[INFO] fetching crate kira_cdh_compat_kmer_indexer 0.2.0... [INFO] testing kira_cdh_compat_kmer_indexer-0.2.0 against master#cdb45c87e2cd43495379f7e867e3cc15dcee9f93 for pr-145838-1 [INFO] extracting crate kira_cdh_compat_kmer_indexer 0.2.0 into /workspace/builds/worker-5-tc1/source [INFO] removed /workspace/builds/worker-5-tc1/source/.cargo/config.toml [INFO] started tweaking crates.io crate kira_cdh_compat_kmer_indexer 0.2.0 [INFO] removed 0 missing tests [INFO] finished tweaking crates.io crate kira_cdh_compat_kmer_indexer 0.2.0 [INFO] tweaked toml for crates.io crate kira_cdh_compat_kmer_indexer 0.2.0 written to /workspace/builds/worker-5-tc1/source/Cargo.toml [INFO] validating manifest of crates.io crate kira_cdh_compat_kmer_indexer 0.2.0 on toolchain cdb45c87e2cd43495379f7e867e3cc15dcee9f93 [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+cdb45c87e2cd43495379f7e867e3cc15dcee9f93" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] crate crates.io crate kira_cdh_compat_kmer_indexer 0.2.0 already has a lockfile, it will not be regenerated [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+cdb45c87e2cd43495379f7e867e3cc15dcee9f93" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] Updating crates.io index [INFO] [stderr] Downloading crates ... [INFO] [stderr] Downloaded kira_cdh_compat_fastq_reader v0.1.3 [INFO] [stderr] Downloaded proc-macro2 v1.0.100 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-5-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-5-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:7ad1b28ee6f5f7f699f6cf7015098d6ccdd96d6f2d78dd06228f5b4c9faf309c" "/opt/rustwide/cargo-home/bin/cargo" "+cdb45c87e2cd43495379f7e867e3cc15dcee9f93" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] e3830e637000ca009729ea9a48c01d3cfb287911eb454713998cfa6c444b445a [INFO] running `Command { std: "docker" "start" "-a" "e3830e637000ca009729ea9a48c01d3cfb287911eb454713998cfa6c444b445a", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "e3830e637000ca009729ea9a48c01d3cfb287911eb454713998cfa6c444b445a", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "e3830e637000ca009729ea9a48c01d3cfb287911eb454713998cfa6c444b445a", kill_on_drop: false }` [INFO] [stdout] e3830e637000ca009729ea9a48c01d3cfb287911eb454713998cfa6c444b445a [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-5-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-5-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:7ad1b28ee6f5f7f699f6cf7015098d6ccdd96d6f2d78dd06228f5b4c9faf309c" "/opt/rustwide/cargo-home/bin/cargo" "+cdb45c87e2cd43495379f7e867e3cc15dcee9f93" "build" "--frozen" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] 60e7e4811a4428936affa0c231781068311a12468fffabf92516b7a25a93a779 [INFO] running `Command { std: "docker" "start" "-a" "60e7e4811a4428936affa0c231781068311a12468fffabf92516b7a25a93a779", kill_on_drop: false }` [INFO] [stderr] Compiling proc-macro2 v1.0.100 [INFO] [stderr] Compiling getrandom v0.3.3 [INFO] [stderr] Compiling crc32fast v1.5.0 [INFO] [stderr] Compiling adler2 v2.0.1 [INFO] [stderr] Compiling bitflags v2.9.2 [INFO] [stderr] Compiling anstyle-query v1.1.4 [INFO] [stderr] Compiling anstyle-parse v0.2.7 [INFO] [stderr] Compiling num-traits v0.2.19 [INFO] [stderr] Compiling colorchoice v1.0.4 [INFO] [stderr] Compiling once_cell v1.21.3 [INFO] [stderr] Compiling ppv-lite86 v0.2.21 [INFO] [stderr] Compiling tokio v1.47.1 [INFO] [stderr] Compiling wait-timeout v0.2.1 [INFO] [stderr] Compiling futures-core v0.3.31 [INFO] [stderr] Compiling bit-vec v0.8.0 [INFO] [stderr] Compiling quick-error v1.2.3 [INFO] [stderr] Compiling memmap2 v0.9.7 [INFO] [stderr] Compiling miniz_oxide v0.8.9 [INFO] [stderr] Compiling rustix v1.0.8 [INFO] [stderr] Compiling either v1.15.0 [INFO] [stderr] Compiling regex-syntax v0.8.5 [INFO] [stderr] Compiling unarray v0.1.4 [INFO] [stderr] Compiling anstream v0.6.20 [INFO] [stderr] Compiling bit-set v0.8.0 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warning: unused import: `KmerIndexWriter` [INFO] [stdout] --> src/builder.rs:7:30 [INFO] [stdout] | [INFO] [stdout] 7 | use crate::io::{Compression, KmerIndexWriter}; [INFO] [stdout] | ^^^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_imports)]` (part of `#[warn(unused)]`) on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `crate::plr::PlrSamples` [INFO] [stdout] --> src/builder.rs:8:5 [INFO] [stdout] | [INFO] [stdout] 8 | use crate::plr::PlrSamples; [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `crate::radix::radix_sort_pairs_u64` [INFO] [stdout] --> src/builder.rs:9:5 [INFO] [stdout] | [INFO] [stdout] 9 | use crate::radix::radix_sort_pairs_u64; [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `std::fs::File` [INFO] [stdout] --> src/io.rs:9:5 [INFO] [stdout] | [INFO] [stdout] 9 | use std::fs::File; [INFO] [stdout] | ^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `strategy` [INFO] [stdout] --> src/index.rs:155:13 [INFO] [stdout] | [INFO] [stdout] 155 | let strategy = if header.version == 1 { [INFO] [stdout] | ^^^^^^^^ help: if this is intentional, prefix it with an underscore: `_strategy` [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_variables)]` (part of `#[warn(unused)]`) on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: variable does not need to be mutable [INFO] [stdout] --> src/io.rs:296:13 [INFO] [stdout] | [INFO] [stdout] 296 | let mut header = FileHeader { [INFO] [stdout] | ----^^^^^^ [INFO] [stdout] | | [INFO] [stdout] | help: remove this `mut` [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_mut)]` (part of `#[warn(unused)]`) on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: type `OwnedBuckets` is more private than the item `KmerIndex::owned_mut` [INFO] [stdout] --> src/index.rs:297:5 [INFO] [stdout] | [INFO] [stdout] 297 | pub(crate) fn owned_mut(&mut self) -> Option<&mut OwnedBuckets> { [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ method `KmerIndex::owned_mut` is reachable at visibility `pub(crate)` [INFO] [stdout] | [INFO] [stdout] note: but type `OwnedBuckets` is only usable at visibility `pub(self)` [INFO] [stdout] --> src/index.rs:50:1 [INFO] [stdout] | [INFO] [stdout] 50 | struct OwnedBuckets { [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] = note: `#[warn(private_interfaces)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: methods `owned_mut` and `strategy` are never used [INFO] [stdout] --> src/index.rs:297:19 [INFO] [stdout] | [INFO] [stdout] 87 | impl KmerIndex { [INFO] [stdout] | -------------- methods in this implementation [INFO] [stdout] ... [INFO] [stdout] 297 | pub(crate) fn owned_mut(&mut self) -> Option<&mut OwnedBuckets> { [INFO] [stdout] | ^^^^^^^^^ [INFO] [stdout] ... [INFO] [stdout] 371 | pub(crate) fn strategy(&self) -> LocateStrategy { [INFO] [stdout] | ^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(dead_code)]` (part of `#[warn(unused)]`) on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: variable `B` should have a snake case name [INFO] [stdout] --> src/builder.rs:119:13 [INFO] [stdout] | [INFO] [stdout] 119 | let mut B = cfg.bucket_bits().min(14); [INFO] [stdout] | ^ help: convert the identifier to snake case: `b` [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(non_snake_case)]` (part of `#[warn(nonstandard_style)]`) on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stderr] Finished `dev` profile [unoptimized + debuginfo] target(s) in 16.03s [INFO] running `Command { std: "docker" "inspect" "60e7e4811a4428936affa0c231781068311a12468fffabf92516b7a25a93a779", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "60e7e4811a4428936affa0c231781068311a12468fffabf92516b7a25a93a779", kill_on_drop: false }` [INFO] [stdout] 60e7e4811a4428936affa0c231781068311a12468fffabf92516b7a25a93a779 