[INFO] fetching crate exon-bcf 0.32.4... [INFO] checking exon-bcf-0.32.4 against master#8c32e313cccf7df531e2d49ffb8227bb92304aee for pr-145608-1 [INFO] extracting crate exon-bcf 0.32.4 into /workspace/builds/worker-5-tc1/source [INFO] started tweaking crates.io crate exon-bcf 0.32.4 [INFO] finished tweaking crates.io crate exon-bcf 0.32.4 [INFO] tweaked toml for crates.io crate exon-bcf 0.32.4 written to /workspace/builds/worker-5-tc1/source/Cargo.toml [INFO] validating manifest of crates.io crate exon-bcf 0.32.4 on toolchain 8c32e313cccf7df531e2d49ffb8227bb92304aee [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+8c32e313cccf7df531e2d49ffb8227bb92304aee" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+8c32e313cccf7df531e2d49ffb8227bb92304aee" "generate-lockfile" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] Updating crates.io index [INFO] [stderr] Locking 303 packages to latest compatible versions [INFO] [stderr] Adding arrow v53.4.1 (available: v56.1.0) [INFO] [stderr] Adding async-compression v0.4.19 (available: v0.4.30) [INFO] [stderr] Adding chrono v0.4.39 (available: v0.4.41) [INFO] [stderr] Adding noodles v0.86.0 (available: v0.101.0) [INFO] [stderr] Adding object_store v0.11.2 (available: v0.12.3) [INFO] [stderr] Adding zstd-safe v7.2.1 (available: v7.2.4) [INFO] [stderr] Adding zstd-sys v2.0.13+zstd.1.5.6 (available: v2.0.15+zstd.1.5.7) [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+8c32e313cccf7df531e2d49ffb8227bb92304aee" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] Downloading crates ... [INFO] [stderr] Downloaded noodles-csi v0.41.0 [INFO] [stderr] Downloaded noodles-vcf v0.69.0 [INFO] [stderr] Downloaded datafusion-common-runtime v43.0.0 [INFO] [stderr] Downloaded arrow-row v53.4.1 [INFO] [stderr] Downloaded datafusion-catalog v43.0.0 [INFO] [stderr] Downloaded datafusion-functions-window v43.0.0 [INFO] [stderr] Downloaded datafusion-physical-optimizer v43.0.0 [INFO] [stderr] Downloaded arrow-json v53.4.1 [INFO] [stderr] Downloaded datafusion-functions-aggregate v43.0.0 [INFO] [stderr] Downloaded arrow-ipc v53.4.1 [INFO] [stderr] Downloaded datafusion-physical-expr v43.0.0 [INFO] [stderr] Downloaded datafusion-common v43.0.0 [INFO] [stderr] Downloaded sqlparser v0.51.0 [INFO] [stderr] Downloaded noodles-cram v0.72.0 [INFO] [stderr] Downloaded parquet v53.4.1 [INFO] [stderr] Downloaded arrow-buffer v53.4.1 [INFO] [stderr] Downloaded noodles-sam v0.67.0 [INFO] [stderr] Downloaded datafusion-sql v43.0.0 [INFO] [stderr] Downloaded noodles-bcf v0.65.0 [INFO] [stderr] Downloaded datafusion-expr v43.0.0 [INFO] [stderr] Downloaded datafusion-optimizer v43.0.0 [INFO] [stderr] Downloaded arrow-array v53.4.1 [INFO] [stderr] Downloaded arrow v53.4.1 [INFO] [stderr] Downloaded arrow-cast v53.4.1 [INFO] [stderr] Downloaded datafusion-functions v43.0.0 [INFO] [stderr] Downloaded datafusion v43.0.0 [INFO] [stderr] Downloaded noodles-bam v0.71.0 [INFO] [stderr] Downloaded arrow-data v53.4.1 [INFO] [stderr] Downloaded noodles-gff v0.40.0 [INFO] [stderr] Downloaded datafusion-physical-plan v43.0.0 [INFO] [stderr] Downloaded arrow-arith v53.4.1 [INFO] [stderr] Downloaded arrow-schema v53.4.1 [INFO] [stderr] Downloaded arrow-select v53.4.1 [INFO] [stderr] Downloaded noodles-fasta v0.46.0 [INFO] [stderr] Downloaded snafu-derive v0.8.9 [INFO] [stderr] Downloaded datafusion-execution v43.0.0 [INFO] [stderr] Downloaded arrow-csv v53.4.1 [INFO] [stderr] Downloaded arrow-string v53.4.1 [INFO] [stderr] Downloaded exon-common v0.32.4 [INFO] [stderr] Downloaded noodles-fastq v0.16.0 [INFO] [stderr] Downloaded snafu