[INFO] cloning repository https://github.com/berquist/rchem [INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/berquist/rchem" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fberquist%2Frchem", kill_on_drop: false }` [INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fberquist%2Frchem'... [INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }` [INFO] [stdout] e1221cf26ef9bb0f2ccd4dcf9a54f7c26250eceb [INFO] checking berquist/rchem/e1221cf26ef9bb0f2ccd4dcf9a54f7c26250eceb against master#8365fcb2b840c95eeb0bc377af8bd498fad22245 for pr-145605 [INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fberquist%2Frchem" "/workspace/builds/worker-6-tc1/source", kill_on_drop: false }` [INFO] [stderr] Cloning into '/workspace/builds/worker-6-tc1/source'... [INFO] [stderr] done. [INFO] started tweaking git repo https://github.com/berquist/rchem [INFO] finished tweaking git repo https://github.com/berquist/rchem [INFO] tweaked toml for git repo https://github.com/berquist/rchem written to /workspace/builds/worker-6-tc1/source/Cargo.toml [INFO] validating manifest of git repo https://github.com/berquist/rchem on toolchain 8365fcb2b840c95eeb0bc377af8bd498fad22245 [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+8365fcb2b840c95eeb0bc377af8bd498fad22245" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] crate git repo https://github.com/berquist/rchem already has a lockfile, it will not be regenerated [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+8365fcb2b840c95eeb0bc377af8bd498fad22245" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] Updating crates.io index [INFO] [stderr] Updating git repository `https://github.com/berquist/boys` [INFO] [stderr] Updating git repository `https://github.com/berquist/factorial` [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] [stderr] Downloading crates ... [INFO] [stderr] Downloaded katexit v0.1.4 [INFO] [stderr] Downloaded criterion v0.7.0 [INFO] [stderr] Downloaded GSL-sys v3.0.0 [INFO] [stderr] Downloaded criterion-plot v0.6.0 [INFO] [stderr] Downloaded cblas-sys v0.1.4 [INFO] [stderr] Downloaded lax v0.17.0 [INFO] [stderr] Downloaded ndarray-linalg v0.17.0 [INFO] [stderr] Downloaded chemfiles v0.10.41 [INFO] [stderr] Downloaded python3-sys v0.7.2 [INFO] [stderr] Downloaded GSL v7.0.0 [INFO] [stderr] Downloaded bindgen v0.72.0 [INFO] [stderr] Downloaded cpython v0.7.2 [INFO] [stderr] Downloaded chemfiles-sys v0.10.41 [INFO] [stderr] Downloaded lapack-sys v0.14.0 [INFO] [stderr] Downloaded netlib-src v0.8.0 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-6-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-6-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:7ad1b28ee6f5f7f699f6cf7015098d6ccdd96d6f2d78dd06228f5b4c9faf309c" "/opt/rustwide/cargo-home/bin/cargo" "+8365fcb2b840c95eeb0bc377af8bd498fad22245" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] d21cb362eb23e0f32adcb62a4c87e98cb658812629ab4224dfd09ac6df8b79ac [INFO] running `Command { std: "docker" "start" "-a" "d21cb362eb23e0f32adcb62a4c87e98cb658812629ab4224dfd09ac6df8b79ac", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "d21cb362eb23e0f32adcb62a4c87e98cb658812629ab4224dfd09ac6df8b79ac", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "d21cb362eb23e0f32adcb62a4c87e98cb658812629ab4224dfd09ac6df8b79ac", kill_on_drop: false }` [INFO] [stdout] d21cb362eb23e0f32adcb62a4c87e98cb658812629ab4224dfd09ac6df8b79ac [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-6-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-6-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:7ad1b28ee6f5f7f699f6cf7015098d6ccdd96d6f2d78dd06228f5b4c9faf309c" "/opt/rustwide/cargo-home/bin/cargo" "+8365fcb2b840c95eeb0bc377af8bd498fad22245" "check" "--frozen" "--all" "--all-targets" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] 9bc6c14ba83e3bf01a404cfbfb63337298dd3ac4f61425e7b61f2bb440e27259 [INFO] running `Command { std: "docker" "start" "-a" "9bc6c14ba83e3bf01a404cfbfb63337298dd3ac4f61425e7b61f2bb440e27259", kill_on_drop: false }` [INFO] [stderr] Compiling libc v0.2.171 [INFO] [stderr] Compiling proc-macro2 v1.0.94 [INFO] [stderr] Compiling unicode-ident v1.0.18 [INFO] [stderr] Compiling autocfg v1.4.0 [INFO] [stderr] Compiling shlex v1.3.0 [INFO] [stderr] Compiling memchr v2.7.4 [INFO] [stderr] Checking cfg-if v1.0.0 [INFO] [stderr] Compiling serde v1.0.219 [INFO] [stderr] Compiling zerocopy v0.8.24 [INFO] [stderr] Compiling regex-syntax v0.8.5 [INFO] [stderr] Compiling glob v0.3.2 [INFO] [stderr] Compiling prettyplease v0.2.31 [INFO] [stderr] Compiling pkg-config v0.3.32 [INFO] [stderr] Compiling crossbeam-utils v0.8.21 [INFO] [stderr] Compiling syn v1.0.109 [INFO] [stderr] Compiling paste v1.0.15 [INFO] [stderr] Compiling minimal-lexical v0.2.1 [INFO] [stderr] Compiling libloading v0.8.6 [INFO] [stderr] Compiling either v1.15.0 [INFO] [stderr] Compiling serde_json v1.0.143 [INFO] [stderr] Compiling cc v1.2.18 [INFO] [stderr] Compiling thiserror v2.0.12 [INFO] [stderr] Compiling bindgen v0.72.0 [INFO] [stderr] Compiling itertools v0.13.0 [INFO] [stderr] Compiling num-traits v0.2.19 [INFO] [stderr] Compiling matrixmultiply v0.3.9 [INFO] [stderr] Compiling GSL-sys v3.0.0 [INFO] [stderr] Compiling clang-sys v1.8.1 [INFO] [stderr] Compiling bitflags v2.9.0 [INFO] [stderr] Checking ryu v1.0.20 [INFO] [stderr] Compiling quote v1.0.40 [INFO] [stderr] Compiling log v0.4.27 [INFO] [stderr] Checking itoa v1.0.15 [INFO] [stderr] Compiling rustc-hash v2.1.1 [INFO] [stderr] Checking rawpointer v0.2.1 [INFO] [stderr] Compiling cpython v0.7.2 [INFO] [stderr] Compiling rayon-core v1.12.1 [INFO] [stderr] Compiling aho-corasick v1.1.3 [INFO] [stderr] Compiling nom v7.1.3 [INFO] [stderr] Checking crossbeam-epoch v0.9.18 [INFO] [stderr] Compiling syn v2.0.100 [INFO] [stderr] Checking getrandom v0.2.15 [INFO] [stderr] Checking cblas-sys v0.1.4 [INFO] [stderr] Checking lapack-sys v0.14.0 [INFO] [stderr] Checking crossbeam-deque v0.8.6 [INFO] [stderr] Checking rand_core v0.6.4 [INFO] [stderr] Checking half v2.5.0 [INFO] [stderr] Checking plotters-backend v0.3.7 [INFO] [stderr] Compiling cmake v0.1.54 [INFO] [stderr] Checking anstyle