[INFO] cloning repository https://github.com/pangenome/seqrush [INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/pangenome/seqrush" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fpangenome%2Fseqrush", kill_on_drop: false }` [INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fpangenome%2Fseqrush'... [INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }` [INFO] [stdout] c06bfe15e00d808dfd473641d6a184b547f33225 [INFO] checking pangenome/seqrush against try#c659ee110de67e82444e4b6c8407c1a9af9c2cf6 for pr-145608-1 [INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fpangenome%2Fseqrush" "/workspace/builds/worker-0-tc2/source", kill_on_drop: false }` [INFO] [stderr] Cloning into '/workspace/builds/worker-0-tc2/source'... [INFO] [stderr] done. [INFO] removed /workspace/builds/worker-0-tc2/source/rust-toolchain.toml [INFO] started tweaking git repo https://github.com/pangenome/seqrush [INFO] finished tweaking git repo https://github.com/pangenome/seqrush [INFO] tweaked toml for git repo https://github.com/pangenome/seqrush written to /workspace/builds/worker-0-tc2/source/Cargo.toml [INFO] validating manifest of git repo https://github.com/pangenome/seqrush on toolchain c659ee110de67e82444e4b6c8407c1a9af9c2cf6 [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+c659ee110de67e82444e4b6c8407c1a9af9c2cf6" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] crate git repo https://github.com/pangenome/seqrush already has a lockfile, it will not be regenerated [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+c659ee110de67e82444e4b6c8407c1a9af9c2cf6" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-0-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-0-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:7ad1b28ee6f5f7f699f6cf7015098d6ccdd96d6f2d78dd06228f5b4c9faf309c" "/opt/rustwide/cargo-home/bin/cargo" "+c659ee110de67e82444e4b6c8407c1a9af9c2cf6" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] 3fb850fc75f423fa751a82b09a52bc3350de230017d72a1877937f342ac14ac6 [INFO] running `Command { std: "docker" "start" "-a" "3fb850fc75f423fa751a82b09a52bc3350de230017d72a1877937f342ac14ac6", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "3fb850fc75f423fa751a82b09a52bc3350de230017d72a1877937f342ac14ac6", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "3fb850fc75f423fa751a82b09a52bc3350de230017d72a1877937f342ac14ac6", kill_on_drop: false }` [INFO] [stdout] 3fb850fc75f423fa751a82b09a52bc3350de230017d72a1877937f342ac14ac6 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-0-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-0-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:7ad1b28ee6f5f7f699f6cf7015098d6ccdd96d6f2d78dd06228f5b4c9faf309c" "/opt/rustwide/cargo-home/bin/cargo" "+c659ee110de67e82444e4b6c8407c1a9af9c2cf6" "check" "--frozen" "--all" "--all-targets" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] 245c8a20305987e094065a5e5e76094b15a2cda9e2a975dc947c260001c1f751 [INFO] running `Command { std: "docker" "start" "-a" "245c8a20305987e094065a5e5e76094b15a2cda9e2a975dc947c260001c1f751", kill_on_drop: false }` [INFO] [stderr] Compiling proc-macro2 v1.0.95 [INFO] [stderr] Compiling libc v0.2.174 [INFO] [stderr] Checking utf8parse v0.2.2 [INFO] [stderr] Compiling radium v0.7.0 [INFO] [stderr] Checking is_terminal_polyfill v1.70.1 [INFO] [stderr] Checking anstyle v1.0.11 [INFO] [stderr] Checking crossbeam-epoch v0.9.18 [INFO] [stderr] Checking anstyle-query v1.1.3 [INFO] [stderr] Checking colorchoice v1.0.4 [INFO] [stderr] Compiling serde v1.0.219 [INFO] [stderr] Checking anstyle-parse v0.2.7 [INFO] [stderr] Compiling lib_wfa2 v0.1.0 (https://github.com/AndreaGuarracino/lib_wfa2#879c59ad) [INFO] [stderr] Checking strsim v0.11.1 [INFO] [stderr] Checking clap_lex v0.7.5 [INFO] [stderr] Checking anstream v0.6.19 [INFO] [stderr] Checking tap v1.0.1 [INFO] [stderr] Checking crossbeam-deque v0.8.6 [INFO] [stderr] Compiling serde_json v1.0.140 [INFO] [stderr] Checking wyz v0.5.1 [INFO] [stderr] error: failed to run custom build command for `lib_wfa2 v0.1.0 (https://github.com/AndreaGuarracino/lib_wfa2#879c59ad)` [INFO] [stderr] note: To improve backtraces for build dependencies, set the CARGO_PROFILE_DEV_BUILD_OVERRIDE_DEBUG=true environment variable to enable debug information generation. [INFO] [stderr] [INFO] [stderr] Caused by: [INFO] [stderr] process didn't exit successfully: `/opt/rustwide/target/debug/build/lib_wfa2-3b99c5cd7cf8bf66/build-script-build` (exit status: 101) [INFO] [stderr] --- stderr [INFO] [stderr] [INFO] [stderr] thread 'main' (204) panicked at /opt/rustwide/cargo-home/git/checkouts/lib_wfa2-9e554f8770e7b94e/879c59a/build.rs:90:9: [INFO] [stderr] Failed to build WFA2-lib: Make failed: mkdir: cannot create directory 'bin': Read-only file system [INFO] [stderr] mkdir: cannot create directory 'build': Read-only file system [INFO] [stderr] mkdir: cannot create directory 'build': Read-only file system [INFO] [stderr] mkdir: cannot create directory 'lib': Read-only file system [INFO] [stderr] make: *** [Makefile:70: setup] Error 1 [INFO] [stderr] [INFO] [stderr] stack backtrace: [INFO] [stderr] 0: 0x5e25d27c2312 - std::backtrace_rs::backtrace::libunwind::trace::hbea4c4361d976d9f [INFO] [stderr] at /rustc/c659ee110de67e82444e4b6c8407c1a9af9c2cf6/library/std/src/../../backtrace/src/backtrace/libunwind.rs:117:9 [INFO] [stderr] 1: 0x5e25d27c2312 - std::backtrace_rs::backtrace::trace_unsynchronized::h24ac09a275696d40 [INFO] [stderr] at /rustc/c659ee110de67e82444e4b6c8407c1a9af9c2cf6/library/std/src/../../backtrace/src/backtrace/mod.rs:66:14 [INFO] [stderr] 2: 0x5e25d27c2312 - std::sys::backtrace::_print_fmt::h082519eb085fbf7d [INFO] [stderr] at /rustc/c659ee110de67e82444e4b6c8407c1a9af9c2cf6/library/std/src/sys/backtrace.rs:66:9 [INFO] [stderr] 3: 0x5e25d27c2312 - ::fmt::h2cd9656577aefc6d [INFO] [stderr] at /rustc/c659ee110de67e82444e4b6c8407c1a9af9c2cf6/library/std/src/sys/backtrace.rs:39:26 [INFO] [stderr] 4: 0x5e25d27dffef - core::fmt::rt::Argument::fmt::h12bc9925885d5110 [INFO] [stderr] at /rustc/c659ee110de67e82444e4b6c8407c1a9af9c2cf6/library/core/src/fmt/rt.rs:173:76 [INFO] [stderr] 5: 0x5e25d27dffef - core::fmt::write::h5bf12ce417f28db4 [INFO] [stderr] at /rustc/c659ee110de67e82444e4b6c8407c1a9af9c2cf6/library/core/src/fmt/mod.rs:1468:25 [INFO] [stderr] 6: 0x5e25d27b3f13 - std::io::default_write_fmt::h6670289da6979956 [INFO] [stderr] at /rustc/c659ee110de67e82444e4b6c8407c1a9af9c2cf6/library/std/src/io/mod.rs:639:11 [INFO] [stderr] 7: 0x5e25d27b3f13 - std::io::Write::write_fmt::h279920046451d90f [INFO] [stderr] at /rustc/c659ee110de67e82444e4b6c8407c1a9af9c2cf6/library/std/src/io/mod.rs:1954:13 [INFO] [stderr] 8: 0x5e25d27c2452 - std::sys::backtrace::BacktraceLock::print::h80e4c589a4f701f2 [INFO] [stderr] at /rustc/c659ee110de67e82444e4b6c8407c1a9af9c2cf6/library/std/src/sys/backtrace.rs:42:9 [INFO] [stderr] 9: 0x5e25d27b191c - std::panicking::default_hook::{{closure}}::h15ddaac16a5a7446 [INFO] [stderr] at /rustc/c659ee110de67e82444e4b6c8407c1a9af9c2cf6/library/std/src/panicking.rs:301:27 [INFO] [stderr] 10: 0x5e25d27b175e - std::panicking::default_hook::hb187b31075710008 [INFO] [stderr] at /rustc/c659ee110de67e82444e4b6c8407c1a9af9c2cf6/library/std/src/panicking.rs:328:9 [INFO] [stderr] 11: 0x5e25d27b0e70 - std::panicking::panic_with_hook::h13a15813804ea1a7 [INFO] [stderr] at /rustc/c659ee110de67e82444e4b6c8407c1a9af9c2cf6/library/std/src/panicking.rs:834:13 [INFO] [stderr] 12: 0x5e25d27c250a - std::panicking::panic_handler::{{closure}}::h6e8a7899819f7e8e [INFO] [stderr] at /rustc/c659ee110de67e82444e4b6c8407c1a9af9c2cf6/library/std/src/panicking.rs:707:13 [INFO] [stderr] 13: 0x5e25d27c2469 - std::sys::backtrace::__rust_end_short_backtrace::h9ee05d6aba5d3318 [INFO] [stderr] at /rustc/c659ee110de67e82444e4b6c8407c1a9af9c2cf6/library/std/src/sys/backtrace.rs:174:18 [INFO] [stderr] 14: 0x5e25d27b108d - __rustc[106fd6a171f8100f]::rust_begin_unwind [INFO] [stderr] at /rustc/c659ee110de67e82444e4b6c8407c1a9af9c2cf6/library/std/src/panicking.rs:698:5 [INFO] [stderr] 15: 0x5e25d27e3920 - core::panicking::panic_fmt::h1f7e7fb8eac469a1 [INFO] [stderr] at /rustc/c659ee110de67e82444e4b6c8407c1a9af9c2cf6/library/core/src/panicking.rs:75:14 [INFO] [stderr] 16: 0x5e25d2795c17 - build_script_build::main::hc4a3d31bec380051 [INFO] [stderr] 17: 0x5e25d279a343 - core::ops::function::FnOnce::call_once::h50593751cbcfa234 [INFO] [stderr] 18: 0x5e25d279ae16 - std::sys::backtrace::__rust_begin_short_backtrace::hefa23d173af1cd66 [INFO] [stderr] 19: 0x5e25d279adc9 - std::rt::lang_start::{{closure}}::h3c250373651b5eac [INFO] [stderr] 20: 0x5e25d27c2c90 - core::ops::function::impls:: for &F>::call_once::hf041d389344f56bb [INFO] [stderr] at /rustc/c659ee110de67e82444e4b6c8407c1a9af9c2cf6/library/core/src/ops/function.rs:290:21 [INFO] [stderr] 21: 0x5e25d27c2c90 - std::panicking::catch_unwind::do_call::hcc878ac5325385ca [INFO] [stderr] at /rustc/c659ee110de67e82444e4b6c8407c1a9af9c2cf6/library/std/src/panicking.rs:590:40 [INFO] [stderr] 22: 0x5e25d27c2c90 - std::panicking::catch_unwind::h19b909e5851b1ecc [INFO] [stderr] at /rustc/c659ee110de67e82444e4b6c8407c1a9af9c2cf6/library/std/src/panicking.rs:553:19 [INFO] [stderr] 23: 0x5e25d27c2c90 - std::panic::catch_unwind::hf7b61f0d85beddf7 [INFO] [stderr] at /rustc/c659ee110de67e82444e4b6c8407c1a9af9c2cf6/library/std/src/panic.rs:359:14 [INFO] [stderr] 24: 0x5e25d27c2c90 - std::rt::lang_start_internal::{{closure}}::hf4a2cf218490b1eb [INFO] [stderr] at /rustc/c659ee110de67e82444e4b6c8407c1a9af9c2cf6/library/std/src/rt.rs:175:24 [INFO] [stderr] 25: 0x5e25d27c2c90 - std::panicking::catch_unwind::do_call::h87d50ac29e3f2ea1 [INFO] [stderr] at /rustc/c659ee110de67e82444e4b6c8407c1a9af9c2cf6/library/std/src/panicking.rs:590:40 [INFO] [stderr] 26: 0x5e25d27c2c90 - std::panicking::catch_unwind::h74fa98d980427683 [INFO] [stderr] at /rustc/c659ee110de67e82444e4b6c8407c1a9af9c2cf6/library/std/src/panicking.rs:553:19 [INFO] [stderr] 27: 0x5e25d27c2c90 - std::panic::catch_unwind::hea88d035b3883372 [INFO] [stderr] at /rustc/c659ee110de67e82444e4b6c8407c1a9af9c2cf6/library/std/src/panic.rs:359:14 [INFO] [stderr] 28: 0x5e25d27c2c90 - std::rt::lang_start_internal::h9835821d1cda1ad4 [INFO] [stderr] at /rustc/c659ee110de67e82444e4b6c8407c1a9af9c2cf6/library/std/src/rt.rs:171:5 [INFO] [stderr] 29: 0x5e25d279ae01 - std::rt::lang_start::h55dd9fd3bb378973 [INFO] [stderr] 30: 0x5e25d27988d5 - main [INFO] [stderr] 31: 0x77ef6efac1ca - [INFO] [stderr] 32: 0x77ef6efac28b - __libc_start_main [INFO] [stderr] 33: 0x5e25d2795265 - _start [INFO] [stderr] 34: 0x0 - [INFO] [stderr] warning: build failed, waiting for other jobs to finish... [INFO] running `Command { std: "docker" "inspect" "245c8a20305987e094065a5e5e76094b15a2cda9e2a975dc947c260001c1f751", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "245c8a20305987e094065a5e5e76094b15a2cda9e2a975dc947c260001c1f751", kill_on_drop: false }` [INFO] [stdout] 245c8a20305987e094065a5e5e76094b15a2cda9e2a975dc947c260001c1f751