[INFO] fetching crate genovo 0.3.2...
[INFO] testing genovo-0.3.2 against master#cdb45c87e2cd43495379f7e867e3cc15dcee9f93 for pr-145838-1
[INFO] extracting crate genovo 0.3.2 into /workspace/builds/worker-3-tc1/source
[INFO] started tweaking crates.io crate genovo 0.3.2
[INFO] finished tweaking crates.io crate genovo 0.3.2
[INFO] tweaked toml for crates.io crate genovo 0.3.2 written to /workspace/builds/worker-3-tc1/source/Cargo.toml
[INFO] validating manifest of crates.io crate genovo 0.3.2 on toolchain cdb45c87e2cd43495379f7e867e3cc15dcee9f93
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+cdb45c87e2cd43495379f7e867e3cc15dcee9f93" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] crate crates.io crate genovo 0.3.2 already has a lockfile, it will not be regenerated
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+cdb45c87e2cd43495379f7e867e3cc15dcee9f93" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] [stderr]     Updating crates.io index
[INFO] [stderr]  Downloading crates ...
[INFO] [stderr]   Downloaded serde_derive v1.0.144
[INFO] [stderr]   Downloaded twobit v0.1.1
[INFO] [stderr]   Downloaded tabfile v0.2.1
[INFO] [stderr]   Downloaded pattern_partition_prediction v0.1.4
[INFO] [stderr]   Downloaded serde_repr v0.1.9
[INFO] [stderr]   Downloaded bigdecimal v0.2.2
[INFO] [stderr]   Downloaded serde v1.0.144
[INFO] [stderr]   Downloaded thiserror-impl v1.0.35
[INFO] [stderr]   Downloaded thiserror v1.0.35
[INFO] [stderr]   Downloaded mutexpect v0.2.7
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:7ad1b28ee6f5f7f699f6cf7015098d6ccdd96d6f2d78dd06228f5b4c9faf309c" "/opt/rustwide/cargo-home/bin/cargo" "+cdb45c87e2cd43495379f7e867e3cc15dcee9f93" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] [stdout] a1f5141511cca1ec89840040d3dfdd90430ef5395ee040cf9253b98ed383086f
[INFO] running `Command { std: "docker" "start" "-a" "a1f5141511cca1ec89840040d3dfdd90430ef5395ee040cf9253b98ed383086f", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "a1f5141511cca1ec89840040d3dfdd90430ef5395ee040cf9253b98ed383086f", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "a1f5141511cca1ec89840040d3dfdd90430ef5395ee040cf9253b98ed383086f", kill_on_drop: false }`
[INFO] [stdout] a1f5141511cca1ec89840040d3dfdd90430ef5395ee040cf9253b98ed383086f
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:7ad1b28ee6f5f7f699f6cf7015098d6ccdd96d6f2d78dd06228f5b4c9faf309c" "/opt/rustwide/cargo-home/bin/cargo" "+cdb45c87e2cd43495379f7e867e3cc15dcee9f93" "build" "--frozen" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] 0644a8ce28f0917c3ff37cb98637a15fe21b078fde9680498792ae90244d955a
[INFO] running `Command { std: "docker" "start" "-a" "0644a8ce28f0917c3ff37cb98637a15fe21b078fde9680498792ae90244d955a", kill_on_drop: false }`
[INFO] [stderr]    Compiling proc-macro2 v1.0.43
[INFO] [stderr]    Compiling unicode-ident v1.0.4
[INFO] [stderr]    Compiling quote v1.0.21
[INFO] [stderr]    Compiling syn v1.0.99
[INFO] [stderr]    Compiling libc v0.2.132
[INFO] [stderr]    Compiling serde_derive v1.0.144
[INFO] [stderr]    Compiling num-traits v0.2.15
[INFO] [stderr]    Compiling serde v1.0.144
[INFO] [stderr]    Compiling memchr v2.5.0
[INFO] [stderr]    Compiling num-integer v0.1.45
[INFO] [stderr]    Compiling num-bigint v0.3.3
[INFO] [stderr]    Compiling thiserror v1.0.35
[INFO] [stderr]    Compiling crc32fast v1.3.2
[INFO] [stderr]    Compiling ppv-lite86 v0.2.16
[INFO] [stderr]    Compiling anyhow v1.0.65
[INFO] [stderr]    Compiling unicode-width v0.1.10
[INFO] [stderr]    Compiling tabfile v0.2.1
[INFO] [stderr]    Compiling regex-automata v0.1.10
[INFO] [stderr]    Compiling pattern_partition_prediction v0.1.4
[INFO] [stderr]    Compiling textwrap v0.11.0
[INFO] [stderr]    Compiling miniz_oxide v0.5.4
[INFO] [stderr]    Compiling csv-core v0.1.10
[INFO] [stderr]    Compiling twobit v0.1.1
