[INFO] fetching crate krakenuniq-rs 0.0.4... [INFO] testing krakenuniq-rs-0.0.4 against master#cdb45c87e2cd43495379f7e867e3cc15dcee9f93 for pr-145838-1 [INFO] extracting crate krakenuniq-rs 0.0.4 into /workspace/builds/worker-3-tc1/source [INFO] started tweaking crates.io crate krakenuniq-rs 0.0.4 [INFO] finished tweaking crates.io crate krakenuniq-rs 0.0.4 [INFO] tweaked toml for crates.io crate krakenuniq-rs 0.0.4 written to /workspace/builds/worker-3-tc1/source/Cargo.toml [INFO] validating manifest of crates.io crate krakenuniq-rs 0.0.4 on toolchain cdb45c87e2cd43495379f7e867e3cc15dcee9f93 [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+cdb45c87e2cd43495379f7e867e3cc15dcee9f93" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] crate crates.io crate krakenuniq-rs 0.0.4 already has a lockfile, it will not be regenerated [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+cdb45c87e2cd43495379f7e867e3cc15dcee9f93" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:7ad1b28ee6f5f7f699f6cf7015098d6ccdd96d6f2d78dd06228f5b4c9faf309c" "/opt/rustwide/cargo-home/bin/cargo" "+cdb45c87e2cd43495379f7e867e3cc15dcee9f93" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] 30693c1019c7dd9db89028aa00feba65c53eb4024ffbcbbfd0ff2b0c1092ff78 [INFO] running `Command { std: "docker" "start" "-a" "30693c1019c7dd9db89028aa00feba65c53eb4024ffbcbbfd0ff2b0c1092ff78", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "30693c1019c7dd9db89028aa00feba65c53eb4024ffbcbbfd0ff2b0c1092ff78", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "30693c1019c7dd9db89028aa00feba65c53eb4024ffbcbbfd0ff2b0c1092ff78", kill_on_drop: false }` [INFO] [stdout] 30693c1019c7dd9db89028aa00feba65c53eb4024ffbcbbfd0ff2b0c1092ff78 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:7ad1b28ee6f5f7f699f6cf7015098d6ccdd96d6f2d78dd06228f5b4c9faf309c" "/opt/rustwide/cargo-home/bin/cargo" "+cdb45c87e2cd43495379f7e867e3cc15dcee9f93" "build" "--frozen" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] 835cf4bd9b1f7e26d2a84e2d2199fb44216b5efb312dabe30bd511e36651cbdf [INFO] running `Command { std: "docker" "start" "-a" "835cf4bd9b1f7e26d2a84e2d2199fb44216b5efb312dabe30bd511e36651cbdf", kill_on_drop: false }` [INFO] [stderr] Compiling syn v1.0.109 [INFO] [stderr] Compiling rustversion v1.0.19 [INFO] [stderr] Compiling portable-atomic v1.10.0 [INFO] [stderr] Compiling libc v0.2.169 [INFO] [stderr] Compiling unicode-width v0.2.0 [INFO] [stderr] Compiling quote v1.0.38 [INFO] [stderr] Compiling adler2 v2.0.0 [INFO] [stderr] Compiling thiserror v2.0.9 [INFO] [stderr] Compiling ahash v0.8.11 [INFO] [stderr] Compiling crc32fast v1.4.2 [INFO] [stderr] Compiling maplit v1.0.2 [INFO] [stderr] Compiling env_filter v0.1.3 [INFO] [stderr] Compiling number_prefix v0.4.0 [INFO] [stderr] Compiling colored v2.2.0 [INFO] [stderr] Compiling rayon v1.10.0 [INFO] [stderr] Compiling miniz_oxide v0.8.2 [INFO] [stderr] Compiling syn v2.0.93 [INFO] [stderr] Compiling env_logger v0.11.6 [INFO] [stderr] Compiling flate2 v1.0.35 [INFO] [stderr] Compiling parking_lot_core v0.9.10 [INFO] [stderr] Compiling console v0.15.10 [INFO] [stderr] Compiling getrandom v0.2.15 [INFO] [stderr] Compiling parking_lot v0.12.3 [INFO] [stderr] Compiling indicatif v0.17.9 [INFO] [stderr] Compiling thiserror-impl v2.0.9 [INFO] [stderr] Compiling strum_macros v0.24.3 [INFO] [stderr] Compiling