[INFO] cloning repository https://github.com/weinstockj/parquet2bcf
[INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/weinstockj/parquet2bcf" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fweinstockj%2Fparquet2bcf", kill_on_drop: false }`
[INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fweinstockj%2Fparquet2bcf'...
[INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }`
[INFO] [stdout] f2210936bda5d2455fae5188aca018708dbf0cf0
[INFO] checking weinstockj/parquet2bcf against master#8c32e313cccf7df531e2d49ffb8227bb92304aee for pr-145608-1
[INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fweinstockj%2Fparquet2bcf" "/workspace/builds/worker-3-tc1/source", kill_on_drop: false }`
[INFO] [stderr] Cloning into '/workspace/builds/worker-3-tc1/source'...
[INFO] [stderr] done.
[INFO] started tweaking git repo https://github.com/weinstockj/parquet2bcf
[INFO] finished tweaking git repo https://github.com/weinstockj/parquet2bcf
[INFO] tweaked toml for git repo https://github.com/weinstockj/parquet2bcf written to /workspace/builds/worker-3-tc1/source/Cargo.toml
[INFO] validating manifest of git repo https://github.com/weinstockj/parquet2bcf on toolchain 8c32e313cccf7df531e2d49ffb8227bb92304aee
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+8c32e313cccf7df531e2d49ffb8227bb92304aee" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] crate git repo https://github.com/weinstockj/parquet2bcf already has a lockfile, it will not be regenerated
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+8c32e313cccf7df531e2d49ffb8227bb92304aee" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] [stderr]     Updating crates.io index
[INFO] [stderr]  Downloading crates ...
[INFO] [stderr]   Downloaded fs-utils v1.1.4
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[INFO] [stderr]   Downloaded planus v0.3.1
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[INFO] [stderr]   Downloaded polars-utils v0.45.1
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[INFO] [stderr]   Downloaded rust-htslib v0.49.0
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[INFO] [stderr]   Downloaded polars-mem-engine v0.45.1
[INFO] [stderr]   Downloaded polars-lazy v0.45.1
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[INFO] [stderr]   Downloaded curl-sys v0.4.78+curl-8.11.0
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[INFO] [stderr]   Downloaded windows v0.57.0
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:7ad1b28ee6f5f7f699f6cf7015098d6ccdd96d6f2d78dd06228f5b4c9faf309c" "/opt/rustwide/cargo-home/bin/cargo" "+8c32e313cccf7df531e2d49ffb8227bb92304aee" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] [stdout] d7c5566934c46ec6441a89a92005337e238059a16417a2e931574fe9cdfc6100
[INFO] running `Command { std: "docker" "start" "-a" "d7c5566934c46ec6441a89a92005337e238059a16417a2e931574fe9cdfc6100", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "d7c5566934c46ec6441a89a92005337e238059a16417a2e931574fe9cdfc6100", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "d7c5566934c46ec6441a89a92005337e238059a16417a2e931574fe9cdfc6100", kill_on_drop: false }`
[INFO] [stdout] d7c5566934c46ec6441a89a92005337e238059a16417a2e931574fe9cdfc6100
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:7ad1b28ee6f5f7f699f6cf7015098d6ccdd96d6f2d78dd06228f5b4c9faf309c" "/opt/rustwide/cargo-home/bin/cargo" "+8c32e313cccf7df531e2d49ffb8227bb92304aee" "check" "--frozen" "--all" "--all-targets" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] 154c9dc1c51ae2d521de2218b9799c401be91cf003a6d0fb671640dbfc5f30e0
[INFO] running `Command { std: "docker" "start" "-a" "154c9dc1c51ae2d521de2218b9799c401be91cf003a6d0fb671640dbfc5f30e0", kill_on_drop: false }`