v1.0.10 [INFO] [stderr] Checking ciborium-io v0.2.2 [INFO] [stderr] Checking clap_lex v0.7.4 [INFO] [stderr] Checking ciborium-ll v0.2.2 [INFO] [stderr] Checking clap_builder v4.5.35 [INFO] [stderr] Checking approx v0.5.1 [INFO] [stderr] Checking num-integer v0.1.46 [INFO] [stderr] Checking factorial v0.2.1 (https://github.com/berquist/factorial?rev=0500498cdcc4f19d04111e3b3fc085c31a627300#0500498c) [INFO] [stderr] Checking plotters-svg v0.3.7 [INFO] [stderr] Checking cast v0.3.0 [INFO] [stderr] Checking ppv-lite86 v0.2.21 [INFO] [stderr] Checking same-file v1.0.6 [INFO] [stderr] Checking arrayvec v0.7.6 [INFO] [stderr] Checking walkdir v2.5.0 [INFO] [stderr] Checking plotters v0.3.7 [INFO] [stderr] Checking GSL v7.0.0 [INFO] [stderr] Checking rayon v1.10.0 [INFO] [stderr] Checking anes v0.1.6 [INFO] [stderr] Checking oorandom v11.1.5 [INFO] [stderr] Compiling netlib-src v0.8.0 [INFO] [stderr] Compiling chemfiles-sys v0.10.41 [INFO] [stderr] Checking rand_chacha v0.3.1 [INFO] [stderr] Checking rand v0.8.5 [INFO] [stderr] Checking regex-automata v0.4.9 [INFO] [stderr] Compiling cexpr v0.6.0 [INFO] [stderr] Checking boys v0.1.1 (https://github.com/berquist/boys#8cdcbab3) [INFO] [stderr] Checking criterion-plot v0.6.0 [INFO] [stderr] Checking clap v4.5.35 [INFO] [stderr] Checking regex v1.11.1 [INFO] [stderr] Compiling katexit v0.1.4 [INFO] [stderr] Compiling serde_derive v1.0.219 [INFO] [stderr] Compiling thiserror-impl v2.0.12 [INFO] [stderr] Compiling python3-sys v0.7.2 [INFO] [stderr] Compiling rchem v0.1.0 (/opt/rustwide/workdir) [INFO] [stderr] Checking num-complex v0.4.6 [INFO] [stderr] Checking ciborium v0.2.2 [INFO] [stderr] Checking tinytemplate v1.2.1 [INFO] [stderr] Checking cauchy v0.4.0 [INFO] [stderr] Checking ndarray v0.16.1 [INFO] [stderr] Checking criterion v0.7.0 [INFO] [stderr] Checking lax v0.17.0 [INFO] [stderr] Checking ndarray-linalg v0.17.0 [INFO] [stderr] error: failed to run custom build command for `chemfiles-sys v0.10.41` [INFO] [stderr] note: To improve backtraces for build dependencies, set the CARGO_PROFILE_DEV_BUILD_OVERRIDE_DEBUG=true environment variable to enable debug information generation. [INFO] [stderr] [INFO] [stderr] Caused by: [INFO] [stderr] process didn't exit successfully: `/opt/rustwide/target/debug/build/chemfiles-sys-f7f3d8f888026c0a/build-script-build` (exit status: 101) [INFO] [stderr] --- stdout [INFO] [stderr] CMAKE_TOOLCHAIN_FILE_x86_64-unknown-linux-gnu = None [INFO] [stderr] CMAKE_TOOLCHAIN_FILE_x86_64_unknown_linux_gnu = None [INFO] [stderr] HOST_CMAKE_TOOLCHAIN_FILE = None [INFO] [stderr] CMAKE_TOOLCHAIN_FILE = None [INFO] [stderr] CMAKE_GENERATOR_x86_64-unknown-linux-gnu = None [INFO] [stderr] CMAKE_GENERATOR_x86_64_unknown_linux_gnu = None [INFO] [stderr] HOST_CMAKE_GENERATOR = None [INFO] [stderr] CMAKE_GENERATOR = None [INFO] [stderr] CMAKE_PREFIX_PATH_x86_64-unknown-linux-gnu = None [INFO] [stderr] CMAKE_PREFIX_PATH_x86_64_unknown_linux_gnu = None [INFO] [stderr] HOST_CMAKE_PREFIX_PATH = None [INFO] [stderr] CMAKE_PREFIX_PATH = None [INFO] [stderr] CMAKE_x86_64-unknown-linux-gnu = None [INFO] [stderr] CMAKE_x86_64_unknown_linux_gnu = None [INFO] [stderr] HOST_CMAKE = None [INFO] [stderr] CMAKE = None [INFO] [stderr] running: cd "/opt/rustwide/target/debug/build/chemfiles-sys-27d1573b8ca2f0c8/out/build" && CMAKE_PREFIX_PATH="" LC_ALL="C" "cmake" "/opt/rustwide/cargo-home/registry/src/index.crates.io-1949cf8c6b5b557f/chemfiles-sys-0.10.41/." "-DCHEMFILES_VERSION=0.10.4" "-DCHFL_RUST_PREBUILT_TARGET=x86_64-linux-gnu" "-DCHFL_RUST_PREBUILT_SHA256=2ac97eba5b79f8051cd86184e00379271c72e85d2bbcbcd50626b0ec602a1978" "-DCMAKE_INSTALL_PREFIX=/opt/rustwide/target/debug/build/chemfiles-sys-27d1573b8ca2f0c8/out" "-DCMAKE_C_FLAGS= -ffunction-sections -fdata-sections -fPIC -m64" "-DCMAKE_C_COMPILER=/usr/bin/cc" "-DCMAKE_CXX_FLAGS= -ffunction-sections -fdata-sections -fPIC -m64" "-DCMAKE_CXX_COMPILER=/usr/bin/c++" "-DCMAKE_ASM_FLAGS= -ffunction-sections -fdata-sections -fPIC -m64" "-DCMAKE_ASM_COMPILER=/usr/bin/cc" "-DCMAKE_BUILD_TYPE=Debug" [INFO] [stderr] -- The CXX compiler identification is GNU 13.3.0 [INFO] [stderr] -- Detecting CXX compiler ABI info [INFO] [stderr] -- Detecting CXX compiler ABI info - done [INFO] [stderr] -- Check for working CXX compiler: /usr/bin/c++ - skipped [INFO] [stderr] -- Detecting CXX compile features [INFO] [stderr] -- Detecting CXX compile features - done [INFO] [stderr] -- trying to download https://github.com/chemfiles/chemfiles-prebuilt/releases/download/v0.10.4/chemfiles-static.v0.10.4.x86_64-linux-gnu.tar.gz [INFO] [stderr] -- failed to download prebuilt chemfiles, building from sources [INFO] [stderr] -- The C compiler identification is GNU 13.3.0 [INFO] [stderr] -- Detecting C compiler ABI info [INFO] [stderr] -- Detecting C compiler ABI info - done [INFO] [stderr] -- Check for working C compiler: /usr/bin/cc - skipped [INFO] [stderr] -- Detecting C compile features [INFO] [stderr] -- Detecting C compile features - done [INFO] [stderr] -- Unpacking zlib sources [INFO] [stderr] -- Unpacking lzma sources [INFO] [stderr] -- Unpacking bzip2 sources [INFO] [stderr] -- Unpacking fmt sources [INFO] [stderr] -- Unpacking toml11 sources [INFO] [stderr] -- Unpacking tng sources [INFO] [stderr] -- Unpacking molfiles sources [INFO] [stderr] -- Unpacking mmtf-cpp sources [INFO] [stderr] -- Unpacking pugixml sources [INFO] [stderr] -- Unpacking gemmi sources [INFO] [stderr] -- Configuring done (120.1s) [INFO] [stderr] -- Generating done (0.0s) [INFO] [stderr] -- Build files have been written to: /opt/rustwide/target/debug/build/chemfiles-sys-27d1573b8ca2f0c8/out/build [INFO] [stderr] running: cd "/opt/rustwide/target/debug/build/chemfiles-sys-27d1573b8ca2f0c8/out/build" && LC_ALL="C" MAKEFLAGS="-j --jobserver-fds=8,9 --jobserver-auth=8,9" "cmake" "--build" "/opt/rustwide/target/debug/build/chemfiles-sys-27d1573b8ca2f0c8/out/build" "--target" "install" "--config" "Debug" [INFO] [stderr] [ 3%] Building CXX object chemfiles/external/CMakeFiles/pugixml.dir/pugixml/src/pugixml.cpp.o [INFO] [stderr] [ 3%] Building CXX object /opt/rustwide/target/debug/build/chemfiles-sys-27d1573b8ca2f0c8/out/build/chemfiles/external/molfiles/CMakeFiles/molfiles.dir/src/gromacsplugin.cxx.o [INFO] [stderr] [ 3%] Building C object /opt/rustwide/target/debug/build/chemfiles-sys-27d1573b8ca2f0c8/out/build/chemfiles/external/bzip2/CMakeFiles/bzip2.dir/huffman.c.o [INFO] [stderr] [ 3%] 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[INFO] [stderr] --- stderr [INFO] [stderr] CMake Deprecation Warning at CMakeLists.txt:1 (cmake_minimum_required): [INFO] [stderr] Compatibility with CMake < 3.5 will be removed from a future version of [INFO] [stderr] CMake. [INFO] [stderr] [INFO] [stderr] Update the VERSION argument value or use a ... suffix to tell [INFO] [stderr] CMake that the project does not need compatibility with older versions. [INFO] [stderr] [INFO] [stderr] [INFO] [stderr] CMake Deprecation Warning at chemfiles/CMakeLists.txt:1 (cmake_minimum_required): [INFO] [stderr] Compatibility with CMake < 3.5 will be removed from a future version of [INFO] [stderr] CMake. [INFO] [stderr] [INFO] [stderr] Update the VERSION argument value or use a ... suffix to tell [INFO] [stderr] CMake that the project does not need compatibility with older versions. [INFO] [stderr] [INFO] [stderr] [INFO] [stderr] CMake Warning (dev) at chemfiles/CMakeLists.txt:35 (option): [INFO] [stderr] Policy CMP0077 is not set: option() honors normal variables. Run "cmake [INFO] [stderr] --help-policy CMP0077" for policy details. Use the cmake_policy command to [INFO] [stderr] set the policy and suppress this warning. [INFO] [stderr] [INFO] [stderr] For compatibility with older versions of CMake, option is clearing the [INFO] [stderr] normal variable 'BUILD_SHARED_LIBS'. [INFO] [stderr] This warning is for project developers. Use -Wno-dev to suppress it. [INFO] [stderr] [INFO] [stderr] CMake Deprecation Warning at /opt/rustwide/target/debug/build/chemfiles-sys-27d1573b8ca2f0c8/out/build/chemfiles/external/zlib/CMakeLists.txt:1 (cmake_minimum_required): [INFO] [stderr] Compatibility with CMake < 3.5 will be removed from a future version of [INFO] [stderr] CMake. [INFO] [stderr] [INFO] [stderr] Update the VERSION argument value or use a ... suffix to tell [INFO] [stderr] CMake that the project does not need compatibility with older versions. [INFO] [stderr] [INFO] [stderr] [INFO] [stderr] CMake Deprecation Warning at /opt/rustwide/target/debug/build/chemfiles-sys-27d1573b8ca2f0c8/out/build/chemfiles/external/lzma/CMakeLists.txt:1 (cmake_minimum_required): [INFO] [stderr] Compatibility with CMake < 3.5 will be removed from a future version of [INFO] [stderr] CMake. [INFO] [stderr] [INFO] [stderr] Update the VERSION argument value or use a ... suffix to tell [INFO] [stderr] CMake that the project does not need compatibility with older versions. [INFO] [stderr] [INFO] [stderr] [INFO] [stderr] CMake Deprecation Warning at /opt/rustwide/target/debug/build/chemfiles-sys-27d1573b8ca2f0c8/out/build/chemfiles/external/bzip2/CMakeLists.txt:1 (cmake_minimum_required): [INFO] [stderr] Compatibility with CMake < 3.5 will be removed from a future version of [INFO] [stderr] CMake. [INFO] [stderr] [INFO] [stderr] Update the VERSION argument value or use a ... suffix to tell [INFO] [stderr] CMake that the project does not need compatibility with older versions. [INFO] [stderr] [INFO] [stderr] [INFO] [stderr] CMake Deprecation Warning at /opt/rustwide/target/debug/build/chemfiles-sys-27d1573b8ca2f0c8/out/build/chemfiles/external/fmt/CMakeLists.txt:1 (cmake_minimum_required): [INFO] [stderr] Compatibility with CMake < 3.5 will be removed from a future version of [INFO] [stderr] CMake. [INFO] [stderr] [INFO] [stderr] Update the VERSION argument value or use a ... suffix to tell [INFO] [stderr] CMake that the project does not need compatibility with older versions. [INFO] [stderr] [INFO] [stderr] [INFO] [stderr] CMake Deprecation Warning at /opt/rustwide/target/debug/build/chemfiles-sys-27d1573b8ca2f0c8/out/build/chemfiles/external/tng/CMakeLists.txt:1 (cmake_minimum_required): [INFO] [stderr] Compatibility with CMake < 3.5 will be removed from a future version of [INFO] [stderr] CMake. [INFO] [stderr] [INFO] [stderr] Update the VERSION argument value or use a ... suffix to tell [INFO] [stderr] CMake that the project does not need compatibility with older versions. [INFO] [stderr] [INFO] [stderr] [INFO] [stderr] CMake Deprecation Warning at /opt/rustwide/target/debug/build/chemfiles-sys-27d1573b8ca2f0c8/out/build/chemfiles/external/molfiles/CMakeLists.txt:1 (cmake_minimum_required): [INFO] [stderr] Compatibility with CMake < 3.5 will be removed from a future version of [INFO] [stderr] CMake. [INFO] [stderr] [INFO] [stderr] Update the VERSION argument value or use a ... suffix to tell [INFO] [stderr] CMake that the project does not need compatibility with older versions. [INFO] [stderr] [INFO] [stderr] [INFO] [stderr] CMake Warning: [INFO] [stderr] Manually-specified variables were not used by the project: [INFO] [stderr] [INFO] [stderr] CMAKE_ASM_COMPILER [INFO] [stderr] CMAKE_ASM_FLAGS [INFO] [stderr] [INFO] [stderr] [INFO] [stderr] c++: fatal error: Killed signal terminated program cc1plus [INFO] [stderr] compilation terminated. [INFO] [stderr] gmake[2]: *** [chemfiles/CMakeFiles/chemfiles_objects.dir/build.make:90: chemfiles/CMakeFiles/chemfiles_objects.dir/src/Configuration.cpp.o] Error 1 [INFO] [stderr] gmake[2]: *** Waiting for unfinished jobs.... [INFO] [stderr] c++: fatal error: Killed signal terminated program cc1plus [INFO] [stderr] compilation terminated. [INFO] [stderr] gmake[2]: *** [chemfiles/CMakeFiles/chemfiles_objects.dir/build.make:146: chemfiles/CMakeFiles/chemfiles_objects.dir/src/FormatFactory.cpp.o] Error 1 [INFO] [stderr] gmake[1]: *** [CMakeFiles/Makefile2:214: chemfiles/CMakeFiles/chemfiles_objects.dir/all] Error 2 [INFO] [stderr] gmake: *** [Makefile:136: all] Error 2 [INFO] [stderr] [INFO] [stderr] thread 'main' (1236) panicked at /opt/rustwide/cargo-home/registry/src/index.crates.io-1949cf8c6b5b557f/cmake-0.1.54/src/lib.rs:1119:5: [INFO] [stderr] [INFO] [stderr] command did not execute successfully, got: exit status: 2 [INFO] [stderr] [INFO] [stderr] build script failed, must