strum v0.24.1 [INFO] [stderr] Compiling spinners v4.1.1 [INFO] [stderr] Compiling krakenuniq-rs v0.0.4 (/opt/rustwide/workdir) [INFO] [stdout] warning: unused import: `std::collections::BTreeMap` [INFO] [stdout] --> src/krakendb.rs:3:5 [INFO] [stdout] | [INFO] [stdout] 3 | use std::collections::BTreeMap; [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_imports)]` (part of `#[warn(unused)]`) on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused imports: `BufRead` and `BufReader` [INFO] [stdout] --> src/krakendb.rs:5:15 [INFO] [stdout] | [INFO] [stdout] 5 | use std::io::{BufRead, BufReader, Error as IoError, ErrorKind, Read, Seek, SeekFrom}; [INFO] [stdout] | ^^^^^^^ ^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused imports: `ErrorKind` and `Error` [INFO] [stdout] --> src/taxdb.rs:5:35 [INFO] [stdout] | [INFO] [stdout] 5 | use std::io::{BufRead, BufReader, Error, ErrorKind}; [INFO] [stdout] | ^^^^^ ^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `ahash::AHashMap` [INFO] [stdout] --> src/lib.rs:9:5 [INFO] [stdout] | [INFO] [stdout] 9 | use ahash::AHashMap; [INFO] [stdout] | ^^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `old_base` [INFO] [stdout] --> src/classify/classify_sequence.rs:41:29 [INFO] [stdout] | [INFO] [stdout] 41 | fn roll_kmer_2bit(old: u64, old_base: u8, new_base: u8, k: usize) -> (u64, bool) { [INFO] [stdout] | ^^^^^^^^ help: if this is intentional, prefix it with an underscore: `_old_base` [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_variables)]` (part of `#[warn(unused)]`) on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: variable does not need to be mutable [INFO] [stdout] --> src/classify/classify_sequence.rs:262:14 [INFO] [stdout] | [INFO] [stdout] 262 | let (mut encoded, valid) = encode_first_kmer(window); [INFO] [stdout] | ----^^^^^^^ [INFO] [stdout] | | [INFO] [stdout] | help: remove this `mut` [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_mut)]` (part of `#[warn(unused)]`) on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `t0` [INFO] [stdout] --> src/lib.rs:141:9 [INFO] [stdout] | [INFO] [stdout] 141 | let t0 = Instant::now(); [INFO] [stdout] | ^^ help: if this is intentional, prefix it with an underscore: `_t0` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `t1` [INFO] [stdout] --> src/lib.rs:147:9 [INFO] [stdout] | [INFO] [stdout] 147 | let t1 = Instant::now(); [INFO] [stdout] | ^^ help: if this is intentional, prefix it with an underscore: `_t1` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: function `roll_kmer_2bit` is never used [INFO] [stdout] --> src/classify/classify_sequence.rs:41:4 [INFO] [stdout] | [INFO] [stdout] 41 | fn roll_kmer_2bit(old: u64, old_base: u8, new_base: u8, k: usize) -> (u64, bool) { [INFO] [stdout] | ^^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(dead_code)]` (part of `#[warn(unused)]`) on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stderr] Finished `dev` profile [unoptimized + debuginfo] target(s) in 13.10s [INFO] running `Command { std: "docker" "inspect" "835cf4bd9b1f7e26d2a84e2d2199fb44216b5efb312dabe30bd511e36651cbdf", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "835cf4bd9b1f7e26d2a84e2d2199fb44216b5efb312dabe30bd511e36651cbdf", kill_on_drop: false }` [INFO] [stdout] 835cf4bd9b1f7e26d2a84e2d2199fb44216b5efb312dabe30bd511e36651cbdf [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:7ad1b28ee6f5f7f699f6cf7015098d6ccdd96d6f2d78dd06228f5b4c9faf309c" "/opt/rustwide/cargo-home/bin/cargo" "+cdb45c87e2cd43495379f7e867e3cc15dcee9f93" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] 4a245c9cd861bc695eb78c07ab3c8d3704bb6e2d52cbc0d828ce0e9a971ee3f4 [INFO] running `Command { std: "docker" "start" "-a" "4a245c9cd861bc695eb78c07ab3c8d3704bb6e2d52cbc0d828ce0e9a971ee3f4", kill_on_drop: false }` [INFO] [stdout] warning: unused import: `std::collections::BTreeMap` [INFO] [stdout] --> src/krakendb.rs:3:5 [INFO] [stdout] | [INFO] [stdout] 3 | use std::collections::BTreeMap; [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_imports)]` (part of `#[warn(unused)]`) on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused imports: `BufRead` and `BufReader` [INFO] [stdout] --> src/krakendb.rs:5:15 [INFO] [stdout] | [INFO] [stdout] 5 | use std::io::{BufRead, BufReader, Error as IoError, ErrorKind, Read, Seek, SeekFrom}; [INFO] [stdout] | ^^^^^^^ ^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused imports: `ErrorKind` and `Error` [INFO] [stdout] --> src/taxdb.rs:5:35 [INFO] [stdout] | [INFO] [stdout] 5 | use std::io::{BufRead, BufReader, Error, ErrorKind}; [INFO] [stdout] | ^^^^^ ^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `ahash::AHashMap` [INFO] [stdout] --> src/lib.rs:9:5 [INFO] [stdout] | [INFO] [stdout] 9 | use ahash::AHashMap; [INFO] [stdout] | ^^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `old_base` [INFO] [stdout] --> src/classify/classify_sequence.rs:41:29 [INFO] [stdout] | [INFO] [stdout] 41 | fn roll_kmer_2bit(old: u64, old_base: u8, new_base: u8, k: usize) -> (u64, bool) { [INFO] [stdout] | ^^^^^^^^ help: if this is intentional, prefix it with an underscore: `_old_base` [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_variables)]` (part of `#[warn(unused)]`) on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: variable does not need to be mutable [INFO] [stdout] --> src/classify/classify_sequence.rs:262:14 [INFO] [stdout] | [INFO] [stdout] 262 | let (mut encoded, valid) = encode_first_kmer(window); [INFO] [stdout] | ----^^^^^^^ [INFO] [stdout] | | [INFO] [stdout] | help: remove this `mut` [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_mut)]` (part of `#[warn(unused)]`) on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `t0` [INFO] [stdout] --> src/lib.rs:141:9 [INFO] [stdout] | [INFO] [stdout] 141 | let t0 = Instant::now(); [INFO] [stdout] | ^^ help: if this is intentional, prefix it with an underscore: `_t0` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `t1` [INFO] [stdout] --> src/lib.rs:147:9 [INFO] [stdout] | [INFO] [stdout] 147 | let t1 = Instant::now(); [INFO] [stdout] | ^^ help: if this is intentional, prefix it with an underscore: `_t1` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: function `roll_kmer_2bit` is never used [INFO] [stdout] --> src/classify/classify_sequence.rs:41:4 [INFO] [stdout] | [INFO] [stdout] 41 | fn roll_kmer_2bit(old: u64, old_base: u8, new_base: u8, k: usize) -> (u64, bool) { [INFO] [stdout] | ^^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(dead_code)]` (part of `#[warn(unused)]`) on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stderr] Compiling krakenuniq-rs v0.0.4 (/opt/rustwide/workdir) [INFO] [stdout] warning: unused