v0.8.9 [INFO] [stderr] Downloaded datafusion-functions-nested v43.0.0 [INFO] [stderr] Downloaded datafusion-functions-window-common v43.0.0 [INFO] [stderr] Downloaded arrow-ord v53.4.1 [INFO] [stderr] Downloaded datafusion-expr-common v43.0.0 [INFO] [stderr] Downloaded exon-vcf v0.32.4 [INFO] [stderr] Downloaded object_store v0.11.2 [INFO] [stderr] Downloaded datafusion-functions-aggregate-common v43.0.0 [INFO] [stderr] Downloaded datafusion-physical-expr-common v43.0.0 [INFO] [stderr] Downloaded sqlparser_derive v0.2.2 [INFO] [stderr] Downloaded noodles-bgzf v0.34.0 [INFO] [stderr] Downloaded noodles-core v0.15.0 [INFO] [stderr] Downloaded noodles-tabix v0.47.0 [INFO] [stderr] Downloaded noodles v0.86.0 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-5-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-5-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:7ad1b28ee6f5f7f699f6cf7015098d6ccdd96d6f2d78dd06228f5b4c9faf309c" "/opt/rustwide/cargo-home/bin/cargo" "+8c32e313cccf7df531e2d49ffb8227bb92304aee" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] ea8461a2d007239cfbbd6f7dfc00ee809ea9d65c7a56663ed75417fa2eb98b74 [INFO] running `Command { std: "docker" "start" "-a" "ea8461a2d007239cfbbd6f7dfc00ee809ea9d65c7a56663ed75417fa2eb98b74", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "ea8461a2d007239cfbbd6f7dfc00ee809ea9d65c7a56663ed75417fa2eb98b74", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "ea8461a2d007239cfbbd6f7dfc00ee809ea9d65c7a56663ed75417fa2eb98b74", kill_on_drop: false }` [INFO] [stdout] ea8461a2d007239cfbbd6f7dfc00ee809ea9d65c7a56663ed75417fa2eb98b74 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-5-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-5-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:7ad1b28ee6f5f7f699f6cf7015098d6ccdd96d6f2d78dd06228f5b4c9faf309c" "/opt/rustwide/cargo-home/bin/cargo" "+8c32e313cccf7df531e2d49ffb8227bb92304aee" "check" "--frozen" "--all" "--all-targets" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] e178ab75328ef748ec6a15bbacd349fa53f5bd73c4464b0df61d90e3af8e0b43 [INFO] running `Command { std: "docker" "start" "-a" "e178ab75328ef748ec6a15bbacd349fa53f5bd73c4464b0df61d90e3af8e0b43", kill_on_drop: false }` [INFO] [stderr] Checking num-integer v0.1.46 [INFO] [stderr] Checking half v2.6.0 [INFO] [stderr] Checking chrono v0.4.39 [INFO] [stderr] Checking ahash v0.8.12 [INFO] [stderr] Checking arrow-schema v53.4.1 [INFO] [stderr] Checking tokio v1.47.1 [INFO] [stderr] Checking serde v1.0.219 [INFO] [stderr] Compiling zstd-sys v2.0.13+zstd.1.5.6 [INFO] [stderr] Checking comfy-table v7.2.0 [INFO] [stderr] Compiling flatbuffers v24.12.23 [INFO] [stderr] Checking parking_lot_core v0.9.11 [INFO] [stderr] Checking num-bigint v0.4.6 [INFO] [stderr] Checking num-iter v0.1.45 [INFO] [stderr] Checking twox-hash v2.1.2 [INFO] [stderr] Checking lz4_flex v0.11.5 [INFO] [stderr] Compiling snafu-derive v0.8.9 [INFO] [stderr] Compiling snap v1.1.1 [INFO] [stderr] Checking parking_lot v0.12.4 [INFO] [stderr] Checking ordered-float v2.10.1 [INFO] [stderr] Checking integer-encoding v3.0.4 [INFO] [stderr] Checking hashbrown v0.14.5 [INFO] [stderr] Checking thrift v0.17.0 [INFO] [stderr] Checking chrono-tz v0.10.4 [INFO] [stderr] Checking brotli v7.0.0 [INFO] [stderr] Checking num-rational v0.4.2 [INFO] [stderr] Checking twox-hash v1.6.3 [INFO] [stderr] Compiling sqlparser_derive v0.2.2 [INFO] [stderr] Checking num v0.4.3 [INFO] [stderr] Checking arrow-buffer v53.4.1 [INFO] [stderr] Compiling seq-macro v0.3.6 [INFO] [stderr] Checking arrow-data v53.4.1 [INFO] [stderr] Checking