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-5-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-5-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:7ad1b28ee6f5f7f699f6cf7015098d6ccdd96d6f2d78dd06228f5b4c9faf309c" "/opt/rustwide/cargo-home/bin/cargo" "+cdb45c87e2cd43495379f7e867e3cc15dcee9f93" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] ffa1f77f42235b99bf1582455c23b77a872eb13e248d6512a60e8ce2e3ef48ef [INFO] running `Command { std: "docker" "start" "-a" "ffa1f77f42235b99bf1582455c23b77a872eb13e248d6512a60e8ce2e3ef48ef", kill_on_drop: false }` [INFO] [stderr] Compiling serde_json v1.0.142 [INFO] [stderr] Compiling serde_derive v1.0.219 [INFO] [stderr] Compiling tempfile v3.20.0 [INFO] [stderr] Compiling half v2.6.0 [INFO] [stderr] Compiling regex-automata v0.4.9 [INFO] [stderr] Compiling rusty-fork v0.3.0 [INFO] [stderr] Compiling ciborium-ll v0.2.2 [INFO] [stderr] Compiling proptest v1.7.0 [INFO] [stderr] Compiling regex v1.11.1 [INFO] [stderr] Compiling serde v1.0.219 [INFO] [stderr] Compiling kira_cdh_compat_kmer_indexer v0.2.0 (/opt/rustwide/workdir) [INFO] [stdout] warning: unused import: `KmerIndexWriter` [INFO] [stdout] --> src/builder.rs:7:30 [INFO] [stdout] | [INFO] [stdout] 7 | use crate::io::{Compression, KmerIndexWriter}; [INFO] [stdout] | ^^^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_imports)]` (part of `#[warn(unused)]`) on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `crate::plr::PlrSamples` [INFO] [stdout] --> src/builder.rs:8:5 [INFO] [stdout] | [INFO] [stdout] 8 | use crate::plr::PlrSamples; [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `crate::radix::radix_sort_pairs_u64` [INFO] [stdout] --> src/builder.rs:9:5 [INFO] [stdout] | [INFO] [stdout] 9 | use crate::radix::radix_sort_pairs_u64; [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `std::fs::File` [INFO] [stdout] --> src/io.rs:9:5 [INFO] [stdout] | [INFO] [stdout] 9 | use std::fs::File; [INFO] [stdout] | ^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `strategy` [INFO] [stdout] --> src/index.rs:155:13 [INFO] [stdout] | [INFO] [stdout] 155 | let strategy = if header.version == 1 { [INFO] [stdout] | ^^^^^^^^ help: if this is intentional, prefix it with an underscore: `_strategy` [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_variables)]` (part of `#[warn(unused)]`) on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: variable does not need to be mutable [INFO] [stdout] --> src/io.rs:296:13 [INFO] [stdout] | [INFO] [stdout] 296 | let mut header = FileHeader { [INFO] [stdout] | ----^^^^^^ [INFO] [stdout] | | [INFO] [stdout] | help: remove this `mut` [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_mut)]` (part of `#[warn(unused)]`) on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: type `OwnedBuckets` is more private than the item `KmerIndex::owned_mut` [INFO] [stdout] --> src/index.rs:297:5 [INFO] [stdout] | [INFO] [stdout] 297 | pub(crate) fn owned_mut(&mut self) -> Option<&mut OwnedBuckets> { [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ method `KmerIndex::owned_mut` is reachable at visibility `pub(crate)` [INFO] [stdout] | [INFO] [stdout] note: but type `OwnedBuckets` is only usable at visibility `pub(self)` [INFO] [stdout] --> src/index.rs:50:1 [INFO] [stdout] | [INFO] [stdout] 50 | struct OwnedBuckets { [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] = note: `#[warn(private_interfaces)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: methods `owned_mut` and `strategy` are never used [INFO] [stdout] --> src/index.rs:297:19 [INFO] [stdout] | [INFO] [stdout] 87 | impl KmerIndex { [INFO] [stdout] | -------------- methods in this implementation [INFO] [stdout] ... [INFO] [stdout] 297 | pub(crate) fn owned_mut(&mut self) -> Option<&mut OwnedBuckets> { [INFO] [stdout] | ^^^^^^^^^ [INFO] [stdout] ... [INFO] [stdout] 371 | pub(crate) fn strategy(&self) -> LocateStrategy { [INFO] [stdout] | ^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(dead_code)]` (part of `#[warn(unused)]`) on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: variable `B` should have a snake case name [INFO] [stdout] --> src/builder.rs:119:13 [INFO] [stdout] | [INFO] [stdout] 119 | let mut B = cfg.bucket_bits().min(14); [INFO] [stdout] | ^ help: convert the identifier to snake case: `b` [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(non_snake_case)]` (part of `#[warn(nonstandard_style)]`) on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stderr] Compiling ciborium v0.2.2 [INFO] [stderr] Compiling tinytemplate v1.2.1 [INFO] [stderr] Compiling criterion v0.5.1 [INFO] [stdout] warning: unused import: `KmerIndexWriter` [INFO] [stdout] --> src/builder.rs:7:30 [INFO] [stdout] | [INFO] [stdout] 7 | use crate::io::{Compression, KmerIndexWriter}; [INFO] [stdout] | ^^^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_imports)]` (part of `#[warn(unused)]`) on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `crate::plr::PlrSamples` [INFO] [stdout] --> src/builder.rs:8:5 [INFO] [stdout] | [INFO] [stdout] 8 | use crate::plr::PlrSamples; [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `crate::radix::radix_sort_pairs_u64` [INFO] [stdout] --> src/builder.rs:9:5 [INFO] [stdout] | [INFO] [stdout] 9 | use crate::radix::radix_sort_pairs_u64; [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `std::fs::File` [INFO] [stdout] --> src/io.rs:9:5 [INFO] [stdout] | [INFO] [stdout] 9 | use std::fs::File; [INFO] [stdout] | ^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `strategy` [INFO] [stdout] --> src/index.rs:155:13 [INFO] [stdout] | [INFO] [stdout] 155 | let strategy = if header.version == 1 { [INFO] [stdout] | ^^^^^^^^ help: if this is intentional, prefix it with an underscore: `_strategy` [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_variables)]` (part of `#[warn(unused)]`) on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: variable `B` should have a snake case name [INFO] [stdout] --> tests/proptests.rs:54:13 [INFO] [stdout] | [INFO] [stdout] 54 | let B = (2*k).min(12) as u8; [INFO] [stdout] | ^ help: convert the identifier to snake case: `b` [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(non_snake_case)]` (part of `#[warn(nonstandard_style)]`) on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: variable does not need to be mutable [INFO] [stdout] --> src/io.rs:296:13 [INFO] [stdout] | [INFO] [stdout] 296 | let mut header = FileHeader { [INFO] [stdout] | ----^^^^^^ [INFO] [stdout] | | [INFO] [stdout] | help: remove this `mut` [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_mut)]` (part of `#[warn(unused)]`) on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: type `OwnedBuckets` is more private than the item `KmerIndex::owned_mut` [INFO] [stdout] --> src/index.rs:297:5 [INFO] [stdout] | [INFO] [stdout] 297 | pub(crate) fn owned_mut(&mut self) -> Option<&mut OwnedBuckets> { [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ method `KmerIndex::owned_mut` is reachable at visibility `pub(crate)` [INFO] [stdout] | [INFO] [stdout] note: but type `OwnedBuckets` is only usable at visibility `pub(self)` [INFO] [stdout] --> src/index.rs:50:1 [INFO] [stdout] | [INFO] [stdout] 50 | struct OwnedBuckets { [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] = note: `#[warn(private_interfaces)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: methods `owned_mut` and `strategy` are never used [INFO] [stdout] --> src/index.rs:297:19 [INFO] [stdout] | [INFO] [stdout] 87 | impl KmerIndex { [INFO] [stdout] | -------------- methods in this implementation [INFO] [stdout] ... [INFO] [stdout] 297 | pub(crate) fn owned_mut(&mut self) -> Option<&mut OwnedBuckets> { [INFO] [stdout] | ^^^^^^^^^ [INFO] [stdout] ... [INFO] [stdout] 371 | pub(crate) fn