[INFO] fetching crate openbabel 0.5.4... [INFO] checking openbabel-0.5.4 against master#350d0ef0ec0493e6d21cfb265cb8211a0e74d766 for pr-145342-1 [INFO] extracting crate openbabel 0.5.4 into /workspace/builds/worker-6-tc1/source [INFO] started tweaking crates.io crate openbabel 0.5.4 [INFO] removed 0 missing examples [INFO] finished tweaking crates.io crate openbabel 0.5.4 [INFO] tweaked toml for crates.io crate openbabel 0.5.4 written to /workspace/builds/worker-6-tc1/source/Cargo.toml [INFO] validating manifest of crates.io crate openbabel 0.5.4 on toolchain 350d0ef0ec0493e6d21cfb265cb8211a0e74d766 [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+350d0ef0ec0493e6d21cfb265cb8211a0e74d766" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] crate crates.io crate openbabel 0.5.4 already has a lockfile, it will not be regenerated [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+350d0ef0ec0493e6d21cfb265cb8211a0e74d766" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] Updating crates.io index [INFO] [stderr] Downloading crates ... [INFO] [stderr] Downloaded link-cplusplus v1.0.6 [INFO] [stderr] Downloaded chiral-db-sources v0.2.0 [INFO] [stderr] Downloaded cxxbridge-flags v1.0.67 [INFO] [stderr] Downloaded plotters-backend v0.3.2 [INFO] [stderr] Downloaded scratch v1.0.1 [INFO] [stderr] Downloaded cxx-build v1.0.68 [INFO] [stderr] Downloaded cxxbridge-macro v1.0.67 [INFO] [stderr] Downloaded cxx v1.0.67 [INFO] [stderr] Downloaded openbabel-sys v0.5.4+openbabel-3.1.1 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-6-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-6-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:7ad1b28ee6f5f7f699f6cf7015098d6ccdd96d6f2d78dd06228f5b4c9faf309c" "/opt/rustwide/cargo-home/bin/cargo" "+350d0ef0ec0493e6d21cfb265cb8211a0e74d766" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] 32bd460af7fa65ea6d4543879a111051cf709f6154c0271719dd3cf6eebb2a2b [INFO] running `Command { std: "docker" "start" "-a" "32bd460af7fa65ea6d4543879a111051cf709f6154c0271719dd3cf6eebb2a2b", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "32bd460af7fa65ea6d4543879a111051cf709f6154c0271719dd3cf6eebb2a2b", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "32bd460af7fa65ea6d4543879a111051cf709f6154c0271719dd3cf6eebb2a2b", kill_on_drop: false }` [INFO] [stdout] 32bd460af7fa65ea6d4543879a111051cf709f6154c0271719dd3cf6eebb2a2b [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-6-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-6-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:7ad1b28ee6f5f7f699f6cf7015098d6ccdd96d6f2d78dd06228f5b4c9faf309c" "/opt/rustwide/cargo-home/bin/cargo" "+350d0ef0ec0493e6d21cfb265cb8211a0e74d766" "check" "--frozen" "--all" "--all-targets" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] 3f34980336215fe5d98ccc66ff520a884000bd5c2b70c59bf8a5fcf6e368671a [INFO] running `Command { std: "docker" "start" "-a" "3f34980336215fe5d98ccc66ff520a884000bd5c2b70c59bf8a5fcf6e368671a", kill_on_drop: false }` [INFO] [stderr] Compiling proc-macro2 v1.0.93 [INFO] [stderr] Compiling unicode-ident v1.0.14 [INFO] [stderr] Compiling autocfg v1.1.0 [INFO] [stderr] Checking cfg-if v1.0.0 [INFO] [stderr] Compiling syn v1.0.91 [INFO] [stderr] Compiling unicode-xid v0.2.2 [INFO] [stderr] Compiling libc v0.2.126 [INFO] [stderr] Compiling cc v1.0.73 [INFO] [stderr] Compiling crossbeam-utils v0.8.8 [INFO] [stderr] Compiling serde_derive v1.0.137 [INFO] [stderr] Compiling scratch v1.0.1 [INFO] [stderr] Compiling serde v1.0.137 [INFO] [stderr] Checking lazy_static v1.4.0 [INFO] [stderr] Compiling cxxbridge-flags v1.0.67 [INFO] [stderr] Compiling unicode-width v0.1.9 [INFO] [stderr] Compiling termcolor v1.1.3 [INFO] [stderr] Compiling memoffset v0.6.5 [INFO] [stderr] Compiling crossbeam-epoch v0.9.8 [INFO] [stderr] Compiling codespan-reporting v0.11.1 [INFO] [stderr] Compiling rustversion v1.0.9 [INFO] [stderr] Compiling rayon-core v1.9.3 [INFO] [stderr] Compiling once_cell v1.20.2 [INFO] [stderr] Checking scopeguard v1.1.0 [INFO] [stderr] Compiling num-traits v0.2.15 [INFO] [stderr] Checking either v1.6.1 [INFO] [stderr] Compiling fs_extra v1.2.0 [INFO] [stderr] Compiling serde_json v1.0.81 [INFO] [stderr] Checking getrandom v0.2.7 [INFO] [stderr] Checking