [INFO] [stdout] test record::data::field::value::base_modifications::parser::tests::test_parse ... ok [INFO] [stdout] test record::sequence::tests::test_crate_alignment_record_sequence_iter ... ok [INFO] [stdout] test record::data::tests::test_iter ... ok [INFO] [stdout] test record::quality_scores::tests::test_iter ... ok [INFO] [stdout] test record::fields::bounds::tests::test_ranges ... ok [INFO] [stderr] Doc-tests noodles_sam [INFO] [stdout] test header::record::value::map::header::version::tests::test_fmt ... ok [INFO] [stdout] [INFO] [stdout] test result: ok. 187 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.06s [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] running 181 tests [INFO] [stdout] test src/alignment/record/cigar/op.rs - alignment::record::cigar::op::Op::kind (line 35) ... ok [INFO] [stdout] test src/alignment/record/cigar/op/kind.rs - alignment::record::cigar::op::kind::Kind::consumes_read (line 31) ... ok [INFO] [stdout] test src/alignment/record/cigar/op.rs - alignment::record::cigar::op::Op::is_empty (line 63) ... ok [INFO] [stdout] test src/alignment/record/cigar/op/kind.rs - alignment::record::cigar::op::kind::Kind::consumes_reference (line 52) ... ok [INFO] [stdout] test src/alignment/record/cigar/op.rs - alignment::record::cigar::op::Op::len (line 48) ... ok [INFO] [stdout] test src/alignment/record/flags.rs - alignment::record::flags::Flags::is_last_segment (line 128) ... ok [INFO] [stdout] test src/alignment/record/flags.rs - alignment::record::flags::Flags::is_duplicate (line 167) ... ok [INFO] [stdout] test src/alignment/record/cigar/op.rs - alignment::record::cigar::op::Op::new (line 19) ... ok [INFO] [stdout] test src/alignment/record/data/field/value.rs - alignment::record::data::field::value::Value<'_>::ty (line 44) ... ok [INFO] [stdout] test src/alignment/record/data/field/value.rs - alignment::record::data::field::value::Value<'_>::as_int (line 71) ... ok [INFO] [stdout] test src/alignment/record/data/field/tag.rs - alignment::record::data::field::tag::Tag::new (line 208) ... ok [INFO] [stdout] test src/alignment/record/flags.rs - alignment::record::flags::Flags::is_first_segment (line 115) ... ok [INFO] [stdout] test src/alignment/record/flags.rs - alignment::record::flags::Flags::is_mate_reverse_complemented (line 102) ... ok [INFO] [stdout] test src/alignment/record/flags.rs - alignment::record::flags::Flags::is_segmented (line 37) ... ok [INFO] [stdout] test src/alignment/record/mapping_quality.rs - alignment::record::mapping_quality::MappingQuality::get (line 40) ... ok [INFO] [stdout] test src/alignment/record/mapping_quality.rs - alignment::record::mapping_quality::MappingQuality::new (line 27) ... ok [INFO] [stdout] test src/alignment/record/flags.rs - alignment::record::flags::Flags::is_properly_segmented (line 50) ... ok [INFO] [stdout] test src/alignment/record/flags.rs - alignment::record::flags::Flags::is_reverse_complemented (line 89) ... ok [INFO] [stdout] test src/alignment/record/flags.rs - alignment::record::flags::Flags::is_secondary (line 141) ... ok [INFO] [stdout] test src/alignment/record/flags.rs - alignment::record::flags::Flags::is_qc_fail (line 154) ... ok [INFO] [stdout] test src/alignment/record_buf.rs - alignment::record_buf::RecordBuf::alignment_end (line 484) ... ok [INFO] [stdout] test src/alignment/record/flags.rs - alignment::record::flags::Flags::is_mate_unmapped (line 76) ... ok [INFO] [stdout] test src/alignment/record_buf.rs - alignment::record_buf::RecordBuf::alignment_start (line 150) ... ok [INFO] [stdout] test