[INFO] [stderr]    Compiling libc v0.2.168
[INFO] [stderr]    Compiling regex-syntax v0.8.5
[INFO] [stderr]    Compiling libm v0.2.11
[INFO] [stderr]    Compiling num-traits v0.2.19
[INFO] [stderr]    Compiling serde v1.0.216
[INFO] [stderr]    Compiling syn v2.0.90
[INFO] [stderr]     Checking regex-automata v0.4.9
[INFO] [stderr]    Compiling phf_shared v0.11.2
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[INFO] [stderr]     Checking rayon v1.10.0
[INFO] [stderr]    Compiling phf_generator v0.11.2
[INFO] [stderr]    Compiling target-features v0.1.6
[INFO] [stderr]     Checking array-init-cursor v0.2.0
[INFO] [stderr]     Checking allocator-api2 v0.2.21
[INFO] [stderr]    Compiling jobserver v0.1.32
[INFO] [stderr]     Checking getrandom v0.2.15
[INFO] [stderr]     Checking rand_core v0.6.4
[INFO] [stderr]    Compiling cc v1.2.4
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[INFO] [stderr]    Compiling phf_codegen v0.11.2
[INFO] [stderr]     Checking foldhash v0.1.3
[INFO] [stderr]    Compiling syn v1.0.109
[INFO] [stderr]     Checking parking_lot_core v0.9.10
[INFO] [stderr]     Checking castaway v0.2.3
[INFO] [stderr]    Compiling polars-utils v0.45.1
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[INFO] [stderr]     Checking regex v1.11.1
[INFO] [stderr]     Checking chrono v0.4.39
[INFO] [stderr]     Checking parking_lot v0.12.3
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[INFO] [stderr]     Checking raw-cpuid v11.2.0
[INFO] [stderr]    Compiling polars-schema v0.45.1
[INFO] [stderr]     Checking bytes v1.9.0
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[INFO] [stderr]    Compiling polars-arrow v0.45.1
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[INFO] [stderr]    Compiling polars-compute v0.45.1
[INFO] [stderr]     Checking ethnum v1.5.0
[INFO] [stderr]     Checking dyn-clone v1.0.17
[INFO] [stderr]     Checking strength_reduce v0.2.4
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[INFO] [stderr]    Compiling parse-zoneinfo v0.3.1
[INFO] [stderr]    Compiling zstd-sys v2.0.13+zstd.1.5.6
[INFO] [stderr]     Checking fast-float2 v0.2.3
[INFO] [stderr]     Checking itoap v1.0.1
[INFO] [stderr]     Checking atoi_simd v0.16.0
[INFO] [stderr]    Compiling chrono-tz-build v0.4.0
[INFO] [stderr]    Compiling synstructure v0.13.1
[INFO] [stderr]    Compiling lz4-sys v1.11.1+lz4-1.10.0
[INFO] [stderr]    Compiling polars-core v0.45.1
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[INFO] [stderr]     Checking unicode-width v0.2.0
[INFO] [stderr]     Checking strum v0.26.3
[INFO] [stderr]    Compiling polars-ops v0.45.1
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[INFO] [stderr]    Compiling glob v0.3.1
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[INFO] [stderr]    Compiling cmake v0.1.52
[INFO] [stderr]    Compiling clang-sys v1.8.1
[INFO] [stderr]    Compiling openssl-src v300.4.1+3.4.0
[INFO] [stderr]     Checking argminmax v0.6.2
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[INFO] [stderr]     Checking flate2 v1.0.35
[INFO] [stderr]    Compiling openssl-sys v0.9.104
[INFO] [stderr]    Compiling libz-sys v1.1.20
[INFO] [stderr]     Checking now v0.1.3
[INFO] [stderr]     Checking atoi v2.0.0
[INFO] [stderr]     Checking polars-parquet-format v0.1.0
[INFO] [stderr]    Compiling serde_derive v1.0.216
[INFO] [stderr]    Compiling zerocopy-derive v0.7.35
[INFO] [stderr]    Compiling thiserror-impl v2.0.7
[INFO] [stderr]     Checking zerocopy v0.7.35
[INFO] [stderr]    Compiling strum_macros v0.26.4
[INFO] [stderr]    Compiling bytemuck_derive v1.8.0
[INFO] [stderr]     Checking ppv-lite86 v0.2.20
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[INFO] [stderr]    Compiling multiversion-macros v0.7.4