exit now [INFO] [stderr] stack backtrace: [INFO] [stderr] 0: 0x5b3b61fc4ae2 - std::backtrace_rs::backtrace::libunwind::trace::h906a332dc52fe9ec [INFO] [stderr] at /rustc/8365fcb2b840c95eeb0bc377af8bd498fad22245/library/std/src/../../backtrace/src/backtrace/libunwind.rs:117:9 [INFO] [stderr] 1: 0x5b3b61fc4ae2 - std::backtrace_rs::backtrace::trace_unsynchronized::h0a63f81f94de8fb8 [INFO] [stderr] at /rustc/8365fcb2b840c95eeb0bc377af8bd498fad22245/library/std/src/../../backtrace/src/backtrace/mod.rs:66:14 [INFO] [stderr] 2: 0x5b3b61fc4ae2 - std::sys::backtrace::_print_fmt::hd61e947fc70a2ee7 [INFO] [stderr] at /rustc/8365fcb2b840c95eeb0bc377af8bd498fad22245/library/std/src/sys/backtrace.rs:66:9 [INFO] [stderr] 3: 0x5b3b61fc4ae2 - ::fmt::ha5e5cf64959547b2 [INFO] [stderr] at /rustc/8365fcb2b840c95eeb0bc377af8bd498fad22245/library/std/src/sys/backtrace.rs:39:26 [INFO] [stderr] 4: 0x5b3b61fe5e7f - core::fmt::rt::Argument::fmt::hcf04f947fb0fac70 [INFO] [stderr] at /rustc/8365fcb2b840c95eeb0bc377af8bd498fad22245/library/core/src/fmt/rt.rs:173:76 [INFO] [stderr] 5: 0x5b3b61fe5e7f - core::fmt::write::hf7bfcd12333bfad3 [INFO] [stderr] at /rustc/8365fcb2b840c95eeb0bc377af8bd498fad22245/library/core/src/fmt/mod.rs:1468:25 [INFO] [stderr] 6: 0x5b3b61fb5733 - std::io::default_write_fmt::h205e55fff24e7e91 [INFO] [stderr] at /rustc/8365fcb2b840c95eeb0bc377af8bd498fad22245/library/std/src/io/mod.rs:639:11 [INFO] [stderr] 7: 0x5b3b61fb5733 - std::io::Write::write_fmt::hf3a72f79acb7f5ab [INFO] [stderr] at /rustc/8365fcb2b840c95eeb0bc377af8bd498fad22245/library/std/src/io/mod.rs:1954:13 [INFO] [stderr] 8: 0x5b3b61fc4c12 - std::sys::backtrace::BacktraceLock::print::h7a96bb836bb426bb [INFO] [stderr] at /rustc/8365fcb2b840c95eeb0bc377af8bd498fad22245/library/std/src/sys/backtrace.rs:42:9 [INFO] [stderr] 9: 0x5b3b61fb271c - std::panicking::default_hook::{{closure}}::h89e60b86018db54b [INFO] [stderr] at /rustc/8365fcb2b840c95eeb0bc377af8bd498fad22245/library/std/src/panicking.rs:301:27 [INFO] [stderr] 10: 0x5b3b61fb255f - std::panicking::default_hook::h1fc11391dc44074e [INFO] [stderr] at /rustc/8365fcb2b840c95eeb0bc377af8bd498fad22245/library/std/src/panicking.rs:328:9 [INFO] [stderr] 11: 0x5b3b61fb2e5a - std::panicking::panic_with_hook::h6aeac006f0589f4a [INFO] [stderr] at /rustc/8365fcb2b840c95eeb0bc377af8bd498fad22245/library/std/src/panicking.rs:834:13 [INFO] [stderr] 12: 0x5b3b61fc4cca - std::panicking::panic_handler::{{closure}}::h4f5533bf12a86f45 [INFO] [stderr] at /rustc/8365fcb2b840c95eeb0bc377af8bd498fad22245/library/std/src/panicking.rs:707:13 [INFO] [stderr] 13: 0x5b3b61fc4c29 - std::sys::backtrace::__rust_end_short_backtrace::he15bcc1b1f597627 [INFO] [stderr] at /rustc/8365fcb2b840c95eeb0bc377af8bd498fad22245/library/std/src/sys/backtrace.rs:174:18 [INFO] [stderr] 14: 0x5b3b61fb2c6d - __rustc[e05654f77a4799c6]::rust_begin_unwind [INFO] [stderr] at /rustc/8365fcb2b840c95eeb0bc377af8bd498fad22245/library/std/src/panicking.rs:698:5 [INFO] [stderr] 15: 0x5b3b61fe9f20 - core::panicking::panic_fmt::hc73081da33389bc3 [INFO] [stderr] at /rustc/8365fcb2b840c95eeb0bc377af8bd498fad22245/library/core/src/panicking.rs:75:14 [INFO] [stderr] 16: 0x5b3b61f3ab8b - cmake::fail::h498221004c27c0f6 [INFO] [stderr] 17: 0x5b3b61f347c2 - cmake::run::h1c40f321114e8535 [INFO] [stderr] 18: 0x5b3b61f39dbb - cmake::Config::build::h10c1e682c556bce9 [INFO] [stderr] 19: 0x5b3b61f288b8 - build_script_build::build_chemfiles::he5041714bbc0825a [INFO] [stderr] 20: 0x5b3b61f27d63 - build_script_build::main::hcc663685f38cbeba [INFO] [stderr] 21: 0x5b3b61f27683 - core::ops::function::FnOnce::call_once::hced07c546fa7a044 [INFO] [stderr] 22: 0x5b3b61f26bc6 - std::sys::backtrace::__rust_begin_short_backtrace::h14b2ee83a41ee274 [INFO] [stderr] 23: 0x5b3b61f26a39 - std::rt::lang_start::{{closure}}::h951504e845b37f65 [INFO] [stderr] 24: 0x5b3b61fc5570 - core::ops::function::impls:: for &F>::call_once::hd28111ab97ee8167 [INFO] [stderr] at /rustc/8365fcb2b840c95eeb0bc377af8bd498fad22245/library/core/src/ops/function.rs:290:21 [INFO] [stderr] 25: 0x5b3b61fc5570 - std::panicking::catch_unwind::do_call::hbe64f6b69f0747b8 [INFO] [stderr] at /rustc/8365fcb2b840c95eeb0bc377af8bd498fad22245/library/std/src/panicking.rs:590:40 [INFO] [stderr] 26: 0x5b3b61fc5570 - std::panicking::catch_unwind::h237fa148d9889102 [INFO] [stderr] at /rustc/8365fcb2b840c95eeb0bc377af8bd498fad22245/library/std/src/panicking.rs:553:19 [INFO] [stderr] 27: 0x5b3b61fc5570 - std::panic::catch_unwind::h069e88c12ad96fbd [INFO] [stderr] at /rustc/8365fcb2b840c95eeb0bc377af8bd498fad22245/library/std/src/panic.rs:359:14 [INFO] [stderr] 28: 0x5b3b61fc5570 - std::rt::lang_start_internal::{{closure}}::he4a94fbdb728f9e0 [INFO] [stderr] at /rustc/8365fcb2b840c95eeb0bc377af8bd498fad22245/library/std/src/rt.rs:175:24 [INFO] [stderr] 29: 0x5b3b61fc5570 - std::panicking::catch_unwind::do_call::hbecde6b8791cefca [INFO] [stderr] at /rustc/8365fcb2b840c95eeb0bc377af8bd498fad22245/library/std/src/panicking.rs:590:40 [INFO] [stderr] 30: 0x5b3b61fc5570 - std::panicking::catch_unwind::h26ffc07ef94fc4bb [INFO] [stderr] at /rustc/8365fcb2b840c95eeb0bc377af8bd498fad22245/library/std/src/panicking.rs:553:19 [INFO] [stderr] 31: 0x5b3b61fc5570 - std::panic::catch_unwind::hdf217aa873dfc486 [INFO] [stderr] at /rustc/8365fcb2b840c95eeb0bc377af8bd498fad22245/library/std/src/panic.rs:359:14 [INFO] [stderr] 32: 0x5b3b61fc5570 - std::rt::lang_start_internal::h34b3ae202886d493 [INFO] [stderr] at /rustc/8365fcb2b840c95eeb0bc377af8bd498fad22245/library/std/src/rt.rs:171:5 [INFO] [stderr] 33: 0x5b3b61f26a71 - std::rt::lang_start::h120701385fe645db [INFO] [stderr] 34: 0x5b3b61f29875 - main [INFO] [stderr] 35: 0x7d2650df61ca - [INFO] [stderr] 36: 0x7d2650df628b - __libc_start_main [INFO] [stderr] 37: 0x5b3b61f261d5 - _start [INFO] [stderr] 38: 0x0 - [INFO] running `Command { std: "docker" "inspect" "9bc6c14ba83e3bf01a404cfbfb63337298dd3ac4f61425e7b61f2bb440e27259", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "9bc6c14ba83e3bf01a404cfbfb63337298dd3ac4f61425e7b61f2bb440e27259", kill_on_drop: false }` [INFO] [stdout] 9bc6c14ba83e3bf01a404cfbfb63337298dd3ac4f61425e7b61f2bb440e27259