import: `std::collections::BTreeMap` [INFO] [stdout] --> src/krakendb.rs:3:5 [INFO] [stdout] | [INFO] [stdout] 3 | use std::collections::BTreeMap; [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_imports)]` (part of `#[warn(unused)]`) on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused imports: `BufRead` and `BufReader` [INFO] [stdout] --> src/krakendb.rs:5:15 [INFO] [stdout] | [INFO] [stdout] 5 | use std::io::{BufRead, BufReader, Error as IoError, ErrorKind, Read, Seek, SeekFrom}; [INFO] [stdout] | ^^^^^^^ ^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused imports: `ErrorKind` and `Error` [INFO] [stdout] --> src/taxdb.rs:5:35 [INFO] [stdout] | [INFO] [stdout] 5 | use std::io::{BufRead, BufReader, Error, ErrorKind}; [INFO] [stdout] | ^^^^^ ^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `ahash::AHashMap` [INFO] [stdout] --> src/lib.rs:9:5 [INFO] [stdout] | [INFO] [stdout] 9 | use ahash::AHashMap; [INFO] [stdout] | ^^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `old_base` [INFO] [stdout] --> src/classify/classify_sequence.rs:41:29 [INFO] [stdout] | [INFO] [stdout] 41 | fn roll_kmer_2bit(old: u64, old_base: u8, new_base: u8, k: usize) -> (u64, bool) { [INFO] [stdout] | ^^^^^^^^ help: if this is intentional, prefix it with an underscore: `_old_base` [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_variables)]` (part of `#[warn(unused)]`) on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: variable does not need to be mutable [INFO] [stdout] --> src/classify/classify_sequence.rs:262:14 [INFO] [stdout] | [INFO] [stdout] 262 | let (mut encoded, valid) = encode_first_kmer(window); [INFO] [stdout] | ----^^^^^^^ [INFO] [stdout] | | [INFO] [stdout] | help: remove this `mut` [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_mut)]` (part of `#[warn(unused)]`) on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `t0` [INFO] [stdout] --> src/lib.rs:141:9 [INFO] [stdout] | [INFO] [stdout] 141 | let t0 = Instant::now(); [INFO] [stdout] | ^^ help: if this is intentional, prefix it with an underscore: `_t0` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `t1` [INFO] [stdout] --> src/lib.rs:147:9 [INFO] [stdout] | [INFO] [stdout] 147 | let t1 = Instant::now(); [INFO] [stdout] | ^^ help: if this is intentional, prefix it with an underscore: `_t1` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: function `roll_kmer_2bit` is never used [INFO] [stdout] --> src/classify/classify_sequence.rs:41:4 [INFO] [stdout] | [INFO] [stdout] 41 | fn roll_kmer_2bit(old: u64, old_base: u8, new_base: u8, k: usize) -> (u64, bool) { [INFO] [stdout] | ^^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(dead_code)]` (part of `#[warn(unused)]`) on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stderr] Finished `test` profile [unoptimized + debuginfo] target(s) in 1.66s [INFO] running `Command { std: "docker" "inspect" "4a245c9cd861bc695eb78c07ab3c8d3704bb6e2d52cbc0d828ce0e9a971ee3f4", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "4a245c9cd861bc695eb78c07ab3c8d3704bb6e2d52cbc0d828ce0e9a971ee3f4", kill_on_drop: false }` [INFO] [stdout] 4a245c9cd861bc695eb78c07ab3c8d3704bb6e2d52cbc0d828ce0e9a971ee3f4 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:7ad1b28ee6f5f7f699f6cf7015098d6ccdd96d6f2d78dd06228f5b4c9faf309c" "/opt/rustwide/cargo-home/bin/cargo" "+cdb45c87e2cd43495379f7e867e3cc15dcee9f93" "test" "--frozen", kill_on_drop: false }` [INFO] [stdout] 58c51eede82854e69ac5116b6676f22c67793b989279604ff7c595062c2deb01 [INFO] running `Command { std: "docker" "start" "-a" "58c51eede82854e69ac5116b6676f22c67793b989279604ff7c595062c2deb01", kill_on_drop: false }` [INFO] [stderr] warning: unused import: `std::collections::BTreeMap` [INFO] [stderr] --> src/krakendb.rs:3:5 [INFO] [stderr] | [INFO] [stderr] 3 | use std::collections::BTreeMap; [INFO] [stderr] | ^^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stderr] | [INFO] [stderr] = note: `#[warn(unused_imports)]` (part of `#[warn(unused)]`) on by default [INFO] [stderr] [INFO] [stderr] warning: unused imports: `BufRead` and `BufReader` [INFO] [stderr] --> src/krakendb.rs:5:15 [INFO] [stderr] | [INFO] [stderr] 5 | use std::io::{BufRead, BufReader, Error as IoError, ErrorKind, Read, Seek, SeekFrom}; [INFO] [stderr] | ^^^^^^^ ^^^^^^^^^ [INFO] [stderr] [INFO] [stderr] warning: unused imports: `ErrorKind` and `Error` [INFO] [stderr] --> src/taxdb.rs:5:35 [INFO] [stderr] | [INFO] [stderr] 5 | use std::io::{BufRead, BufReader, Error, ErrorKind}; [INFO] [stderr] | ^^^^^ ^^^^^^^^^ [INFO] [stderr] [INFO] [stderr] warning: unused import: `ahash::AHashMap` [INFO] [stderr] --> src/lib.rs:9:5 [INFO] [stderr] | [INFO] [stderr] 9 | use ahash::AHashMap; [INFO] [stderr] | ^^^^^^^^^^^^^^^ [INFO] [stderr] [INFO] [stderr] warning: unused variable: `old_base` [INFO] [stderr] --> src/classify/classify_sequence.rs:41:29 [INFO] [stderr] | [INFO] [stderr] 41 | fn roll_kmer_2bit(old: u64, old_base: u8, new_base: u8, k: usize) -> (u64, bool) { [INFO] [stderr] | ^^^^^^^^ help: if this is intentional, prefix it with an underscore: `_old_base` [INFO] [stderr] | [INFO] [stderr] = note: `#[warn(unused_variables)]` (part of `#[warn(unused)]`) on by default [INFO] [stderr] [INFO] [stderr] warning: variable does not need to be mutable [INFO] [stderr] --> src/classify/classify_sequence.rs:262:14 [INFO] [stderr] | [INFO] [stderr] 262 | let (mut encoded, valid) = encode_first_kmer(window); [INFO] [stderr] | ----^^^^^^^ [INFO] [stderr] | | [INFO] [stderr] | help: remove this `mut` [INFO] [stderr] | [INFO] [stderr] = note: `#[warn(unused_mut)]` (part of `#[warn(unused)]`) on by default [INFO] [stderr] [INFO] [stderr] warning: unused variable: `t0` [INFO] [stderr] --> src/lib.rs:141:9 [INFO] [stderr] | [INFO] [stderr] 141 | let t0 = Instant::now(); [INFO] [stderr] | ^^ help: if this is intentional, prefix it with an underscore: `_t0` [INFO] [stderr] [INFO] [stderr] warning: unused variable: `t1` [INFO] [stderr] --> src/lib.rs:147:9 [INFO] [stderr] | [INFO] [stderr] 147 | let t1 = Instant::now(); [INFO] [stderr] | ^^ help: if this is intentional, prefix it with an underscore: `_t1` [INFO] [stderr] [INFO] [stderr] warning: function `roll_kmer_2bit` is never used [INFO] [stderr] --> src/classify/classify_sequence.rs:41:4 [INFO] [stderr] | [INFO] [stderr] 41 | fn roll_kmer_2bit(old: u64, old_base: u8, new_base: u8, k: usize) -> (u64, bool) { [INFO] [stderr] | ^^^^^^^^^^^^^^ [INFO] [stderr] | [INFO] [stderr] = note: `#[warn(dead_code)]` (part of `#[warn(unused)]`) on by default [INFO] [stderr] [INFO] [stderr] warning: `krakenuniq-rs` (lib) generated 9 warnings (run `cargo fix --lib -p krakenuniq-rs` to apply 5 suggestions) [INFO] [stderr] warning: `krakenuniq-rs` (lib test) generated 9 warnings (9 duplicates) [INFO] [stderr] Finished `test` profile [unoptimized + debuginfo] target(s) in 0.17s [INFO] [stderr] Running unittests src/lib.rs (/opt/rustwide/target/debug/deps/krakenuniq_rs-87d84e4c32da158e) [INFO] [stdout] [INFO] [stdout] running 1 test [INFO] [stdout] test tests::test_classify_reads_api ... FAILED [INFO] [stdout] [INFO] [stdout] failures: [INFO] [stdout] [INFO] [stdout] ---- tests::test_classify_reads_api stdout ---- [INFO] [stdout] [INFO] [stdout] thread 'tests::test_classify_reads_api' (25) panicked at src/lib.rs:222:14: [INFO] [stdout] Cannot read directory 'barcode03': Os { code: 2, kind: NotFound, message: "No such file or directory" } [INFO] [stdout] stack backtrace: [INFO] [stdout] 0: 0x56fca68d76e2 - std::backtrace_rs::backtrace::libunwind::trace::h7cddb8376417e7cc [INFO] [stdout] at /rustc/cdb45c87e2cd43495379f7e867e3cc15dcee9f93/library/std/src/../../backtrace/src/backtrace/libunwind.rs:117:9 [INFO] [stdout] 1: 0x56fca68d76e2 - std::backtrace_rs::backtrace::trace_unsynchronized::hb4e41acf4b349ff1 [INFO] [stdout] at /rustc/cdb45c87e2cd43495379f7e867e3cc15dcee9f93/library/std/src/../../backtrace/src/backtrace/mod.rs:66:14 [INFO] [stdout] 2: 0x56fca68d76e2 - std::sys::backtrace::_print_fmt::h1222b80910ba6eb5 [INFO] [stdout] at /rustc/cdb45c87e2cd43495379f7e867e3cc15dcee9f93/library/std/src/sys/backtrace.rs:66:9 [INFO] [stdout] 3: 0x56fca68d76e2 - ::fmt::h5bb8a979ba5db788 [INFO] [stdout] at /rustc/cdb45c87e2cd43495379f7e867e3cc15dcee9f93/library/std/src/sys/backtrace.rs:39:26 [INFO] [stdout] 4: 0x56fca68e948f - core::fmt::rt::Argument::fmt::h2ee2c138a50a7796 [INFO] [stdout] at /rustc/cdb45c87e2cd43495379f7e867e3cc15dcee9f93/library/core/src/fmt/rt.rs:173:76 [INFO] [stdout] 5: 0x56fca68e948f - core::fmt::write::h1e0dbf07fe3990bd [INFO] [stdout] at /rustc/cdb45c87e2cd43495379f7e867e3cc15dcee9f93/library/core/src/fmt/mod.rs:1468:25 [INFO] [stdout] 6: 0x56fca68a44d3 - std::io::default_write_fmt::h7d7ad5ed6a883d81 [INFO] [stdout] at /rustc/cdb45c87e2cd43495379f7e867e3cc15dcee9f93/library/std/src/io/mod.rs:639:11 [INFO] [stdout] 7: 0x56fca68a44d3 - std::io::Write::write_fmt::hc477d9325b345ece [INFO] [stdout] at /rustc/cdb45c87e2cd43495379f7e867e3cc15dcee9f93/library/std/src/io/mod.rs:1954:13 [INFO] [stdout] 8: 0x56fca68b05f2 - std::sys::backtrace::BacktraceLock::print::h788d486777205086 [INFO] [stdout] at /rustc/cdb45c87e2cd43495379f7e867e3cc15dcee9f93/library/std/src/sys/backtrace.rs:42:9 [INFO] [stdout] 9: 0x56fca68b52ef - std::panicking::default_hook::{{closure}}::ha7bdfeb5949fc0fa [INFO] [stdout] at /rustc/cdb45c87e2cd43495379f7e867e3cc15dcee9f93/library/std/src/panicking.rs:301:27 [INFO] [stdout] 10: 0x56fca68b5181 - std::panicking::default_hook::h6dad75ec721846f4 [INFO] [stdout] at /rustc/cdb45c87e2cd43495379f7e867e3cc15dcee9f93/library/std/src/panicking.rs:325:9 [INFO] [stdout] 11: 0x56fca682e83e - as core::ops::function::Fn>::call::h33799d04b0b96146 [INFO] [stdout] at /rustc/cdb45c87e2cd43495379f7e867e3cc15dcee9f93/library/alloc/src/boxed.rs:1999:9 [INFO] [stdout] 12: 0x56fca682e83e - test::test_main_with_exit_callback::{{closure}}::h880e31c829a2eb5d [INFO] [stdout] at /rustc/cdb45c87e2cd43495379f7e867e3cc15dcee9f93/library/test/src/lib.rs:145:21 [INFO] [stdout] 13: 0x56fca68b5a3e - as core::ops::function::Fn>::call::h5e1b8c652ea49180 [INFO] [stdout] at /rustc/cdb45c87e2cd43495379f7e867e3cc15dcee9f93/library/alloc/src/boxed.rs:1999:9 [INFO] [stdout] 14: 0x56fca68b5a3e - std::panicking::panic_with_hook::hba00e869ada17676 [INFO] [stdout] at /rustc/cdb45c87e2cd43495379f7e867e3cc15dcee9f93/library/std/src/panicking.rs:842:13 [INFO] [stdout] 15: 0x56fca68b575a - std::panicking::panic_handler::{{closure}}::h3d21149c258e5ceb [INFO] [stdout] at /rustc/cdb45c87e2cd43495379f7e867e3cc15dcee9f93/library/std/src/panicking.rs:707:13 [INFO] [stdout] 16: 0x56fca68b0729 - std::sys::backtrace::__rust_end_short_backtrace::h4f5d9b9dfb3e6ec1 [INFO] [stdout] at /rustc/cdb45c87e2cd43495379f7e867e3cc15dcee9f93/library/std/src/sys/backtrace.rs:174:18 [INFO] [stdout] 17: 0x56fca6897a7d - __rustc[9a7a9f9af7564de1]::rust_begin_unwind [INFO] [stdout] at /rustc/cdb45c87e2cd43495379f7e867e3cc15dcee9f93/library/std/src/panicking.rs:698:5 [INFO] [stdout] 18: 0x56fca68f13e0 - core::panicking::panic_fmt::h78e817a90331d98b [INFO] [stdout] at /rustc/cdb45c87e2cd43495379f7e867e3cc15dcee9f93/library/core/src/panicking.rs:75:14 [INFO] [stdout] 19: 0x56fca68f0616 - core::result::unwrap_failed::h3ce108722ad88f1e [INFO] [stdout] at /rustc/cdb45c87e2cd43495379f7e867e3cc15dcee9f93/library/core/src/result.rs:1852:5 [INFO] [stdout] 20: 0x56fca67c33c8 - core::result::Result::expect::h1eef4ad8df2f06e5 [INFO] [stdout] at /rustc/cdb45c87e2cd43495379f7e867e3cc15dcee9f93/library/core/src/result.rs:1175:23 [INFO] [stdout] 21: 0x56fca67f85d8 - krakenuniq_rs::tests::test_classify_reads_api::h7fca8be5ca01f239 [INFO] [stdout] at /opt/rustwide/workdir/src/lib.rs:222:14 [INFO] [stdout] 22: 0x56fca67f9077 - krakenuniq_rs::tests::test_classify_reads_api::{{closure}}::h4416fbb5b97ca989 [INFO] [stdout] at /opt/rustwide/workdir/src/lib.rs:219:33 [INFO] [stdout] 23: 0x56fca67ec2e6 - core::ops::function::FnOnce::call_once::hea4103f7e447bc03 [INFO] [stdout] at /rustc/cdb45c87e2cd43495379f7e867e3cc15dcee9f93/library/core/src/ops/function.rs:253:5 [INFO] [stdout] 24: 0x56fca682e63b - core::ops::function::FnOnce::call_once::h7f4b4fba903e39d5 [INFO] [stdout] at /rustc/cdb45c87e2cd43495379f7e867e3cc15dcee9f93/library/core/src/ops/function.rs:253:5 [INFO] [stdout] 25: 0x56fca682e63b - test::__rust_begin_short_backtrace::h9277cb6a2ccfc000 [INFO] [stdout] at /rustc/cdb45c87e2cd43495379f7e867e3cc15dcee9f93/library/test/src/lib.rs:663:18 [INFO] [stdout] 26: 0x56fca68440e5 - test::run_test_in_process::{{closure}}::h9aea5ca90d1f4423 [INFO] [stdout] at /rustc/cdb45c87e2cd43495379f7e867e3cc15dcee9f93/library/test/src/lib.rs:686:74 [INFO] [stdout] 27: 0x56fca68440e5 - as core::ops::function::FnOnce<()>>::call_once::h364f5fe6cc8afa85 [INFO] [stdout] at /rustc/cdb45c87e2cd43495379f7e867e3cc15dcee9f93/library/core/src/panic/unwind_safe.rs:272:9 [INFO] [stdout] 28: 0x56fca68440e5 - std::panicking::catch_unwind::do_call::h2b2bec3317fe53ec [INFO] [stdout] at /rustc/cdb45c87e2cd43495379f7e867e3cc15dcee9f93/library/std/src/panicking.rs:590:40 [INFO] [stdout] 29: 0x56fca68440e5 - std::panicking::catch_unwind::hc3763734156da4af [INFO] [stdout] at /rustc/cdb45c87e2cd43495379f7e867e3cc15dcee9f93/library/std/src/panicking.rs:553:19 [INFO] [stdout] 30: 0x56fca68440e5 - std::panic::catch_unwind::h28038391e867eabc [INFO] [stdout] at /rustc/cdb45c87e2cd43495379f7e867e3cc15dcee9f93/library/std/src/panic.rs:359:14 [INFO] [stdout] 