[INFO] fetching crate biodiff-align 1.2.1-preview... [INFO] checking biodiff-align-1.2.1-preview against master#8c32e313cccf7df531e2d49ffb8227bb92304aee for pr-145608-1 [INFO] extracting crate biodiff-align 1.2.1-preview into /workspace/builds/worker-7-tc1/source [INFO] started tweaking crates.io crate biodiff-align 1.2.1-preview [INFO] finished tweaking crates.io crate biodiff-align 1.2.1-preview [INFO] tweaked toml for crates.io crate biodiff-align 1.2.1-preview written to /workspace/builds/worker-7-tc1/source/Cargo.toml [INFO] validating manifest of crates.io crate biodiff-align 1.2.1-preview on toolchain 8c32e313cccf7df531e2d49ffb8227bb92304aee [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+8c32e313cccf7df531e2d49ffb8227bb92304aee" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+8c32e313cccf7df531e2d49ffb8227bb92304aee" "generate-lockfile" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] Updating crates.io index [INFO] [stderr] Locking 90 packages to latest compatible versions [INFO] [stderr] Adding bio v1.6.0 (available: v2.3.0) [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+8c32e313cccf7df531e2d49ffb8227bb92304aee" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] [stderr] Downloading crates ... [INFO] [stderr] Downloaded triple_accel v0.4.0 [INFO] [stderr] Downloaded newtype_derive v0.1.6 [INFO] [stderr] Downloaded editdistancek v1.0.2 [INFO] [stderr] Downloaded multimap v0.9.1 [INFO] [stderr] Downloaded custom_derive v0.1.7 [INFO] [stderr] Downloaded bio-types v1.0.4 [INFO] [stderr] Downloaded itertools-num v0.1.3 [INFO] [stderr] Downloaded bio v1.6.0 [INFO] [stderr] Downloaded statrs v0.16.1 [INFO] [stderr] Downloaded biodiff-wfa2-sys v2.3.5 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-7-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-7-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:7ad1b28ee6f5f7f699f6cf7015098d6ccdd96d6f2d78dd06228f5b4c9faf309c" "/opt/rustwide/cargo-home/bin/cargo" "+8c32e313cccf7df531e2d49ffb8227bb92304aee" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] 98e0876367e47c34e58c8d7d50db2d4d1cf94ae0f4d7e2b14a1bbf4694426c3e [INFO] running `Command { std: "docker" "start" "-a" "98e0876367e47c34e58c8d7d50db2d4d1cf94ae0f4d7e2b14a1bbf4694426c3e", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "98e0876367e47c34e58c8d7d50db2d4d1cf94ae0f4d7e2b14a1bbf4694426c3e", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "98e0876367e47c34e58c8d7d50db2d4d1cf94ae0f4d7e2b14a1bbf4694426c3e", kill_on_drop: false }` [INFO] [stdout] 98e0876367e47c34e58c8d7d50db2d4d1cf94ae0f4d7e2b14a1bbf4694426c3e [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-7-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-7-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:7ad1b28ee6f5f7f699f6cf7015098d6ccdd96d6f2d78dd06228f5b4c9faf309c" "/opt/rustwide/cargo-home/bin/cargo" "+8c32e313cccf7df531e2d49ffb8227bb92304aee" "check" "--frozen" "--all" "--all-targets" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] 482dd29bf64e6cb72ee27f52478631aa0dc51365104182d54839d97179659ed6 [INFO] running `Command { std: "docker" "start" "-a" "482dd29bf64e6cb72ee27f52478631aa0dc51365104182d54839d97179659ed6", kill_on_drop: false }` [INFO] [stderr] Compiling syn v2.0.106 [INFO] [stderr] Compiling matrixmultiply v0.3.10 [INFO] [stderr] Checking bytemuck v1.23.2 [INFO] [stderr] Compiling cmake v0.1.54 [INFO] [stderr] Checking num-integer v0.1.46 [INFO] [stderr] Checking num-complex v0.4.6 [INFO] [stderr] Checking approx v0.5.1 [INFO] [stderr] Compiling nalgebra-macros v0.1.0 [INFO] [stderr] Compiling newtype_derive v0.1.6 [INFO] [stderr] Checking fixedbitset v0.4.2 [INFO] [stderr] Checking itertools v0.11.0 [INFO] [stderr] Checking rand_distr v0.4.3 [INFO] [stderr] Checking ordered-float v3.9.2 [INFO] [stderr] Checking itertools-num v0.1.3 [INFO] [stderr] Checking strum v0.25.0 [INFO] [stderr] Checking bytecount v0.6.9 [INFO] [stderr] Checking triple_accel v0.4.0 [INFO] [stderr] Checking editdistancek v1.0.2 [INFO] [stderr] Checking custom_derive v0.1.7 [INFO] [stderr] Checking safe_arch v0.7.4 [INFO] [stderr] Checking num-rational v0.4.2 [INFO] [stderr] Checking petgraph v0.6.5 [INFO] [stderr] Compiling biodiff-wfa2-sys v2.3.5 [INFO] [stderr] Checking ndarray v0.15.6 [INFO] [stderr] Checking wide v0.7.33 [INFO] [stderr] Checking simba v0.6.0 [INFO] [stderr] Compiling serde_derive v1.0.219 [INFO] [stderr] Compiling thiserror-impl v1.0.69 [INFO] [stderr] Compiling enum-map-derive v0.17.0 [INFO] [stderr] Compiling strum_macros v0.26.4 [INFO] [stderr] Compiling derive-new v0.6.0 [INFO] [stderr] Compiling strum_macros v0.25.3 [INFO] [stderr] Checking enum-map v2.7.3 [INFO] [stderr] Checking thiserror v1.0.69 [INFO] [stderr] Checking bio-types v1.0.4 [INFO] [stderr] Checking serde v1.0.219 [INFO] [stderr] Checking nalgebra v0.29.0 [INFO] [stderr] Checking bv v0.11.1 [INFO] [stderr] Checking multimap v0.9.1 [INFO] [stderr] Checking csv v1.3.1 [INFO] [stderr] Checking vec_map v0.8.2 [INFO] [stderr] Checking statrs v0.16.1 [INFO] [stderr] Checking bio v1.6.0 [INFO] [stderr] Checking biodiff-align v1.2.1-preview (/opt/rustwide/workdir) [INFO] [stderr] Finished `dev` profile [unoptimized + debuginfo] target(s) in 25.84s [INFO] running `Command { std: "docker" "inspect" "482dd29bf64e6cb72ee27f52478631aa0dc51365104182d54839d97179659ed6", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "482dd29bf64e6cb72ee27f52478631aa0dc51365104182d54839d97179659ed6", kill_on_drop: false }` [INFO] [stdout] 482dd29bf64e6cb72ee27f52478631aa0dc51365104182d54839d97179659ed6