[INFO] fetching crate d4utils 0.2.18... [INFO] checking d4utils-0.2.18 against try#a4980311fb7bb9e7893708e6bd3fbbfb2819fd3d for pr-145342-1 [INFO] extracting crate d4utils 0.2.18 into /workspace/builds/worker-0-tc2/source [INFO] started tweaking crates.io crate d4utils 0.2.18 [INFO] finished tweaking crates.io crate d4utils 0.2.18 [INFO] tweaked toml for crates.io crate d4utils 0.2.18 written to /workspace/builds/worker-0-tc2/source/Cargo.toml [INFO] validating manifest of crates.io crate d4utils 0.2.18 on toolchain a4980311fb7bb9e7893708e6bd3fbbfb2819fd3d [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+a4980311fb7bb9e7893708e6bd3fbbfb2819fd3d" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] crate crates.io crate d4utils 0.2.18 already has a lockfile, it will not be regenerated [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+a4980311fb7bb9e7893708e6bd3fbbfb2819fd3d" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] warning: `default_features` is deprecated in favor of `default-features` and will not work in the 2024 edition [INFO] [stderr] (in the `plotters` dependency) [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-0-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-0-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:7ad1b28ee6f5f7f699f6cf7015098d6ccdd96d6f2d78dd06228f5b4c9faf309c" "/opt/rustwide/cargo-home/bin/cargo" "+a4980311fb7bb9e7893708e6bd3fbbfb2819fd3d" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] 86e352ace1049a9e6faf5afeb549b4972e6a1dcd253bfa2349de636298283376 [INFO] running `Command { std: "docker" "start" "-a" "86e352ace1049a9e6faf5afeb549b4972e6a1dcd253bfa2349de636298283376", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "86e352ace1049a9e6faf5afeb549b4972e6a1dcd253bfa2349de636298283376", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "86e352ace1049a9e6faf5afeb549b4972e6a1dcd253bfa2349de636298283376", kill_on_drop: false }` [INFO] [stdout] 86e352ace1049a9e6faf5afeb549b4972e6a1dcd253bfa2349de636298283376 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-0-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-0-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:7ad1b28ee6f5f7f699f6cf7015098d6ccdd96d6f2d78dd06228f5b4c9faf309c" "/opt/rustwide/cargo-home/bin/cargo" "+a4980311fb7bb9e7893708e6bd3fbbfb2819fd3d" "check" "--frozen" "--all" "--all-targets" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] d7be58295594c890151f8a4b2cf3bd7f9d98cd2dce2f0a4a8d8720e7ce57bcbf [INFO] running `Command { std: "docker" "start" "-a" "d7be58295594c890151f8a4b2cf3bd7f9d98cd2dce2f0a4a8d8720e7ce57bcbf", kill_on_drop: false }` [INFO] [stderr] warning: `default_features` is deprecated in favor of `default-features` and will not work in the 2024 edition [INFO] [stderr] (in the `plotters` dependency) [INFO] [stderr] Compiling libc v0.2.94 [INFO] [stderr] Compiling autocfg v1.0.1 [INFO] [stderr] Compiling memchr v2.4.0 [INFO] [stderr] Checking cfg-if v1.0.0 [INFO] [stderr] Compiling proc-macro2 v1.0.26 [INFO] [stderr] Compiling log v0.4.14 [INFO] [stderr] Compiling bitflags v1.2.1 [INFO] [stderr] Compiling glob v0.3.0 [INFO] [stderr] Compiling unicode-xid v0.2.2 [INFO] [stderr] Compiling version_check v0.9.3 [INFO] [stderr] Compiling unicode-width v0.1.8 [INFO] [stderr] Compiling regex-syntax v0.6.25 [INFO] [stderr] Compiling quick-error v1.2.3 [INFO] [stderr] Compiling termcolor v1.1.2 [INFO] [stderr] Compiling yaml-rust v0.3.5 [INFO] [stderr] Compiling libloading v0.7.0 [INFO] [stderr] Compiling bindgen v0.55.1 [INFO] [stderr] Compiling humantime v1.3.0 [INFO] [stderr] Compiling textwrap v0.11.0 [INFO] [stderr] Compiling ansi_term v0.11.0 [INFO] [stderr] Compiling strsim v0.8.0 [INFO] [stderr] Compiling vec_map v0.8.2 [INFO] [stderr] Compiling crossbeam-utils v0.8.4 [INFO] [stderr] Compiling peeking_take_while v0.1.2 [INFO] [stderr] Compiling shlex v0.1.1 [INFO] [stderr] Compiling lazy_static v1.4.0 [INFO] [stderr] Compiling lazycell v1.3.0 [INFO] [stderr] Compiling cfg-if v0.1.10 [INFO] [stderr] Compiling rustc-hash v1.1.0 [INFO] [stderr] Compiling memoffset v0.6.3 [INFO] [stderr] Compiling clang-sys v1.2.0 [INFO] [stderr] Compiling getrandom v0.1.16 [INFO] [stderr] Compiling miniz_oxide v0.4.4 [INFO] [stderr] Compiling rayon-core v1.9.0 [INFO] [stderr] Checking scopeguard v1.1.0 [INFO] [stderr] Compiling serde v1.0.125 [INFO] [stderr] Compiling crc32fast v1.2.1 [INFO] [stderr] Compiling syn v1.0.72 [INFO] [stderr] Compiling pkg-config v0.3.19 [INFO] [stderr] Compiling nom v5.1.2 [INFO] [stderr] Compiling ryu v1.0.5 [INFO] [stderr] Checking adler v1.0.2 [INFO] [stderr] Checking num_cpus v1.13.0 [INFO] [stderr] Compiling quote v1.0.9 [INFO] [stderr] Compiling atty v0.2.14 [INFO] [stderr] Compiling which v3.1.1 [INFO] [stderr] Checking rand_core v0.5.1 [INFO] [stderr] Compiling clap v2.33.3 [INFO] [stderr] Compiling rayon v1.5.0 [INFO] [stderr] Compiling aho-corasick v0.7.18 [INFO] [stderr] Compiling num-traits v0.2.14 [INFO] [stderr] Compiling serde_json v1.0.64 [INFO] [stderr] Checking crossbeam-epoch v0.9.4 [INFO] [stderr] Checking crossbeam-channel v0.5.1 [INFO] [stderr] Compiling serde_derive v1.0.125 [INFO] [stderr] Checking ppv-lite86 v0.2.10 [INFO] [stderr] Checking crossbeam-deque v0.8.0 [INFO] [stderr] Checking flate2 v1.0.20 [INFO] [stderr] Checking memmap v0.7.0 [INFO] [stderr] Checking either v1.6.1 [INFO] [stderr] Checking rand_chacha v0.2.2 [INFO] [stderr] Checking itoa v0.4.7 [INFO] [stderr] Checking rand v0.7.3 [INFO] [stderr] Compiling cexpr v0.4.0 [INFO] [stderr] Checking plotters v0.2.15 [INFO] [stderr] Compiling regex v1.5.4 [INFO] [stderr] Compiling env_logger v0.7.1 [INFO] [stderr] Checking d4-framefile v0.2.18 [INFO] [stderr] Compiling d4-hts v0.2.18 [INFO] [stderr] Compiling d4-bigwig v0.2.18 [INFO] [stderr] error: failed to run custom build command for `d4-hts v0.2.18` [INFO] [stderr] note: To improve backtraces for build dependencies, set the CARGO_PROFILE_DEV_BUILD_OVERRIDE_DEBUG=true environment variable to enable debug information generation. [INFO] [stderr] [INFO] [stderr] Caused by: [INFO] [stderr] process didn't exit successfully: `/opt/rustwide/target/debug/build/d4-hts-4f60aa2bb1aed767/build-script-build` (exit status: 101) [INFO] [stderr] --- stderr [INFO] [stderr] + pushd /opt/rustwide/target/debug/build/d4-hts-df3a62f34f427025/out [INFO] [stderr] + HTSLIB_VERSION=1.11 [INFO] [stderr] + rm -rf /opt/rustwide/target/debug/build/d4-hts-df3a62f34f427025/out/htslib [INFO] [stderr] + git clone -b 1.11 https://github.com/samtools/htslib.git [INFO] [stderr] Cloning into 'htslib'... [INFO] [stderr] fatal: unable to access 