[INFO] [stderr]    Compiling ryu v1.0.11
[INFO] [stderr]    Compiling ansi_term v0.12.1
[INFO] [stderr]    Compiling itoa v0.4.8
[INFO] [stderr]    Compiling getrandom v0.1.16
[INFO] [stderr]    Compiling rand_core v0.5.1
[INFO] [stderr]    Compiling atty v0.2.14
[INFO] [stderr]    Compiling clap v2.34.0
[INFO] [stderr]    Compiling rand_chacha v0.2.2
[INFO] [stderr]    Compiling flate2 v1.0.24
[INFO] [stderr]    Compiling rand v0.7.3
[INFO] [stderr]    Compiling thiserror-impl v1.0.35
[INFO] [stderr]    Compiling serde_repr v0.1.9
[INFO] [stderr]    Compiling bigdecimal v0.2.2
[INFO] [stderr]    Compiling bstr v0.2.17
[INFO] [stderr]    Compiling mutexpect v0.2.7
[INFO] [stderr]    Compiling csv v1.1.6
[INFO] [stderr]    Compiling genovo v0.3.2 (/opt/rustwide/workdir)
[INFO] [stderr]     Finished `dev` profile [unoptimized + debuginfo] target(s) in 34.99s
[INFO] running `Command { std: "docker" "inspect" "0644a8ce28f0917c3ff37cb98637a15fe21b078fde9680498792ae90244d955a", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "0644a8ce28f0917c3ff37cb98637a15fe21b078fde9680498792ae90244d955a", kill_on_drop: false }`
[INFO] [stdout] 0644a8ce28f0917c3ff37cb98637a15fe21b078fde9680498792ae90244d955a
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:7ad1b28ee6f5f7f699f6cf7015098d6ccdd96d6f2d78dd06228f5b4c9faf309c" "/opt/rustwide/cargo-home/bin/cargo" "+cdb45c87e2cd43495379f7e867e3cc15dcee9f93" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] 9bb08924256f232c2a4d6b980c2c676cbb871e738fcc0035662c4c4e3a947126
[INFO] running `Command { std: "docker" "start" "-a" "9bb08924256f232c2a4d6b980c2c676cbb871e738fcc0035662c4c4e3a947126", kill_on_drop: false }`
[INFO] [stderr]    Compiling genovo v0.3.2 (/opt/rustwide/workdir)
[INFO] [stderr]     Finished `test` profile [unoptimized + debuginfo] target(s) in 2.50s
[INFO] running `Command { std: "docker" "inspect" "9bb08924256f232c2a4d6b980c2c676cbb871e738fcc0035662c4c4e3a947126", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "9bb08924256f232c2a4d6b980c2c676cbb871e738fcc0035662c4c4e3a947126", kill_on_drop: false }`
[INFO] [stdout] 9bb08924256f232c2a4d6b980c2c676cbb871e738fcc0035662c4c4e3a947126
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:7ad1b28ee6f5f7f699f6cf7015098d6ccdd96d6f2d78dd06228f5b4c9faf309c" "/opt/rustwide/cargo-home/bin/cargo" "+cdb45c87e2cd43495379f7e867e3cc15dcee9f93" "test" "--frozen", kill_on_drop: false }`
[INFO] [stdout] b55ad6e9c4b9c6365a430733e3702f108d3760bb0a47613f0278866253e0c6a9
[INFO] running `Command { std: "docker" "start" "-a" "b55ad6e9c4b9c6365a430733e3702f108d3760bb0a47613f0278866253e0c6a9", kill_on_drop: false }`
[INFO] [stderr]     Finished `test` profile [unoptimized + debuginfo] target(s) in 0.19s
[INFO] [stderr]      Running unittests src/main.rs (/opt/rustwide/target/debug/deps/genovo-fa2cefd0d11d5523)
[INFO] [stdout] 
[INFO] [stdout] running 8 tests
[INFO] [stdout] test counts::tests::test_p_values ... ok
[INFO] [stdout] test counts::tests::test_conf_interval ... ok
[INFO] [stdout] test observed::tests::test_observed_mutations_io ... ok
[INFO] [stdout] test transform::tests::test_gff3_io ... ok
[INFO] [stdout] test transform::tests::test_region_file_io ... ok
[INFO] [stdout] test enumerate::tests::test_possible_mutations_io ... ok
[INFO] [stdout] test sample::tests::test_sampled_mutations_io ... ok
[INFO] [stdout] test expect::tests::test_expected_mutations_io ... ok
[INFO] [stdout] 
[INFO] [stdout] test result: ok. 8 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.02s
[INFO] [stdout] 
[INFO] running `Command { std: "docker" "inspect" "b55ad6e9c4b9c6365a430733e3702f108d3760bb0a47613f0278866253e0c6a9", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "b55ad6e9c4b9c6365a430733e3702f108d3760bb0a47613f0278866253e0c6a9", kill_on_drop: false }`
[INFO] [stdout] b55ad6e9c4b9c6365a430733e3702f108d3760bb0a47613f0278866253e0c6a9