strategy(&self) -> LocateStrategy { [INFO] [stdout] | ^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(dead_code)]` (part of `#[warn(unused)]`) on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: variable `B` should have a snake case name [INFO] [stdout] --> src/builder.rs:119:13 [INFO] [stdout] | [INFO] [stdout] 119 | let mut B = cfg.bucket_bits().min(14); [INFO] [stdout] | ^ help: convert the identifier to snake case: `b` [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(non_snake_case)]` (part of `#[warn(nonstandard_style)]`) on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stderr] Finished `test` profile [unoptimized + debuginfo] target(s) in 15.37s [INFO] running `Command { std: "docker" "inspect" "ffa1f77f42235b99bf1582455c23b77a872eb13e248d6512a60e8ce2e3ef48ef", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "ffa1f77f42235b99bf1582455c23b77a872eb13e248d6512a60e8ce2e3ef48ef", kill_on_drop: false }` [INFO] [stdout] ffa1f77f42235b99bf1582455c23b77a872eb13e248d6512a60e8ce2e3ef48ef [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-5-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-5-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:7ad1b28ee6f5f7f699f6cf7015098d6ccdd96d6f2d78dd06228f5b4c9faf309c" "/opt/rustwide/cargo-home/bin/cargo" "+cdb45c87e2cd43495379f7e867e3cc15dcee9f93" "test" "--frozen", kill_on_drop: false }` [INFO] [stdout] 5d8d965d5a9acaf3f61f845683e82b758b5fc73a02a665777d5ea814b2ad51f8 [INFO] running `Command { std: "docker" "start" "-a" "5d8d965d5a9acaf3f61f845683e82b758b5fc73a02a665777d5ea814b2ad51f8", kill_on_drop: false }` [INFO] [stderr] warning: unused import: `KmerIndexWriter` [INFO] [stderr] --> src/builder.rs:7:30 [INFO] [stderr] | [INFO] [stderr] 7 | use crate::io::{Compression, KmerIndexWriter}; [INFO] [stderr] | ^^^^^^^^^^^^^^^ [INFO] [stderr] | [INFO] [stderr] = note: `#[warn(unused_imports)]` (part of `#[warn(unused)]`) on by default [INFO] [stderr] [INFO] [stderr] warning: unused import: `crate::plr::PlrSamples` [INFO] [stderr] --> src/builder.rs:8:5 [INFO] [stderr] | [INFO] [stderr] 8 | use crate::plr::PlrSamples; [INFO] [stderr] | ^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stderr] [INFO] [stderr] warning: unused import: `crate::radix::radix_sort_pairs_u64` [INFO] [stderr] --> src/builder.rs:9:5 [INFO] [stderr] | [INFO] [stderr] 9 | use crate::radix::radix_sort_pairs_u64; [INFO] [stderr] | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stderr] [INFO] [stderr] warning: unused import: `std::fs::File` [INFO] [stderr] --> src/io.rs:9:5 [INFO] [stderr] | [INFO] [stderr] 9 | use std::fs::File; [INFO] [stderr] | ^^^^^^^^^^^^^ [INFO] [stderr] [INFO] [stderr] warning: unused variable: `strategy` [INFO] [stderr] --> src/index.rs:155:13 [INFO] [stderr] | [INFO] [stderr] 155 | let strategy = if header.version == 1 { [INFO] [stderr] | ^^^^^^^^ help: if this is intentional, prefix it with an underscore: `_strategy` [INFO] [stderr] | [INFO] [stderr] = note: `#[warn(unused_variables)]` (part of `#[warn(unused)]`) on by default [INFO] [stderr] [INFO] [stderr] warning: variable does not need to be mutable [INFO] [stderr] --> src/io.rs:296:13 [INFO] [stderr] | [INFO] [stderr] 296 | let mut header = FileHeader { [INFO] [stderr] | ----^^^^^^ [INFO] [stderr] | | [INFO] [stderr] | help: remove this `mut` [INFO] [stderr] | [INFO] [stderr] = note: `#[warn(unused_mut)]` (part of `#[warn(unused)]`) on by default [INFO] [stderr] [INFO] [stderr] warning: type `OwnedBuckets` is more private than the item `KmerIndex::owned_mut` [INFO] [stderr] --> src/index.rs:297:5 [INFO] [stderr] | [INFO] [stderr] 297 | pub(crate) fn owned_mut(&mut self) -> Option<&mut OwnedBuckets> { [INFO] [stderr] | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ method `KmerIndex::owned_mut` is reachable at visibility `pub(crate)` [INFO] [stderr] | [INFO] [stderr] note: but type `OwnedBuckets` is only usable