[INFO] cloning repository https://github.com/sriram98v/seq_class [INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/sriram98v/seq_class" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fsriram98v%2Fseq_class", kill_on_drop: false }` [INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fsriram98v%2Fseq_class'... [INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }` [INFO] [stdout] 523e39bf814d4acd2f79c345e1224f05e0cf86ba [INFO] testing sriram98v/seq_class against master#cdb45c87e2cd43495379f7e867e3cc15dcee9f93 for pr-145838-1 [INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fsriram98v%2Fseq_class" "/workspace/builds/worker-5-tc1/source", kill_on_drop: false }` [INFO] [stderr] Cloning into '/workspace/builds/worker-5-tc1/source'... [INFO] [stderr] done. [INFO] started tweaking git repo https://github.com/sriram98v/seq_class [INFO] finished tweaking git repo https://github.com/sriram98v/seq_class [INFO] tweaked toml for git repo https://github.com/sriram98v/seq_class written to /workspace/builds/worker-5-tc1/source/Cargo.toml [INFO] validating manifest of git repo https://github.com/sriram98v/seq_class on toolchain cdb45c87e2cd43495379f7e867e3cc15dcee9f93 [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+cdb45c87e2cd43495379f7e867e3cc15dcee9f93" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] crate git repo https://github.com/sriram98v/seq_class already has a lockfile, it will not be regenerated [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+cdb45c87e2cd43495379f7e867e3cc15dcee9f93" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] Updating crates.io index [INFO] [stderr] Updating git repository `https://github.com/sriram98v/generalized_suffix_tree` [INFO] [stderr] Downloading crates ... 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(https://github.com/sriram98v/generalized_suffix_tree#46349b91) [INFO] [stderr] Compiling seq_class v0.1.0 (/opt/rustwide/workdir) [INFO] [stdout] warning: unexpected `cfg` condition name: `has_error_description_deprecated` [INFO] [stdout] --> src/main.rs:14:1 [INFO] [stdout] | [INFO] [stdout] 14 | / error_chain! { [INFO] [stdout] 15 | | foreign_links { [INFO] [stdout] 16 | | Glob(glob::GlobError); [INFO] [stdout] 17 | | Pattern(glob::PatternError); [INFO] [stdout] 18 | | } [INFO] [stdout] 19 | | } [INFO] [stdout] | |_^ [INFO] [stdout] | [INFO] [stdout] = help: expected names are: `docsrs`, `feature`, and `test` and 31 more [INFO] [stdout] = note: using a cfg inside a macro will use the cfgs from the destination crate and not the ones from the defining crate [INFO] [stdout] = help: try referring to `impl_error_chain_processed` crate for guidance on how handle this unexpected cfg [INFO] [stdout] = help: the macro `impl_error_chain_processed` may come from an old version of the `error_chain` crate, try updating your dependency with `cargo update -p error_chain` [INFO] [stdout] = note: see for more information about checking conditional configuration [INFO] [stdout] = note: `#[warn(unexpected_cfgs)]` on by default [INFO] [stdout] = note: this warning originates in the macro `impl_error_chain_processed` which comes from the expansion of the macro `error_chain` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `read_id` [INFO] [stdout] --> src/main.rs:143:13 [INFO] [stdout] | [INFO] [stdout] 143 | let read_id: String = read_data.id().to_string(); [INFO] [stdout] | ^^^^^^^ help: if this is intentional, prefix it with an underscore: `_read_id` [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_variables)]` (part of `#[warn(unused)]`) on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `hit` [INFO] [stdout] --> src/main.rs:158:13 [INFO] [stdout] | [INFO] [stdout] 158 | for hit in hits.iter(){ [INFO] [stdout] | ^^^ help: if this is intentional, prefix it with an underscore: `_hit` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: variable does not need to be mutable [INFO] [stdout] --> src/main.rs:156:13 [INFO] [stdout] | [INFO] [stdout] 156 | let mut matches: HashSet<(String, String, usize, usize, String)> = HashSet::new(); [INFO] [stdout] | ----^^^^^^^ [INFO] [stdout] | | [INFO] [stdout] | help: remove this `mut` [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_mut)]` (part of `#[warn(unused)]`) on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: function `hamming_distance` is never used [INFO] [stdout] --> src/main.rs:59:4 [INFO] [stdout] | [INFO] [stdout] 59 | fn hamming_distance(ref_seq: &[char], read_seq: &[char])->(usize, String){ [INFO] [stdout] | ^^^^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(dead_code)]` (part of `#[warn(unused)]`) on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: using `.clone()` on a double reference, which returns `&usize` instead of cloning the inner type [INFO] [stdout] --> src/main.rs:87:110 [INFO] [stdout] | [INFO] [stdout] 87 | ... .filter(|start_pos| start_pos>=&&depth||start_pos.clone()+q_seq.len() src/main.rs:14:1 [INFO] [stdout] | [INFO] [stdout] 14 | / error_chain! { [INFO] [stdout] 15 | | foreign_links { [INFO] [stdout] 16 | | Glob(glob::GlobError); [INFO] [stdout] 17 | | Pattern(glob::PatternError); [INFO] [stdout] 18 | | } [INFO] [stdout] 19 | | } [INFO] [stdout] | |_^ [INFO] [stdout] | [INFO] [stdout] = help: expected names are: `docsrs`, `feature`, and `test` and 31 more [INFO] [stdout] = note: using a cfg inside a macro will use the