crossbeam-deque v0.8.1 [INFO] [stderr] Checking num_cpus v1.13.1 [INFO] [stderr] Checking crossbeam-channel v0.5.4 [INFO] [stderr] Compiling rayon v1.5.3 [INFO] [stderr] Checking rand_core v0.6.3 [INFO] [stderr] Checking half v2.4.1 [INFO] [stderr] Compiling quote v1.0.38 [INFO] [stderr] Checking plotters-backend v0.3.2 [INFO] [stderr] Checking ryu v1.0.10 [INFO] [stderr] Checking anstyle v1.0.10 [INFO] [stderr] Checking ciborium-io v0.2.2 [INFO] [stderr] Checking clap_lex v0.7.4 [INFO] [stderr] Compiling syn v2.0.96 [INFO] [stderr] Compiling heck v0.5.0 [INFO] [stderr] Checking ppv-lite86 v0.2.16 [INFO] [stderr] Compiling link-cplusplus v1.0.6 [INFO] [stderr] Compiling cxx v1.0.67 [INFO] [stderr] Checking itoa v1.0.2 [INFO] [stderr] Checking clap_builder v4.5.26 [INFO] [stderr] Checking plotters-svg v0.3.1 [INFO] [stderr] Checking ciborium-ll v0.2.2 [INFO] [stderr] Checking itertools v0.10.3 [INFO] [stderr] Checking same-file v1.0.6 [INFO] [stderr] Checking cast v0.3.0 [INFO] [stderr] Checking rand_chacha v0.3.1 [INFO] [stderr] Checking regex-syntax v0.6.26 [INFO] [stderr] Checking rand v0.8.5 [INFO] [stderr] Checking plotters v0.3.1 [INFO] [stderr] Checking walkdir v2.3.2 [INFO] [stderr] Checking regex v1.5.6 [INFO] [stderr] Checking criterion-plot v0.5.0 [INFO] [stderr] Checking is-terminal v0.4.13 [INFO] [stderr] Checking anes v0.1.6 [INFO] [stderr] Checking clap v4.5.26 [INFO] [stderr] Checking oorandom v11.1.3 [INFO] [stderr] Checking chiral-db-sources v0.2.0 [INFO] [stderr] Compiling strum_macros v0.26.4 [INFO] [stderr] Compiling cxx-build v1.0.68 [INFO] [stderr] Compiling cxxbridge-macro v1.0.67 [INFO] [stderr] Checking strum v0.26.3 [INFO] [stderr] Compiling openbabel-sys v0.5.4+openbabel-3.1.1 [INFO] [stderr] Checking ciborium v0.2.2 [INFO] [stderr] Checking tinytemplate v1.2.1 [INFO] [stderr] Checking criterion v0.5.1 [INFO] [stderr] Checking openbabel v0.5.4 (/opt/rustwide/workdir) [INFO] [stdout] warning: struct `StringForMol` is never constructed [INFO] [stdout] --> src/io/mod.rs:8:8 [INFO] [stdout] | [INFO] [stdout] 8 | struct StringForMol { [INFO] [stdout] | ^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(dead_code)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: method `as_str` is never used [INFO] [stdout] --> src/io/mod.rs:14:12 [INFO] [stdout] | [INFO] [stdout] 13 | impl StringForMol { [INFO] [stdout] | ----------------- method in this implementation [INFO] [stdout] 14 | pub fn as_str(&self) -> &str { [INFO] [stdout] | ^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: struct `FileForMol` is never constructed [INFO] [stdout] --> src/io/mod.rs:37:8 [INFO] [stdout] | [INFO] [stdout] 37 | struct FileForMol<'a> { [INFO] [stdout] | ^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: enum `InputFormat` is never used [INFO] [stdout] --> src/io/formats.rs:12:10 [INFO] [stdout] | [INFO] [stdout] 12 | pub enum InputFormat { [INFO] [stdout] | ^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] error[E0308]: mismatched types [INFO] [stdout] --> benches/fingerprint.rs:8:5 [INFO] [stdout] | [INFO] [stdout] 6 | fn get_ecfp(smiles: &String, fpg: &openbabel::fingerprint::FingerprintGenerator) -> cxx::UniquePtr> { [INFO] [stdout] | ----------------------------------- expected `UniquePtr>` because of return type [INFO] [stdout] 7 | let mol = openbabel::molecule::Molecule::new_from_smiles(smiles); [INFO] [stdout] 8 | fpg.get_fingerprint(&mol) [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^^^^ expected `UniquePtr>`, found `Vec` [INFO] [stdout] | [INFO] [stdout] = note: expected struct `UniquePtr>` [INFO] [stdout] found struct `Vec` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] For more information about this error, try `rustc --explain E0308`. [INFO] [stdout] [INFO] [stderr] error: could not compile `openbabel` (bench "fingerprint") due to 1 previous error [INFO] [stderr] warning: build failed, waiting for other jobs to finish... [INFO] running `Command { std: "docker" "inspect" "3f34980336215fe5d98ccc66ff520a884000bd5c2b70c59bf8a5fcf6e368671a", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "3f34980336215fe5d98ccc66ff520a884000bd5c2b70c59bf8a5fcf6e368671a", kill_on_drop: false }` [INFO] [stdout] 3f34980336215fe5d98ccc66ff520a884000bd5c2b70c59bf8a5fcf6e368671a