[INFO] fetching crate noodles-vcf 0.81.0... [INFO] testing noodles-vcf-0.81.0 against try#b6ae10aa7319b7ebb6c7b3331dd71a9d6c9c5b4b for pr-145330-1 [INFO] extracting crate noodles-vcf 0.81.0 into /workspace/builds/worker-5-tc2/source [INFO] started tweaking crates.io crate noodles-vcf 0.81.0 [INFO] removed 0 missing examples [INFO] finished tweaking crates.io crate noodles-vcf 0.81.0 [INFO] tweaked toml for crates.io crate noodles-vcf 0.81.0 written to /workspace/builds/worker-5-tc2/source/Cargo.toml [INFO] validating manifest of crates.io crate noodles-vcf 0.81.0 on toolchain b6ae10aa7319b7ebb6c7b3331dd71a9d6c9c5b4b [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+b6ae10aa7319b7ebb6c7b3331dd71a9d6c9c5b4b" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] crate crates.io crate noodles-vcf 0.81.0 already has a lockfile, it will not be regenerated [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+b6ae10aa7319b7ebb6c7b3331dd71a9d6c9c5b4b" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-5-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-5-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:e90291280db7d1fac5b66fc6dad9f9662629e7365a55743daf9bdf73ebc4ea79" "/opt/rustwide/cargo-home/bin/cargo" "+b6ae10aa7319b7ebb6c7b3331dd71a9d6c9c5b4b" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] 8c0f11e07e81ae11d963f220f816c493f2c607f8d84d836d62e54409e256f7f5 [INFO] running `Command { std: "docker" "start" "-a" "8c0f11e07e81ae11d963f220f816c493f2c607f8d84d836d62e54409e256f7f5", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "8c0f11e07e81ae11d963f220f816c493f2c607f8d84d836d62e54409e256f7f5", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "8c0f11e07e81ae11d963f220f816c493f2c607f8d84d836d62e54409e256f7f5", kill_on_drop: false }` [INFO] [stdout] 8c0f11e07e81ae11d963f220f816c493f2c607f8d84d836d62e54409e256f7f5 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-5-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-5-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:e90291280db7d1fac5b66fc6dad9f9662629e7365a55743daf9bdf73ebc4ea79" "/opt/rustwide/cargo-home/bin/cargo" "+b6ae10aa7319b7ebb6c7b3331dd71a9d6c9c5b4b" "build" "--frozen" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] 41aa8a35bffdaa8ef3476ce2bf1b4ef82eab76ca355869653890e958f2513e14 [INFO] running `Command { std: "docker" "start" "-a" "41aa8a35bffdaa8ef3476ce2bf1b4ef82eab76ca355869653890e958f2513e14", kill_on_drop: false }` [INFO] [stderr] Compiling zlib-rs v0.5.1 [INFO] [stderr] Compiling bit-vec v0.8.0 [INFO] [stderr] Compiling indexmap v2.11.0 [INFO] [stderr] Compiling crossbeam-channel v0.5.15 [INFO] [stderr] Compiling noodles-core v0.18.0 [INFO] [stderr] Compiling libz-rs-sys v0.5.1 [INFO] [stderr] Compiling flate2 v1.1.2 [INFO] [stderr] Compiling noodles-bgzf v0.43.0 [INFO] [stderr] Compiling noodles-csi v0.51.0 [INFO] [stderr] Compiling noodles-tabix v0.57.0 [INFO] [stderr] Compiling noodles-vcf v0.81.0 (/opt/rustwide/workdir) [INFO] [stderr] Finished `dev` profile [unoptimized + debuginfo] target(s) in 11.12s [INFO] running `Command { std: "docker" "inspect" "41aa8a35bffdaa8ef3476ce2bf1b4ef82eab76ca355869653890e958f2513e14", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "41aa8a35bffdaa8ef3476ce2bf1b4ef82eab76ca355869653890e958f2513e14", kill_on_drop: false }` [INFO] [stdout] 41aa8a35bffdaa8ef3476ce2bf1b4ef82eab76ca355869653890e958f2513e14 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-5-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-5-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:e90291280db7d1fac5b66fc6dad9f9662629e7365a55743daf9bdf73ebc4ea79" "/opt/rustwide/cargo-home/bin/cargo" "+b6ae10aa7319b7ebb6c7b3331dd71a9d6c9c5b4b" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] fe608fc916d468d7d78bc7d6062380de1fa0c966de11f8745c612149e5f69620 [INFO] running `Command { std: "docker" "start" "-a" "fe608fc916d468d7d78bc7d6062380de1fa0c966de11f8745c612149e5f69620", kill_on_drop: false }` [INFO] [stderr] Compiling syn v2.0.106 [INFO] [stderr] Compiling tokio-macros v2.5.0 [INFO] [stderr] Compiling tokio v1.47.1 [INFO] [stderr] Compiling noodles-vcf v0.81.0 (/opt/rustwide/workdir) [INFO] [stderr] Finished `test` profile [unoptimized + debuginfo] target(s) in 17.24s [INFO] running `Command { std: "docker" "inspect" "fe608fc916d468d7d78bc7d6062380de1fa0c966de11f8745c612149e5f69620", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "fe608fc916d468d7d78bc7d6062380de1fa0c966de11f8745c612149e5f69620", kill_on_drop: false }` [INFO] [stdout] fe608fc916d468d7d78bc7d6062380de1fa0c966de11f8745c612149e5f69620 