[INFO] cloning repository https://github.com/mbhall88/rasusa [INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/mbhall88/rasusa" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fmbhall88%2Frasusa", kill_on_drop: false }` [INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fmbhall88%2Frasusa'... [INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }` [INFO] [stdout] 42d1ad030db5162fdac297bdfd0cea5cc41c2200 [INFO] checking mbhall88/rasusa against try#099af82bc034c1e4895c90e5407fafdd61976cdb for pr-145457 [INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fmbhall88%2Frasusa" "/workspace/builds/worker-7-tc2/source", kill_on_drop: false }` [INFO] [stderr] Cloning into '/workspace/builds/worker-7-tc2/source'... [INFO] [stderr] done. [INFO] started tweaking git repo https://github.com/mbhall88/rasusa [INFO] finished tweaking git repo https://github.com/mbhall88/rasusa [INFO] tweaked toml for git repo https://github.com/mbhall88/rasusa written to /workspace/builds/worker-7-tc2/source/Cargo.toml [INFO] validating manifest of git repo https://github.com/mbhall88/rasusa on toolchain 099af82bc034c1e4895c90e5407fafdd61976cdb [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+099af82bc034c1e4895c90e5407fafdd61976cdb" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] crate git repo https://github.com/mbhall88/rasusa already has a lockfile, it will not be regenerated [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+099af82bc034c1e4895c90e5407fafdd61976cdb" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] [stderr] Updating crates.io index [INFO] [stderr] Blocking waiting for file lock on package cache [ERROR] error running command: no output for 300 seconds [INFO] checking mbhall88/rasusa against try#099af82bc034c1e4895c90e5407fafdd61976cdb for pr-145457 [INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fmbhall88%2Frasusa" "/workspace/builds/worker-7-tc2/source", kill_on_drop: false }` [INFO] [stderr] Cloning into '/workspace/builds/worker-7-tc2/source'... [INFO] [stderr] done. [INFO] started tweaking git repo https://github.com/mbhall88/rasusa [INFO] finished tweaking git repo https://github.com/mbhall88/rasusa [INFO] tweaked toml for git repo https://github.com/mbhall88/rasusa written to /workspace/builds/worker-7-tc2/source/Cargo.toml [INFO] validating manifest of git repo https://github.com/mbhall88/rasusa on toolchain 099af82bc034c1e4895c90e5407fafdd61976cdb [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+099af82bc034c1e4895c90e5407fafdd61976cdb" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] crate git repo https://github.com/mbhall88/rasusa already has a lockfile, it will not be regenerated [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+099af82bc034c1e4895c90e5407fafdd61976cdb" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] [stderr] Downloading crates ... [INFO] [stderr] Downloaded bio-types v1.0.1 [INFO] [stderr] Downloaded fs-utils v1.1.4 [INFO] [stderr] Downloaded newtype_derive v0.1.6 [INFO] [stderr] Downloaded bgzip v0.2.2 [INFO] [stderr] Downloaded niffler v2.5.0 [INFO] [stderr] Downloaded needletail v0.5.1 [INFO] [stderr] Downloaded rust-htslib v0.46.0 [INFO] [stderr] Downloaded hts-sys v2.1.1 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-7-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-7-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:7ad1b28ee6f5f7f699f6cf7015098d6ccdd96d6f2d78dd06228f5b4c9faf309c" "/opt/rustwide/cargo-home/bin/cargo" "+099af82bc034c1e4895c90e5407fafdd61976cdb" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] 