src/alignment/record/flags.rs - alignment::record::flags::Flags::is_unmapped (line 63) ... ok [INFO] [stdout] test src/alignment/record_buf.rs - alignment::record_buf::RecordBuf::alignment_start_mut (line 165) ... ok [INFO] [stdout] test src/alignment/record/flags.rs - alignment::record::flags::Flags::is_supplementary (line 180) ... ok [INFO] [stdout] test src/alignment/record_buf.rs - alignment::record_buf::RecordBuf::builder (line 52) ... ok [INFO] [stdout] test src/alignment/record_buf.rs - alignment::record_buf::RecordBuf::alignment_span (line 468) ... ok [INFO] [stdout] test src/alignment/record_buf.rs - alignment::record_buf::RecordBuf::cigar_mut (line 220) ... ok [INFO] [stdout] test src/alignment/record_buf.rs - alignment::record_buf::RecordBuf::data (line 392) ... ok [INFO] [stdout] test src/alignment/record_buf.rs - alignment::record_buf::RecordBuf::flags_mut (line 107) ... ok [INFO] [stdout] test src/alignment/record_buf.rs - alignment::record_buf::RecordBuf::data_mut (line 405) ... ok [INFO] [stdout] test src/alignment/record_buf.rs - alignment::record_buf::RecordBuf::cigar (line 207) ... ok [INFO] [stdout] test src/alignment/record_buf.rs - alignment::record_buf::RecordBuf::flags (line 94) ... ok [INFO] [stdout] test src/alignment/record_buf.rs - alignment::record_buf::RecordBuf::mate_alignment_start (line 273) ... ok [INFO] [stdout] test src/alignment/record_buf.rs - alignment::record_buf::RecordBuf::mapping_quality (line 180) ... ok [INFO] [stdout] test src/alignment/record_buf.rs - alignment::record_buf::RecordBuf::mapping_quality_mut (line 193) ... ok [INFO] [stdout] test src/alignment/record_buf.rs - alignment::record_buf::RecordBuf::quality_scores (line 361) ... ok [INFO] [stdout] test src/alignment/record_buf.rs - alignment::record_buf::RecordBuf::mate_alignment_start_mut (line 288) ... ok [INFO] [stdout] test src/alignment/record_buf.rs - alignment::record_buf::RecordBuf::mate_reference_sequence_id_mut (line 257) ... ok [INFO] [stdout] test src/alignment/record_buf.rs - alignment::record_buf::RecordBuf::reference_sequence (line 431) ... ok [INFO] [stdout] test src/alignment/record_buf.rs - alignment::record_buf::RecordBuf::quality_scores_mut (line 374) ... ok [INFO] [stdout] test src/alignment/record_buf.rs - alignment::record_buf::RecordBuf::mate_reference_sequence (line 448) ... ok [INFO] [stdout] test src/alignment/record_buf.rs - alignment::record_buf::RecordBuf::name (line 64) ... ok [INFO] [stdout] test src/alignment/record_buf.rs - alignment::record_buf::RecordBuf::reference_sequence_id (line 121) ... ok [INFO] [stdout] test src/alignment/record_buf.rs - alignment::record_buf::RecordBuf::sequence_mut (line 343) ... ok [INFO] [stdout] test src/alignment/record_buf.rs - alignment::record_buf::RecordBuf::template_length_mut (line 316) ... ok [INFO] [stdout] test src/alignment/record_buf.rs - alignment::record_buf::RecordBuf::sequence (line 330) ... ok [INFO] [stdout] test src/alignment/record_buf.rs - alignment::record_buf::RecordBuf::template_length (line 303) ... ok [INFO] [stdout] test src/alignment/record_buf.rs - alignment::record_buf::RecordBuf::reference_sequence_id_mut (line 134) ... ok [INFO] [stdout] test src/alignment/record_buf.rs - alignment::record_buf::RecordBuf::mate_reference_sequence_id (line 244) ... ok [INFO] [stdout] test src/alignment/record_buf.rs - alignment::record_buf::RecordBuf::name_mut (line 77) ... ok [INFO] [stdout] test src/alignment/record_buf/builder.rs - alignment::record_buf::builder::Builder::set_alignment_start (line 86) ... ok [INFO] [stdout] test