at visibility `pub(self)` [INFO] [stderr] --> src/index.rs:50:1 [INFO] [stderr] | [INFO] [stderr] 50 | struct OwnedBuckets { [INFO] [stderr] | ^^^^^^^^^^^^^^^^^^^ [INFO] [stderr] = note: `#[warn(private_interfaces)]` on by default [INFO] [stderr] [INFO] [stderr] warning: methods `owned_mut` and `strategy` are never used [INFO] [stderr] --> src/index.rs:297:19 [INFO] [stderr] | [INFO] [stderr] 87 | impl KmerIndex { [INFO] [stderr] | -------------- methods in this implementation [INFO] [stderr] ... [INFO] [stderr] 297 | pub(crate) fn owned_mut(&mut self) -> Option<&mut OwnedBuckets> { [INFO] [stderr] | ^^^^^^^^^ [INFO] [stderr] ... [INFO] [stderr] 371 | pub(crate) fn strategy(&self) -> LocateStrategy { [INFO] [stderr] | ^^^^^^^^ [INFO] [stderr] | [INFO] [stderr] = note: `#[warn(dead_code)]` (part of `#[warn(unused)]`) on by default [INFO] [stderr] [INFO] [stderr] warning: variable `B` should have a snake case name [INFO] [stderr] --> src/builder.rs:119:13 [INFO] [stderr] | [INFO] [stderr] 119 | let mut B = cfg.bucket_bits().min(14); [INFO] [stderr] | ^ help: convert the identifier to snake case: `b` [INFO] [stderr] | [INFO] [stderr] = note: `#[warn(non_snake_case)]` (part of `#[warn(nonstandard_style)]`) on by default [INFO] [stderr] [INFO] [stderr] warning: `kira_cdh_compat_kmer_indexer` (lib) generated 9 warnings (run `cargo fix --lib -p kira_cdh_compat_kmer_indexer` to apply 5 suggestions) [INFO] [stderr] warning: variable `B` should have a snake case name [INFO] [stderr] --> tests/proptests.rs:54:13 [INFO] [stderr] | [INFO] [stderr] 54 | let B = (2*k).min(12) as u8; [INFO] [stderr] | ^ help: convert the identifier to snake case: `b` [INFO] [stderr] | [INFO] [stderr] = note: `#[warn(non_snake_case)]` (part of `#[warn(nonstandard_style)]`) on by default [INFO] [stderr] [INFO] [stderr] warning: `kira_cdh_compat_kmer_indexer` (test "proptests") generated 1 warning [INFO] [stderr] warning: `kira_cdh_compat_kmer_indexer` (lib test) generated 9 warnings (9 duplicates) [INFO] [stderr] Finished `test` profile [unoptimized + debuginfo] target(s) in 0.18s [INFO] [stderr] Running unittests src/lib.rs (/opt/rustwide/target/debug/deps/kira_cdh_compat_kmer_indexer-b765fb6726116015) [INFO] [stdout] [INFO] [stdout] running 0 tests [INFO] [stdout] [INFO] [stdout] test result: ok. 0 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.00s [INFO] [stdout] [INFO] [stderr] Running unittests src/bin/kdx-build.rs (/opt/rustwide/target/debug/deps/kdx_build-d496ec188d8e0196) [INFO] [stdout] [INFO] [stdout] running 0 tests [INFO] [stdout] [INFO] [stdout] test result: ok. 0 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.00s [INFO] [stdout] [INFO] [stderr] Running tests/encode.rs (/opt/rustwide/target/debug/deps/encode-3f94743f10a0d299) [INFO] [stdout] [INFO] [stdout] running 1 test [INFO] [stdout] test test_encode_revcomp_canonical ... ok [INFO] [stdout] [INFO] [stdout] test result: ok. 1 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.00s [INFO] [stdout] [INFO] [stderr] Running tests/proptests.rs (/opt/rustwide/target/debug/deps/proptests-fd1e0f1a34b5af1f) [INFO] [stdout] [INFO] [stdout] running 1 test [INFO] [stdout] test prop_encode_and_bucket ... ok [INFO] [stdout] [INFO] [stdout] test result: ok. 1 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.07s [INFO] [stdout] [INFO] [stderr] Doc-tests kira_cdh_compat_kmer_indexer [INFO] [stdout] [INFO] [stdout] running 0 tests [INFO] [stdout] [INFO] [stdout] test result: ok. 0 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.00s [INFO] [stdout] [INFO] running `Command { std: "docker" "inspect" "5d8d965d5a9acaf3f61f845683e82b758b5fc73a02a665777d5ea814b2ad51f8", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "5d8d965d5a9acaf3f61f845683e82b758b5fc73a02a665777d5ea814b2ad51f8", kill_on_drop: false }` [INFO] [stdout] 5d8d965d5a9acaf3f61f845683e82b758b5fc73a02a665777d5ea814b2ad51f8