snafu v0.8.9 [INFO] [stderr] Checking sqlparser v0.51.0 [INFO] [stderr] Checking url v2.5.7 [INFO] [stderr] Checking csv v1.3.1 [INFO] [stderr] Checking serde_json v1.0.143 [INFO] [stderr] Compiling strum_macros v0.26.4 [INFO] [stderr] Checking rustix v1.0.8 [INFO] [stderr] Checking object_store v0.11.2 [INFO] [stderr] Checking dashmap v6.1.0 [INFO] [stderr] Checking tokio-util v0.7.16 [INFO] [stderr] Compiling bzip2-sys v0.1.13+1.0.8 [INFO] [stderr] Checking crossbeam-channel v0.5.15 [INFO] [stderr] Checking tempfile v3.21.0 [INFO] [stderr] Compiling lzma-sys v0.1.20 [INFO] [stderr] Checking strum v0.26.3 [INFO] [stderr] Compiling blake3 v1.8.2 [INFO] [stderr] Checking bstr v1.12.0 [INFO] [stderr] Checking noodles-bgzf v0.34.0 [INFO] [stderr] Checking datafusion-common-runtime v43.0.0 [INFO] [stderr] Checking sha2 v0.10.9 [INFO] [stderr] Checking blake2 v0.10.6 [INFO] [stderr] Checking noodles-core v0.15.0 [INFO] [stderr] Checking md-5 v0.10.6 [INFO] [stderr] Checking uuid v1.18.1 [INFO] [stderr] Checking noodles-csi v0.41.0 [INFO] [stderr] Checking bzip2 v0.5.2 [INFO] [stderr] Checking bzip2 v0.4.4 [INFO] [stderr] Checking noodles-tabix v0.47.0 [INFO] [stderr] Checking noodles-vcf v0.69.0 [INFO] [stderr] Checking arrow-array v53.4.1 [INFO] [stderr] Checking xz2 v0.1.7 [INFO] [stderr] Compiling zstd-safe v7.2.1 [INFO] [stderr] Checking zstd v0.13.3 [INFO] [stderr] Checking noodles-bcf v0.65.0 [INFO] [stderr] Checking async-compression v0.4.19 [INFO] [stderr] Checking arrow-select v53.4.1 [INFO] [stderr] Checking arrow-row v53.4.1 [INFO] [stderr] Checking arrow-arith v53.4.1 [INFO] [stderr] Checking noodles v0.86.0 [INFO] [stderr] Checking arrow-cast v53.4.1 [INFO] [stderr] Checking arrow-ord v53.4.1 [INFO] [stderr] Checking arrow-string v53.4.1 [INFO] [stderr] Checking arrow-ipc v53.4.1 [INFO] [stderr] Checking arrow-csv v53.4.1 [INFO] [stderr] Checking arrow-json v53.4.1 [INFO] [stderr] Checking arrow v53.4.1 [INFO] [stderr] Checking parquet v53.4.1 [INFO] [stderr] Checking datafusion-common v43.0.0 [INFO] [stderr] Checking datafusion-expr-common v43.0.0 [INFO] [stderr] Checking datafusion-physical-expr-common v43.0.0 [INFO] [stderr] Checking datafusion-functions-window-common v43.0.0 [INFO] [stderr] Checking datafusion-functions-aggregate-common v43.0.0 [INFO] [stderr] Checking datafusion-expr v43.0.0 [INFO] [stderr] Checking datafusion-physical-expr v43.0.0 [INFO] [stderr] Checking datafusion-execution v43.0.0 [INFO] [stderr] Checking datafusion-sql v43.0.0 [INFO] [stderr] Checking datafusion-functions v43.0.0 [INFO] [stderr] Checking datafusion-physical-plan v43.0.0 [INFO] [stderr] Checking datafusion-functions-aggregate v43.0.0 [INFO] [stderr] Checking datafusion-functions-window v43.0.0 [INFO] [stderr] Checking datafusion-optimizer v43.0.0 [INFO] [stderr] Checking datafusion-functions-nested v43.0.0 [INFO] [stderr] Checking datafusion-physical-optimizer v43.0.0 [INFO] [stderr] Checking datafusion-catalog v43.0.0 [INFO] [stderr] Checking datafusion v43.0.0 [INFO] [stderr] Checking exon-common v0.32.4 [INFO] [stderr] Checking exon-vcf v0.32.4 [INFO] [stderr] Checking exon-bcf v0.32.4 (/opt/rustwide/workdir) [INFO] [stderr] Finished `dev` profile [unoptimized + debuginfo] target(s) in 2m 23s [INFO] running `Command { std: "docker" "inspect" "e178ab75328ef748ec6a15bbacd349fa53f5bd73c4464b0df61d90e3af8e0b43", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "e178ab75328ef748ec6a15bbacd349fa53f5bd73c4464b0df61d90e3af8e0b43", kill_on_drop: false }` [INFO] [stdout] e178ab75328ef748ec6a15bbacd349fa53f5bd73c4464b0df61d90e3af8e0b43