9869679d9617e96751eeb96650919b9c23950430b264d9553a1a2ee9c89cbf4b [INFO] running `Command { std: "docker" "start" "-a" "9869679d9617e96751eeb96650919b9c23950430b264d9553a1a2ee9c89cbf4b", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "9869679d9617e96751eeb96650919b9c23950430b264d9553a1a2ee9c89cbf4b", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "9869679d9617e96751eeb96650919b9c23950430b264d9553a1a2ee9c89cbf4b", kill_on_drop: false }` [INFO] [stdout] 9869679d9617e96751eeb96650919b9c23950430b264d9553a1a2ee9c89cbf4b [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-7-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-7-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:7ad1b28ee6f5f7f699f6cf7015098d6ccdd96d6f2d78dd06228f5b4c9faf309c" "/opt/rustwide/cargo-home/bin/cargo" "+099af82bc034c1e4895c90e5407fafdd61976cdb" "check" "--frozen" "--all" "--all-targets" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] 048522a0e317cc363875c9a10fa87ccb59e8587ff04cc089b75587be349a423f [INFO] running `Command { std: "docker" "start" "-a" "048522a0e317cc363875c9a10fa87ccb59e8587ff04cc089b75587be349a423f", kill_on_drop: false }` [INFO] [stderr] Compiling libc v0.2.153 [INFO] [stderr] Compiling pkg-config v0.3.28 [INFO] [stderr] Compiling proc-macro2 v1.0.76 [INFO] [stderr] Checking anstyle v1.0.6 [INFO] [stderr] Compiling vcpkg v0.2.15 [INFO] [stderr] Checking regex-automata v0.4.6 [INFO] [stderr] Checking tinyvec_macros v0.1.1 [INFO] [stderr] Compiling semver v0.1.20 [INFO] [stderr] Checking utf8parse v0.2.1 [INFO] [stderr] Checking adler v1.0.2 [INFO] [stderr] Compiling syn v1.0.109 [INFO] [stderr] Compiling rustversion v1.0.15 [INFO] [stderr] Compiling quick-error v1.2.3 [INFO] [stderr] Compiling num-traits v0.2.17 [INFO] [stderr] Compiling fs-utils v1.1.4 [INFO] [stderr] Compiling rustc_version v0.1.7 [INFO] [stderr] Checking miniz_oxide v0.7.1 [INFO] [stderr] Checking anstyle-parse v0.2.3 [INFO] [stderr] Checking tinyvec v1.6.0 [INFO] [stderr] Checking crc32fast v1.3.2 [INFO] [stderr] Compiling zstd-safe v6.0.6 [INFO] [stderr] Compiling quote v1.0.35 [INFO] [stderr] Checking colorchoice v1.0.0 [INFO] [stderr] Checking anstyle-query v1.0.2 [INFO] [stderr] Compiling newtype_derive v0.1.6 [INFO] [stderr] Checking flate2 v1.0.28 [INFO] [stderr] Checking anstream v0.6.13 [INFO] [stderr] Compiling syn v2.0.48 [INFO] [stderr] Checking unicode-normalization v0.1.23 [INFO] [stderr] Checking unicode-bidi v0.3.15 [INFO] [stderr] Compiling jobserver v0.1.27 [INFO] [stderr] Checking log v0.4.21 [INFO] [stderr] Checking getrandom v0.2.11 [INFO] [stderr] Checking idna v0.5.0 [INFO] [stderr] Compiling cc v1.0.83 [INFO] [stderr] Checking rand_core v0.6.4 [INFO] [stderr] Checking clap_lex v0.7.0 [INFO] [stderr] Compiling rustix v0.38.32 [INFO] [stderr] Checking safemem v0.3.3 [INFO] [stderr] Checking predicates-core v1.0.6 [INFO] [stderr] Compiling heck v0.5.0 [INFO] [stderr] Checking strsim v0.11.1 [INFO] [stderr] Compiling doc-comment v0.3.3 [INFO] [stderr] Checking clap_builder v4.5.2 [INFO] [stderr] Checking regex v1.10.4 [INFO] [stderr] Checking rand_chacha v0.3.1 [INFO] [stderr] Compiling cmake v0.1.50 [INFO] [stderr] Checking float-cmp v0.9.0 [INFO] [stderr] Checking buffer-redux v1.0.0 [INFO] [stderr] Checking url v2.5.0 [INFO] [stderr] Checking env_filter v0.1.0 [INFO] [stderr] Checking bytecount v0.6.7 [INFO] [stderr] Checking bitflags v2.4.1 [INFO] [stderr] Checking normalize-line-endings v0.3.0 [INFO] [stderr] Checking linux-raw-sys v0.4.12 [INFO] [stderr] Checking termtree v0.4.1 [INFO] [stderr] Checking difflib v0.4.0 [INFO] [stderr] Checking custom_derive v0.1.7 [INFO] [stderr] Checking linear-map v1.2.0 [INFO] [stderr] Checking humantime v2.1.0 [INFO] [stderr] Checking byteorder v1.5.0 [INFO] [stderr] Compiling assert_cmd v2.0.14 [INFO] [stderr] Checking ieee754 v0.2.6 [INFO] [stderr] Compiling bzip2-sys v0.1.11+1.0.8 [INFO] [stderr] Compiling lzma-sys v0.1.20 [INFO] [stderr] Compiling zstd-sys v2.0.9+zstd.1.5.5 [INFO] [stderr] Compiling libz-sys v1.1.16 [INFO] [stderr] Compiling hts-sys v2.1.1 [INFO] [stderr] Checking env_logger v0.11.3 [INFO] [stderr] Checking predicates v3.1.0 [INFO] [stderr] Checking predicates-tree v1.0.9 [INFO] [stderr] Checking rand v0.8.5 [INFO] [stderr] Compiling derive-new v0.5.9 [INFO] [stderr] Checking bstr v1.9.0 [INFO] [stderr] Checking rand_pcg v0.3.1 [INFO] [stderr] Checking wait-timeout v0.2.0 [INFO] [stderr] Checking fastrand v2.0.1 [INFO] [stderr] Checking bzip2 v0.4.4 [INFO] [stderr] Checking tempfile v3.10.1 [INFO] [stderr] Compiling thiserror-impl v1.0.56 [INFO] [stderr] Compiling strum_macros v0.25.3 [INFO] [stderr] Compiling clap_derive v4.5.4 [INFO] [stderr] Checking thiserror v1.0.56 [INFO] [stderr] Checking bgzip v0.2.2 [INFO] [stderr] Checking bio-types v1.0.1 [INFO] [stderr] Checking clap v4.5.4 [INFO] [stderr] Checking xz2 v0.1.7 [INFO] [stderr] Checking needletail v0.5.1 [INFO] [stderr] Checking zstd v0.12.4 [INFO] [stderr] Checking niffler v2.5.0 [INFO] [stderr] Checking rust-htslib v0.46.0 [INFO] [stderr] Checking rasusa v2.1.1 (/opt/rustwide/workdir) [INFO] [stdout] warning: hiding a lifetime that's elided elsewhere is confusing [INFO] [stdout] --> src/alignment.rs:247:22 [INFO] [stdout] | [INFO] [stdout] 247 | fn program_entry(&self, header: &Header) -> HeaderRecord { [INFO] [stdout] | ^^^^^ ------------ the same lifetime is hidden here [INFO] [stdout] | | [INFO] [stdout] | the lifetime is elided here [INFO] [stdout] | [INFO] [stdout] = help: the same lifetime is referred to in inconsistent ways, making the signature confusing [INFO] [stdout] = note: `#[warn(mismatched_lifetime_syntaxes)]` on by default [INFO] [stdout] help: use `'_` for type paths [INFO] [stdout] | [INFO] [stdout] 247 | fn program_entry(&self, header: &Header) -> HeaderRecord<'_> { [INFO] [stdout] | ++++ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: hiding a lifetime that's elided elsewhere is confusing [INFO] [stdout] --> src/alignment.rs:247:22 [INFO] [stdout] | [INFO] [stdout] 247 | fn program_entry(&self, header: &Header) -> HeaderRecord { [INFO] [stdout] | ^^^^^ ------------ the same lifetime is hidden here [INFO] [stdout] | | [INFO] [stdout] | the lifetime is elided here [INFO] [stdout] | [INFO] [stdout] = help: the same lifetime is referred to in inconsistent ways, making the signature confusing [INFO] [stdout] = note: `#[warn(mismatched_lifetime_syntaxes)]` on by default [INFO] [stdout] help: use `'_` for type paths [INFO] [stdout] | [INFO] [stdout] 247 | fn program_entry(&self, header: &Header) -> HeaderRecord<'_> { [INFO] [stdout] | ++++ [INFO] [stdout] [INFO] [stdout] [INFO] [stderr] Finished `dev` profile [unoptimized + debuginfo] target(s) in 23.76s [INFO] running `Command { std: "docker" "inspect" "048522a0e317cc363875c9a10fa87ccb59e8587ff04cc089b75587be349a423f", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "048522a0e317cc363875c9a10fa87ccb59e8587ff04cc089b75587be349a423f", kill_on_drop: false }` [INFO] [stdout] 048522a0e317cc363875c9a10fa87ccb59e8587ff04cc089b75587be349a423f