src/alignment/record_buf/builder.rs - alignment::record_buf::builder::Builder::build (line 272) ... ok [INFO] [stdout] test src/alignment/record_buf/builder.rs - alignment::record_buf::builder::Builder::set_quality_scores (line 224) ... ok [INFO] [stdout] test src/alignment/record_buf/builder.rs - alignment::record_buf::builder::Builder::set_mapping_quality (line 105) ... ok [INFO] [stdout] test src/alignment/record_buf/builder.rs - alignment::record_buf::builder::Builder::set_cigar (line 123) ... ok [INFO] [stdout] test src/alignment/record_buf/builder.rs - alignment::record_buf::builder::Builder::set_data (line 244) ... ok [INFO] [stdout] test src/alignment/record_buf/builder.rs - alignment::record_buf::builder::Builder::set_mate_alignment_start (line 167) ... ok [INFO] [stdout] test src/alignment/record_buf/builder.rs - alignment::record_buf::builder::Builder::set_reference_sequence_id (line 68) ... ok [INFO] [stdout] test src/alignment/record_buf/builder.rs - alignment::record_buf::builder::Builder::set_name (line 28) ... ok [INFO] [stdout] test src/alignment/record_buf/builder.rs - alignment::record_buf::builder::Builder::set_mate_reference_sequence_id (line 149) ... ok [INFO] [stdout] test src/alignment/record_buf/data.rs - alignment::record_buf::data::Data::clear (line 47) ... ok [INFO] [stdout] test src/alignment/record_buf/builder.rs - alignment::record_buf::builder::Builder::set_flags (line 50) ... ok [INFO] [stdout] test src/alignment/record_buf/cigar.rs - alignment::record_buf::cigar::Cigar::alignment_span (line 20) ... ok [INFO] [stdout] test src/alignment/record_buf/data.rs - alignment::record_buf::data::Data::get (line 67) ... ok [INFO] [stdout] test src/alignment/record_buf/data.rs - alignment::record_buf::data::Data::insert (line 213) ... ok [INFO] [stdout] test src/alignment/record_buf/data.rs - alignment::record_buf::data::Data::iter (line 145) ... ok [INFO] [stdout] test src/alignment/record_buf/data.rs - alignment::record_buf::data::Data::is_empty (line 32) ... ok [INFO] [stdout] test src/alignment/record_buf/data.rs - alignment::record_buf::data::Data::keys (line 166) ... ok [INFO] [stdout] test src/alignment/record_buf/convert.rs - alignment::record_buf::convert::RecordBuf::try_from_alignment_record (line 11) ... ok [INFO] [stdout] test src/alignment/record_buf/cigar.rs - alignment::record_buf::cigar::Cigar::read_length (line 51) ... ok [INFO] [stdout] test src/alignment/record_buf/data.rs - alignment::record_buf::data::Data::values (line 187) ... ok [INFO] [stdout] test src/alignment/record_buf/builder.rs - alignment::record_buf::builder::Builder::set_template_length (line 186) ... ok [INFO] [stdout] test src/alignment/record_buf/builder.rs - alignment::record_buf::builder::Builder::set_sequence (line 204) ... ok [INFO] [stdout] test src/alignment/record_buf/data.rs - alignment::record_buf::data::Data::get_mut (line 93) ... ok [INFO] [stdout] test src/alignment/record_buf/data.rs - alignment::record_buf::data::Data::get_index_of (line 122) ... ok [INFO] [stdout] test src/alignment/record_buf/data.rs - alignment::record_buf::data::Data::remove (line 243) ... ok [INFO] [stdout] test src/alignment/record_buf/data.rs - alignment::record_buf::data::Data::len (line 19) ... ok [INFO] [stdout] test src/fs/index.rs - fs::index::index (line 26) - compile ... ok [INFO] [stdout] test src/alignment/record_buf/data/field/value/array.rs - alignment::record_buf::data::field::value::array::Array::subtype (line 31) ... ok [INFO] [stdout] test src/alignment/record_buf/data/field/value.rs - alignment::record_buf::data::field::value::Value::is_int (line 90) ... ok [INFO] [stdout] test src/header.rs - header (line 45) ... ok [INFO] [stdout] test src/header.rs - header::Header::add_comment (line 351) ... ok [INFO] [stdout] test src/alignment/record_buf/data/field/value.rs - alignment::record_buf::data::field::value::Value::as_int (line 69) ... ok [INFO] [stdout] test src/header.rs - header::Header::builder (line 119) ... ok [INFO] [stdout] test src/header.rs - header::Header::header_mut (line 154) ... ok [INFO] [stdout] test src/header.rs - header (line 24) ... ok [INFO] [stdout] test src/header.rs - header::Header::header (line 131) ... ok [INFO] [stdout] test src/header.rs - header::Header::programs (line 278) ... ok [INFO] [stdout] test src/header.rs - header::Header::programs_mut (line 296) ... ok [INFO] [stdout] test src/header.rs - header::Header::clear (line 390) ... ok [INFO] [stdout] test src/header.rs - header::Header::read_groups (line 232) ... ok [INFO] [stdout] test src/header.rs - header::Header::from_str (line 415) ... ok [INFO] [stdout] test src/header.rs - header::Header::reference_sequences (line 174) ... ok [INFO] [stdout] test src/header.rs - header::Header::comments_mut (line 336) ... ok [INFO] [stdout] test src/header.rs - header::Header::reference_sequences_mut (line 204) ... ok [INFO] [stdout] test src/header/builder.rs - header::builder::Builder::add_comment (line 165) ... ok [INFO] [stdout] test src/header.rs - header::Header::comments (line 319) ... ok [INFO] [stdout] test src/alignment/record_buf/data/field/value.rs - alignment::record_buf::data::field::value::Value::ty (line 42) ... ok [INFO] [stdout] test src/header/builder.rs - header::builder::Builder::add_program (line 142) ... ok [INFO] [stdout] test src/header/builder.rs - header::builder::Builder::add_read_group (line 116) ... ok [INFO] [stdout] test src/header/builder.rs - header::builder::Builder::set_reference_sequences (line 44) ... ok [INFO] [stdout] test src/header/builder.rs - header::builder::Builder::add_reference_sequence (line 78) ... ok [INFO] [stdout] test src/header.rs - header::Header::read_groups_mut (line 254) ... ok [INFO] [stdout] test src/header/builder.rs - header::builder::Builder::set_header (line 26) ... ok [INFO] [stdout] test src/header/parser.rs - header::parser::Parser::parse_partial (line 84) ... ok [INFO] [stdout] test src/header/parser.rs - header::parser::Parser::finish (line 135) ... ok [INFO] [stdout] test src/header/builder.rs - header::builder::Builder::build (line 184) ... ok [INFO] [stdout] test src/header.rs - header::Header::is_empty (line 369) ... ok [INFO] [stdout] test src/header/record/value/map.rs - header::record::value::map::Map::other_fields_mut (line 57) ... ok [INFO] [stdout] test src/header/record/value/map/builder.rs - header::record::value::map::builder::Builder::build (line 81) ... ok [INFO] [stdout] test src/header/record/value/map/builder.rs - header::record::value::map::builder::Builder::insert (line 55) ... ok [INFO] [stdout] test src/header/programs.rs - header::programs::Programs::roots (line 117) ... ok [INFO] [stdout] test src/header/parser.rs - header::parser::parse (line 191) ... ok [INFO] [stdout] test src/header/programs.rs - header::programs::Programs::leaves (line 153) ... ok [INFO] [stdout] test src/header/programs.rs - header::programs::Programs::add (line 51) ... ok [INFO] [stdout] test src/header/record/value/map/header.rs - header::record::value::map::header::Map
::version_mut (line 68) ... ok [INFO] [stdout] test src/header/record/value/map/header.rs - header::record::value::map::header::Map