cfgs from the destination crate and not the ones from the defining crate [INFO] [stdout] = help: try referring to `impl_error_chain_processed` crate for guidance on how handle this unexpected cfg [INFO] [stdout] = help: the macro `impl_error_chain_processed` may come from an old version of the `error_chain` crate, try updating your dependency with `cargo update -p error_chain` [INFO] [stdout] = note: see for more information about checking conditional configuration [INFO] [stdout] = note: `#[warn(unexpected_cfgs)]` on by default [INFO] [stdout] = note: this warning originates in the macro `impl_error_chain_processed` which comes from the expansion of the macro `error_chain` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `read_id` [INFO] [stdout] --> src/main.rs:143:13 [INFO] [stdout] | [INFO] [stdout] 143 | let read_id: String = read_data.id().to_string(); [INFO] [stdout] | ^^^^^^^ help: if this is intentional, prefix it with an underscore: `_read_id` [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_variables)]` (part of `#[warn(unused)]`) on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `hit` [INFO] [stdout] --> src/main.rs:158:13 [INFO] [stdout] | [INFO] [stdout] 158 | for hit in hits.iter(){ [INFO] [stdout] | ^^^ help: if this is intentional, prefix it with an underscore: `_hit` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: variable does not need to be mutable [INFO] [stdout] --> src/main.rs:156:13 [INFO] [stdout] | [INFO] [stdout] 156 | let mut matches: HashSet<(String, String, usize, usize, String)> = HashSet::new(); [INFO] [stdout] | ----^^^^^^^ [INFO] [stdout] | | [INFO] [stdout] | help: remove this `mut` [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_mut)]` (part of `#[warn(unused)]`) on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: function `hamming_distance` is never used [INFO] [stdout] --> src/main.rs:59:4 [INFO] [stdout] | [INFO] [stdout] 59 | fn hamming_distance(ref_seq: &[char], read_seq: &[char])->(usize, String){ [INFO] [stdout] | ^^^^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(dead_code)]` (part of `#[warn(unused)]`) on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: using `.clone()` on a double reference, which returns `&usize` instead of cloning the inner type [INFO] [stdout] --> src/main.rs:87:110 [INFO] [stdout] | [INFO] [stdout] 87 | ... .filter(|start_pos| start_pos>=&&depth||start_pos.clone()+q_seq.len() src/main.rs:14:1 [INFO] [stderr] | [INFO] [stderr] 14 | / error_chain! { [INFO] [stderr] 15 | | foreign_links { [INFO] [stderr] 16 | | Glob(glob::GlobError); [INFO] [stderr] 17 | | Pattern(glob::PatternError); [INFO] [stderr] 18 | | } [INFO] [stderr] 19 | | } [INFO] [stderr] | |_^ [INFO] [stderr] | [INFO] [stderr] = help: expected names are: `docsrs`, `feature`, and `test` and 31 more [INFO] [stderr] = note: using a cfg inside a macro will use the cfgs from the destination crate and not the ones from the defining crate [INFO] [stderr] = help: try referring to `impl_error_chain_processed` crate for guidance on how handle this unexpected cfg [INFO] [stderr] = help: the macro `impl_error_chain_processed` may come from an old version of the `error_chain` crate, try updating your dependency with `cargo update -p error_chain` [INFO] [stderr] = note: see for more information about checking conditional configuration [INFO] [stderr] = note: `#[warn(unexpected_cfgs)]` on by default [INFO] [stderr] = note: this warning originates in the macro `impl_error_chain_processed` which comes from the expansion of the macro `error_chain` (in Nightly builds, run with -Z macro-backtrace for more info) [INFO] [stderr] [INFO] [stderr] warning: unused variable: `read_id` [INFO] [stderr] --> src/main.rs:143:13 [INFO] [stderr] | [INFO] [stderr] 143 | let read_id: String = read_data.id().to_string(); [INFO] [stderr] | ^^^^^^^ help: if this is intentional, prefix it with an underscore: `_read_id` [INFO] [stderr] | [INFO] [stderr] = note: `#[warn(unused_variables)]` (part of `#[warn(unused)]`) on by default [INFO] [stderr] [INFO] [stderr] warning: unused variable: `hit` [INFO] [stderr] --> src/main.rs:158:13 [INFO] [stderr] | [INFO] [stderr] 158 | for hit in hits.iter(){ [INFO] [stderr] | ^^^ help: if this is intentional, prefix it with an underscore: `_hit` [INFO] [stderr] [INFO] [stderr] warning: variable does not need to be mutable [INFO] [stderr] --> src/main.rs:156:13 [INFO] [stderr] | [INFO] [stderr] 156 | let mut matches: HashSet<(String, String, usize, usize, String)> = HashSet::new(); [INFO] [stderr] | ----^^^^^^^ [INFO] [stderr] | | [INFO] [stderr] | help: remove this `mut` [INFO] [stderr] | [INFO] [stderr] = note: `#[warn(unused_mut)]` (part of `#[warn(unused)]`) on by default [INFO] [stderr] [INFO] [stderr] warning: function `hamming_distance` is never used [INFO] [stderr] --> src/main.rs:59:4 [INFO] [stderr] | [INFO] [stderr] 59 | fn hamming_distance(ref_seq: &[char], read_seq: &[char])->(usize, String){ [INFO] [stderr] | ^^^^^^^^^^^^^^^^ [INFO] [stderr] | [INFO] [stderr] = note: `#[warn(dead_code)]` (part of `#[warn(unused)]`) on by default [INFO] [stderr] [INFO] [stderr] warning: using `.clone()` on a double reference, which returns `&usize` instead of cloning the inner type [INFO] [stderr] --> src/main.rs:87:110 [INFO] [stderr] | [INFO] [stderr] 87 | ... .filter(|start_pos| start_pos>=&&depth||start_pos.clone()+q_seq.len()