31: 0x56fca68440e5 - test::run_test_in_process::had0273166695a036 [INFO] [stdout] at /rustc/cdb45c87e2cd43495379f7e867e3cc15dcee9f93/library/test/src/lib.rs:686:27 [INFO] [stdout] 32: 0x56fca68440e5 - test::run_test::{{closure}}::h743d09d4bb476605 [INFO] [stdout] at /rustc/cdb45c87e2cd43495379f7e867e3cc15dcee9f93/library/test/src/lib.rs:607:43 [INFO] [stdout] 33: 0x56fca681ab04 - test::run_test::{{closure}}::he950b8f9118d37e2 [INFO] [stdout] at /rustc/cdb45c87e2cd43495379f7e867e3cc15dcee9f93/library/test/src/lib.rs:637:41 [INFO] [stdout] 34: 0x56fca681ab04 - std::sys::backtrace::__rust_begin_short_backtrace::hbfaffa6539f6abb7 [INFO] [stdout] at /rustc/cdb45c87e2cd43495379f7e867e3cc15dcee9f93/library/std/src/sys/backtrace.rs:158:18 [INFO] [stdout] 35: 0x56fca681e3ea - std::thread::Builder::spawn_unchecked_::{{closure}}::{{closure}}::hcce3c2c65b9c3b20 [INFO] [stdout] at /rustc/cdb45c87e2cd43495379f7e867e3cc15dcee9f93/library/std/src/thread/mod.rs:559:17 [INFO] [stdout] 36: 0x56fca681e3ea - as core::ops::function::FnOnce<()>>::call_once::hb66b30b6d37985a5 [INFO] [stdout] at /rustc/cdb45c87e2cd43495379f7e867e3cc15dcee9f93/library/core/src/panic/unwind_safe.rs:272:9 [INFO] [stdout] 37: 0x56fca681e3ea - std::panicking::catch_unwind::do_call::h992bbe2c32dc1d79 [INFO] [stdout] at /rustc/cdb45c87e2cd43495379f7e867e3cc15dcee9f93/library/std/src/panicking.rs:590:40 [INFO] [stdout] 38: 0x56fca681e3ea - std::panicking::catch_unwind::h412991d5237de610 [INFO] [stdout] at /rustc/cdb45c87e2cd43495379f7e867e3cc15dcee9f93/library/std/src/panicking.rs:553:19 [INFO] [stdout] 39: 0x56fca681e3ea - std::panic::catch_unwind::ha82b139b3eb5840a [INFO] [stdout] at /rustc/cdb45c87e2cd43495379f7e867e3cc15dcee9f93/library/std/src/panic.rs:359:14 [INFO] [stdout] 40: 0x56fca681e3ea - std::thread::Builder::spawn_unchecked_::{{closure}}::ha823b36f5114938e [INFO] [stdout] at /rustc/cdb45c87e2cd43495379f7e867e3cc15dcee9f93/library/std/src/thread/mod.rs:557:30 [INFO] [stdout] 41: 0x56fca681e3ea - core::ops::function::FnOnce::call_once{{vtable.shim}}::hf120e7b1db22ac07 [INFO] [stdout] at /rustc/cdb45c87e2cd43495379f7e867e3cc15dcee9f93/library/core/src/ops/function.rs:253:5 [INFO] [stdout] 42: 0x56fca68aa83f - as core::ops::function::FnOnce>::call_once::h3e049222c99298ac [INFO] [stdout] at /rustc/cdb45c87e2cd43495379f7e867e3cc15dcee9f93/library/alloc/src/boxed.rs:1985:9 [INFO] [stdout] 43: 0x56fca68aa83f - std::sys::pal::unix::thread::Thread::new::thread_start::h942e336943ad5963 [INFO] [stdout] at /rustc/cdb45c87e2cd43495379f7e867e3cc15dcee9f93/library/std/src/sys/pal/unix/thread.rs:118:17 [INFO] [stdout] 44: 0x7eb3d4a0eaa4 - [INFO] [stdout] 45: 0x7eb3d4a9ba34 - clone [INFO] [stdout] 46: 0x0 - [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] failures: [INFO] [stdout] tests::test_classify_reads_api [INFO] [stdout] [INFO] [stdout] test result: FAILED. 0 passed; 1 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.04s [INFO] [stdout] [INFO] [stderr] error: test failed, to rerun pass `--lib` [INFO] running `Command { std: "docker" "inspect" "58c51eede82854e69ac5116b6676f22c67793b989279604ff7c595062c2deb01", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "58c51eede82854e69ac5116b6676f22c67793b989279604ff7c595062c2deb01", kill_on_drop: false }` [INFO] [stdout] 58c51eede82854e69ac5116b6676f22c67793b989279604ff7c595062c2deb01