::new (line 32) ... ok [INFO] [stdout] test src/header/record/value/map/header/version.rs - header::record::value::map::header::version::Version::major (line 34) ... ok [INFO] [stdout] test src/header/record/value/map/header/builder.rs - header::record::value::map::header::builder::map::Builder
::set_version (line 15) ... ok [INFO] [stdout] test src/header/record/value/map/header/version.rs - header::record::value::map::header::version::Version::minor (line 47) ... ok [INFO] [stdout] test src/io/indexed_reader/builder.rs - io::indexed_reader::builder::Builder::build_from_path (line 42) - compile ... ok [INFO] [stdout] test src/header/record/value/map/header/version.rs - header::record::value::map::header::version::Version::new (line 22) ... ok [INFO] [stdout] test src/header/record/value/map/reference_sequence.rs - header::record::value::map::reference_sequence::Map::length_mut (line 69) ... ok [INFO] [stdout] test src/io/reader.rs - io::reader::Reader (line 35) - compile ... ok [INFO] [stdout] test src/io/indexed_reader/builder.rs - io::indexed_reader::builder::Builder::build_from_reader (line 67) ... ok [INFO] [stdout] test src/header/record/value/map/reference_sequence.rs - header::record::value::map::reference_sequence::Map::new (line 37) ... ok [INFO] [stdout] test src/io/indexed_reader/builder.rs - io::indexed_reader::builder::Builder::set_index (line 23) ... ok [INFO] [stdout] test src/io/reader.rs - io::reader::Reader::into_inner (line 86) ... ok [INFO] [stdout] test src/io/reader.rs - io::reader::Reader::query (line 330) - compile ... ok [INFO] [stdout] test src/io/reader.rs - io::reader::Reader::query_unmapped (line 375) - compile ... ok [INFO] [stdout] test src/io/reader.rs - io::reader::Reader::get_mut (line 72) ... ok [INFO] [stdout] test src/io/reader.rs - io::reader::Reader::get_ref (line 58) ... ok [INFO] [stdout] test src/header/record/value/map/header.rs - header::record::value::map::header::Map
::version (line 51) ... ok [INFO] [stdout] test src/header/record/value/map/reference_sequence.rs - header::record::value::map::reference_sequence::Map::length (line 54) ... ok [INFO] [stdout] test src/io/reader.rs - io::reader::Reader::header_reader (line 127) ... ok [INFO] [stdout] test src/io/reader.rs - io::reader::Reader::new (line 105) ... ok [INFO] [stdout] test src/header/record/value/map/reference_sequence/builder.rs - header::record::value::map::reference_sequence::builder::map::Builder::set_length (line 19) ... ok [INFO] [stdout] test src/io/reader.rs - io::reader::Reader::read_record (line 256) ... ok [INFO] [stdout] test src/io/reader.rs - io::reader::Reader::read_record_buf (line 193) ... ok [INFO] [stdout] test src/io/reader/builder.rs - io::reader::builder::Builder::build_from_path (line 39) - compile ... ok [INFO] [stdout] test src/io/reader/builder.rs - io::reader::builder::Builder::build_from_reader (line 66) ... ok [INFO] [stdout] test src/io/reader/builder.rs - io::reader::builder::Builder::set_compression_method (line 23) ... ok [INFO] [stdout] test src/io/reader.rs - io::reader::Reader::record_bufs (line 224) ... ok [INFO] [stdout] test src/io/writer.rs - io::writer::Writer (line 26) ... ok [INFO] [stdout] test src/io/reader.rs - io::reader::Reader::read_header (line 156) ... ok [INFO] [stdout] test src/io/writer.rs - io::writer::Writer::new (line 60) ... ok [INFO] [stdout] test src/io/writer/builder.rs - io::writer::builder::Builder::build_from_path (line 38) - compile ... ok [INFO] [stdout] test src/io/writer/builder.rs - io::writer::builder::Builder::set_compression_method (line 23) ... ok [INFO] [stdout] test src/io/reader.rs - io::reader::Reader::records (line 282) ... ok [INFO] [stdout] test src/lib.rs - (line 18) - compile ... ok [INFO] [stdout] test src/io/writer.rs - io::writer::Writer::write_record (line 131) ... ok [INFO] [stdout] test src/io/writer.rs - io::writer::Writer::get_mut (line 85) ... ok [INFO] [stdout] test src/io/writer/record/cigar.rs - io::writer::record::cigar::write_cigar (line 12) ... ok [INFO] [stdout] test src/io/writer.rs - io::writer::Writer::get_ref (line 72) ... ok [INFO] [stdout] test src/io/writer.rs - io::writer::Writer::write_header (line 114) ... ok [INFO] [stdout] test src/io/writer/builder.rs - io::writer::builder::Builder::build_from_writer (line 66) ... ok [INFO] [stdout] test src/record.rs - record::Record::flags (line 52) ... ok [INFO] [stdout] test src/record.rs - record::Record::alignment_start (line 95) ... ok [INFO] [stdout] test src/record.rs - record::Record::data (line 222) ... ok [INFO] [stdout] test src/record.rs - record::Record::cigar (line 126) ... ok [INFO] [stdout] test src/io/writer.rs - io::writer::Writer::into_inner (line 98) ... ok [INFO] [stdout] test src/record.rs - record::Record::quality_scores (line 209) ... ok [INFO] [stdout] test src/record.rs - record::Record::mate_reference_sequence_name (line 153) ... ok [INFO] [stdout] test src/record.rs - record::Record::mate_reference_sequence_id (line 139) ... ok [INFO] [stdout] test src/record.rs - record::Record::mate_alignment_start (line 168) ... ok [INFO] [stdout] test src/record.rs - record::Record::name (line 39) ... ok [INFO] [stdout] test src/record.rs - record::Record::reference_sequence_id (line 66) ... ok [INFO] [stdout] test src/record.rs - record::Record::mapping_quality (line 109) ... ok [INFO] [stdout] test src/record/cigar.rs - record::cigar::Cigar<'a>::is_empty (line 26) ... ok [INFO] [stdout] test src/record.rs - record::Record::sequence (line 196) ... ok [INFO] [stdout] test src/record.rs - record::Record::template_length (line 182) ... ok [INFO] [stdout] test src/record/quality_scores.rs - record::quality_scores::QualityScores<'a>::len (line 41) ... ok [INFO] [stdout] test src/record/quality_scores.rs - record::quality_scores::QualityScores<'a>::is_empty (line 24) ... ok [INFO] [stdout] test src/record/data/field/value/base_modifications.rs - record::data::field::value::base_modifications::BaseModifications::parse (line 19) ... ok [INFO] [stdout] test src/record/cigar.rs - record::cigar::Cigar<'a>::new (line 14) ... ok [INFO] [stdout] test src/record/cigar.rs - record::cigar::Cigar<'a>::iter (line 43) ... ok [INFO] [stdout] test src/record.rs - record::Record::reference_sequence_name (line 80) ... ok [INFO] [stdout] test src/record/quality_scores.rs - record::quality_scores::QualityScores<'a>::new (line 12) ... ok [INFO] [stdout] test src/record/data/field/value/base_modifications/group/unmodified_base.rs - record::data::field::value::base_modifications::group::unmodified_base::UnmodifiedBase::complement (line 25) ... ok [INFO] [stdout] [INFO] [stdout] test result: ok. 181 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.23s [INFO] [stdout] [INFO] running `Command { std: "docker" "inspect" "179d1add5d2e2894ddc9da41c25ebf4570b9a55e2f0fd574b70bb98d4da136be", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "179d1add5d2e2894ddc9da41c25ebf4570b9a55e2f0fd574b70bb98d4da136be", kill_on_drop: false }` [INFO] [stdout] 179d1add5d2e2894ddc9da41c25ebf4570b9a55e2f0fd574b70bb98d4da136be