[INFO] [stderr]     Checking rand_chacha v0.3.1
[INFO] [stderr]     Checking rand v0.8.5
[INFO] [stderr]     Checking bytemuck v1.20.0
[INFO] [stderr]    Compiling zerofrom-derive v0.1.5
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[INFO] [stderr]    Compiling zerovec-derive v0.10.3
[INFO] [stderr]    Compiling displaydoc v0.2.5
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[INFO] [stderr]    Compiling nom v7.1.3
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[INFO] [stderr]     Checking icu_locid v1.5.0
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[INFO] [stderr]    Compiling polars-plan v0.45.1
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[INFO] [stderr]     Checking icu_properties v1.5.1
[INFO] [stderr]    Compiling itertools v0.12.1
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[INFO] [stderr]     Checking recursive v0.1.1
[INFO] [stderr]    Compiling curl-sys v0.4.78+curl-8.11.0
[INFO] [stderr]     Checking polars-error v0.45.1
[INFO] [stderr]    Compiling lzma-sys v0.1.20
[INFO] [stderr]    Compiling bzip2-sys v0.1.11+1.0.8
[INFO] [stderr]    Compiling lazycell v1.3.0
[INFO] [stderr]    Compiling rustc-hash v1.1.0
[INFO] [stderr]    Compiling semver v0.1.20
[INFO] [stderr]    Compiling quick-error v1.2.3
[INFO] [stderr]    Compiling bitflags v2.6.0
[INFO] [stderr]     Checking icu_normalizer v1.5.0
[INFO] [stderr]    Compiling rustc_version v0.1.7
[INFO] [stderr]     Checking anstyle-parse v0.2.6
[INFO] [stderr]    Compiling fs-utils v1.1.4
[INFO] [stderr]     Checking anstyle v1.0.10
[INFO] [stderr]     Checking anstyle-query v1.1.2
[INFO] [stderr]     Checking colorchoice v1.0.3
[INFO] [stderr]     Checking anstream v0.6.18
[INFO] [stderr]     Checking idna_adapter v1.2.0
[INFO] [stderr]    Compiling newtype_derive v0.1.6
[INFO] [stderr]    Compiling thiserror-impl v1.0.69
[INFO] [stderr]     Checking zstd v0.13.2
[INFO] [stderr]    Compiling polars-lazy v0.45.1
[INFO] [stderr]     Checking idna v1.0.3
[INFO] [stderr]    Compiling derive-new v0.6.0
[INFO] [stderr]     Checking thiserror v1.0.69
[INFO] [stderr]    Compiling polars v0.45.1
[INFO] [stderr]     Checking clap_lex v0.7.4
[INFO] [stderr]     Checking env_filter v0.1.2
[INFO] [stderr]     Checking clap_builder v4.5.23
[INFO] [stderr]     Checking bio-types v1.0.4
[INFO] [stderr]     Checking url v2.5.4
[INFO] [stderr]    Compiling derive-new v0.7.0
[INFO] [stderr]    Compiling clap_derive v4.5.18
[INFO] [stderr]     Checking custom_derive v0.1.7
[INFO] [stderr]     Checking ieee754 v0.2.6
[INFO] [stderr]     Checking linear-map v1.2.0
[INFO] [stderr]     Checking tempfile v3.14.0
[INFO] [stderr]     Checking env_logger v0.11.5
[INFO] [stderr]     Checking md5 v0.7.0
[INFO] [stderr]    Compiling hts-sys v2.2.0
[INFO] [stderr]     Checking clap v4.5.23
[INFO] [stderr]     Checking polars-row v0.45.1
[INFO] [stderr]     Checking lz4 v1.28.0
[INFO] [stderr]     Checking polars-parquet v0.45.1
[INFO] [stderr]     Checking polars-time v0.45.1
[INFO] [stderr]     Checking polars-io v0.45.1
[INFO] [stderr]     Checking polars-expr v0.45.1
[INFO] [stderr]     Checking polars-mem-engine v0.45.1
[INFO] [stderr]     Checking rust-htslib v0.49.0
[INFO] [stderr]     Checking parquet2bcf v0.1.0 (/opt/rustwide/workdir)
[INFO] [stderr]     Finished `dev` profile [unoptimized + debuginfo] target(s) in 7m 27s
[INFO] running `Command { std: "docker" "inspect" "154c9dc1c51ae2d521de2218b9799c401be91cf003a6d0fb671640dbfc5f30e0", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "154c9dc1c51ae2d521de2218b9799c401be91cf003a6d0fb671640dbfc5f30e0", kill_on_drop: false }`
[INFO] [stdout] 154c9dc1c51ae2d521de2218b9799c401be91cf003a6d0fb671640dbfc5f30e0