'https://github.com/samtools/htslib.git/': Could not resolve host: github.com [INFO] [stderr] [INFO] [stderr] thread 'main' (1680) panicked at /opt/rustwide/cargo-home/registry/src/index.crates.io-1949cf8c6b5b557f/d4-hts-0.2.18/build.rs:33:5: [INFO] [stderr] assertion failed: Command::new("bash").args(&["build_htslib.sh", [INFO] [stderr] &version]).stdout(std::process::Stdio::null()).spawn().expect("Unable to build htslib").wait().unwrap().success() [INFO] [stderr] stack backtrace: [INFO] [stderr] 0: 0x595dffef6ed2 - std::backtrace_rs::backtrace::libunwind::trace::h105f921882c12e03 [INFO] [stderr] at /rustc/a4980311fb7bb9e7893708e6bd3fbbfb2819fd3d/library/std/src/../../backtrace/src/backtrace/libunwind.rs:117:9 [INFO] [stderr] 1: 0x595dffef6ed2 - std::backtrace_rs::backtrace::trace_unsynchronized::hc8b40918ba88bae2 [INFO] [stderr] at /rustc/a4980311fb7bb9e7893708e6bd3fbbfb2819fd3d/library/std/src/../../backtrace/src/backtrace/mod.rs:66:14 [INFO] [stderr] 2: 0x595dffef6ed2 - std::sys::backtrace::_print_fmt::h61144b3593b669a6 [INFO] [stderr] at /rustc/a4980311fb7bb9e7893708e6bd3fbbfb2819fd3d/library/std/src/sys/backtrace.rs:66:9 [INFO] [stderr] 3: 0x595dffef6ed2 - ::fmt::ha7f14f4d725d0e1f [INFO] [stderr] at /rustc/a4980311fb7bb9e7893708e6bd3fbbfb2819fd3d/library/std/src/sys/backtrace.rs:39:26 [INFO] [stderr] 4: 0x595dfff1ac7f - core::fmt::rt::Argument::fmt::h291cffbfb6f5f437 [INFO] [stderr] at /rustc/a4980311fb7bb9e7893708e6bd3fbbfb2819fd3d/library/core/src/fmt/rt.rs:173:76 [INFO] [stderr] 5: 0x595dfff1ac7f - core::fmt::write::h613c8eb2432c6a8e [INFO] [stderr] at /rustc/a4980311fb7bb9e7893708e6bd3fbbfb2819fd3d/library/core/src/fmt/mod.rs:1468:25 [INFO] [stderr] 6: 0x595dffee8143 - std::io::default_write_fmt::h1b19b0ce9c092acc [INFO] [stderr] at /rustc/a4980311fb7bb9e7893708e6bd3fbbfb2819fd3d/library/std/src/io/mod.rs:639:11 [INFO] [stderr] 7: 0x595dffee8143 - std::io::Write::write_fmt::ha60efb35d66e9b8c [INFO] [stderr] at /rustc/a4980311fb7bb9e7893708e6bd3fbbfb2819fd3d/library/std/src/io/mod.rs:1954:13 [INFO] [stderr] 8: 0x595dffef71e2 - std::sys::backtrace::BacktraceLock::print::hb1963680433203b9 [INFO] [stderr] at /rustc/a4980311fb7bb9e7893708e6bd3fbbfb2819fd3d/library/std/src/sys/backtrace.rs:42:9 [INFO] [stderr] 9: 0x595dffee4b9c - std::panicking::default_hook::{{closure}}::h12644fad1f9f9c3f [INFO] [stderr] at /rustc/a4980311fb7bb9e7893708e6bd3fbbfb2819fd3d/library/std/src/panicking.rs:301:27 [INFO] [stderr] 10: 0x595dffee49d6 - std::panicking::default_hook::h92d7423bfb093343 [INFO] [stderr] at /rustc/a4980311fb7bb9e7893708e6bd3fbbfb2819fd3d/library/std/src/panicking.rs:328:9 [INFO] [stderr] 11: 0x595dffee42c1 - std::panicking::panic_with_hook::hfd863520fce8e281 [INFO] [stderr] at /rustc/a4980311fb7bb9e7893708e6bd3fbbfb2819fd3d/library/std/src/panicking.rs:834:13 [INFO] [stderr] 12: 0x595dffef7266 - std::panicking::panic_handler::{{closure}}::h75bad88e9628e7c4 [INFO] [stderr] at /rustc/a4980311fb7bb9e7893708e6bd3fbbfb2819fd3d/library/std/src/panicking.rs:700:13 [INFO] [stderr] 13: 0x595dffef71f9 - std::sys::backtrace::__rust_end_short_backtrace::hba2ee9743eb3598b [INFO] [stderr] at /rustc/a4980311fb7bb9e7893708e6bd3fbbfb2819fd3d/library/std/src/sys/backtrace.rs:174:18 [INFO] [stderr] 14: 0x595dffee41fd - __rustc[d20f6e1e05d5ea87]::rust_begin_unwind [INFO] [stderr] at /rustc/a4980311fb7bb9e7893708e6bd3fbbfb2819fd3d/library/std/src/panicking.rs:698:5 [INFO] [stderr] 15: 0x595dfff22dd0 - core::panicking::panic_fmt::h291b19446b355b1a [INFO] [stderr] at /rustc/a4980311fb7bb9e7893708e6bd3fbbfb2819fd3d/library/core/src/panicking.rs:75:14 [INFO] [stderr] 16: 0x595dfff22f5c - core::panicking::panic::h9796160df06d7a48 [INFO] [stderr] at /rustc/a4980311fb7bb9e7893708e6bd3fbbfb2819fd3d/library/core/src/panicking.rs:145:5 [INFO] [stderr] 17: 0x595dffb36654 - build_script_build::build_own_htslib::he112d78f74ec116c [INFO] [stderr] 18: 0x595dffb35cab - build_script_build::main::h0c542411d8865840 [INFO] [stderr] 19: 0x595dffb34093 - core::ops::function::FnOnce::call_once::hfa7aa909519cba16 [INFO] [stderr] 20: 0x595dffb34186 - std::sys::backtrace::__rust_begin_short_backtrace::hb926981f564be69c [INFO] [stderr] 21: 0x595dffb34809 - std::rt::lang_start::{{closure}}::h6fffea2d4c369fd1 [INFO] [stderr] 22: 0x595dffef7a40 - core::ops::function::impls:: for &F>::call_once::hd30f70589ce52217 [INFO] [stderr] at /rustc/a4980311fb7bb9e7893708e6bd3fbbfb2819fd3d/library/core/src/ops/function.rs:290:21 [INFO] [stderr] 23: 0x595dffef7a40 - std::panicking::catch_unwind::do_call::h229a800b64964a72 [INFO] [stderr] at /rustc/a4980311fb7bb9e7893708e6bd3fbbfb2819fd3d/library/std/src/panicking.rs:590:40 [INFO] [stderr] 24: 0x595dffef7a40 - std::panicking::catch_unwind::hf5b1c782bbaa8c87 [INFO] [stderr] at /rustc/a4980311fb7bb9e7893708e6bd3fbbfb2819fd3d/library/std/src/panicking.rs:553:19 [INFO] [stderr] 25: 0x595dffef7a40 - std::panic::catch_unwind::h44fb21a21f79e7af [INFO] [stderr] at /rustc/a4980311fb7bb9e7893708e6bd3fbbfb2819fd3d/library/std/src/panic.rs:359:14 [INFO] [stderr] 26: 0x595dffef7a40 - std::rt::lang_start_internal::{{closure}}::h3d19e32b9588f707 [INFO] [stderr] at /rustc/a4980311fb7bb9e7893708e6bd3fbbfb2819fd3d/library/std/src/rt.rs:175:24 [INFO] [stderr] 27: 0x595dffef7a40 - std::panicking::catch_unwind::do_call::hf0c858106eb39fbd [INFO] [stderr] at /rustc/a4980311fb7bb9e7893708e6bd3fbbfb2819fd3d/library/std/src/panicking.rs:590:40 [INFO] [stderr] 28: 0x595dffef7a40 - std::panicking::catch_unwind::h92692cc8e925ec21 [INFO] [stderr] at /rustc/a4980311fb7bb9e7893708e6bd3fbbfb2819fd3d/library/std/src/panicking.rs:553:19 [INFO] [stderr] 29: 0x595dffef7a40 - std::panic::catch_unwind::h4f023f48f37702a5 [INFO] [stderr] at /rustc/a4980311fb7bb9e7893708e6bd3fbbfb2819fd3d/library/std/src/panic.rs:359:14 [INFO] [stderr] 30: 0x595dffef7a40 - std::rt::lang_start_internal::h80fdaffb9834036d [INFO] [stderr] at /rustc/a4980311fb7bb9e7893708e6bd3fbbfb2819fd3d/library/std/src/rt.rs:171:5 [INFO] [stderr] 31: 0x595dffb34841 - std::rt::lang_start::hd9fcb01aa9bf5cf6 [INFO] [stderr] 32: 0x595dffb37b35 - main [INFO] [stderr] 33: 0x74204d4f21ca - [INFO] [stderr] 34: 0x74204d4f228b - __libc_start_main [INFO] [stderr] 35: 0x595dffb33685 - _start [INFO] [stderr] 36: 0x0 - [INFO] [stderr] warning: build failed, waiting for other jobs to finish... [INFO] running `Command { std: "docker" "inspect" "d7be58295594c890151f8a4b2cf3bd7f9d98cd2dce2f0a4a8d8720e7ce57bcbf", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "d7be58295594c890151f8a4b2cf3bd7f9d98cd2dce2f0a4a8d8720e7ce57bcbf", kill_on_drop: false }` [INFO] [stdout] d7be58295594c890151f8a4b2cf3bd7f9d98cd2dce2f0a4a8d8720e7ce57bcbf