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-5-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-5-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:e90291280db7d1fac5b66fc6dad9f9662629e7365a55743daf9bdf73ebc4ea79" "/opt/rustwide/cargo-home/bin/cargo" "+b6ae10aa7319b7ebb6c7b3331dd71a9d6c9c5b4b" "test" "--frozen", kill_on_drop: false }` [INFO] [stdout] 505c27dbcd4ebc031f369e960a0faf1410d76567ce670e24416e948c429dc843 [INFO] running `Command { std: "docker" "start" "-a" "505c27dbcd4ebc031f369e960a0faf1410d76567ce670e24416e948c429dc843", kill_on_drop: false }` [INFO] [stderr] Finished `test` profile [unoptimized + debuginfo] target(s) in 0.09s [INFO] [stderr] Running unittests src/lib.rs (/opt/rustwide/target/debug/deps/noodles_vcf-9cc0d43317d063de) [INFO] [stdout] [INFO] [stdout] running 195 tests [INFO] [stdout] test header::builder::tests::test_default ... ok [INFO] [stdout] test header::builder::tests::test_build ... ok [INFO] [stdout] test header::file_format::tests::test_default ... ok [INFO] [stdout] test header::parser::record::key::tests::test_parse_key ... ok [INFO] [stdout] test header::parser::builder::tests::test_default ... ok [INFO] [stdout] test header::parser::record::value::map::contig::tests::test_parse_contig ... ok [INFO] [stdout] test header::parser::record::value::map::field::tests::test_consume_separator ... ok [INFO] [stdout] test header::parser::record::value::map::field::value::string::tests::test_parse_raw_string ... ok [INFO] [stdout] test header::parser::record::value::map::field::value::tests::test_parse_value ... ok [INFO] [stdout] test header::parser::record::tests::test_consume_prefix ... ok [INFO] [stdout] test header::parser::record::value::map::format::tests::test_parse_format ... ok [INFO] [stdout] test header::parser::record::value::string::tests::test_parse_string ... ok [INFO] [stdout] test header::parser::record::value::map::info::number::tests::test_parse_number ... ok [INFO] [stdout] test header::parser::record::value::map::info::tests::test_parse_info ... ok [INFO] [stdout] test header::parser::record::value::map::format::ty::tests::test_parse_type ... ok [INFO] [stdout] test header::parser::tests::test_from_str_with_duplicate_map_id ... ok [INFO] [stdout] test header::parser::tests::test_from_str_with_invalid_headers ... ok [INFO] [stdout] test header::parser::tests::test_from_str_with_duplicate_sample_names ... ok [INFO] [stdout] test header::parser::tests::test_from_str_with_data_after_header ... ok [INFO] [stdout] test header::parser::tests::test_from_str ... ok [INFO] [stdout] test header::parser::record::value::map::filter::tests::test_parse_filter ... ok [INFO] [stdout] test header::parser::record::value::map::field::key::tests::test_parse_key ... ok [INFO] [stdout] test header::parser::record::value::map::other::tests::test_parse_other ... ok [INFO] [stdout] test header::parser::record::value::map::field::value::string::tests::test_parse_escaped_string ... ok [INFO] [stdout] test header::parser::record::value::string::file_format::tests::test_parse_file_format ... ok [INFO] [stdout] test header::parser::record::value::map::format::number::tests::test_parse_number ... ok [INFO] [stdout] test header::parser::record::value::map::other::tests::test_parse_pedigree ... ok [INFO] [stdout] test header::record::tests::test_from_str ... ok [INFO] [stdout] test header::parser::record::value::map::other::tests::test_parse_meta ... ok [INFO] [stdout] test header::record::value::map::format::ty::tests::test_fmt ... ok [INFO] [stdout] test header::record::key::tests::test_from ... ok [INFO] [stdout] test header::parser::tests::test_from_str_with_multiple_fileformats ... ok [INFO] [stdout] test header::record::value::map::format::ty::tests::test_from_str ... ok [INFO] [stdout] test header::record::value::map::contig::tag::tests::test_as_ref_str_for_standard ... ok [INFO] [stdout] test header::record::value::map::info::number::tests::test_default ... ok [INFO] [stdout] test header::record::value::map::info::ty::tests::test_from_str ... ok [INFO] [stdout] test header::parser::tests::test_from_str_with_missing_headers ... ok [INFO] [stdout] test header::record::value::map::format::number::tests::test_default ... ok [INFO] [stdout] test header::parser::tests::test_from_str_without_file_format ... ok [INFO] [stdout] test header::record::value::map::format::ty::tests::test_default ... ok [INFO] [stdout] test header::string_maps::tests::test_from_str_with_file_format ... ok [INFO] [stdout] test header::string_maps::tests::test_from_str_with_mixed_positions ... ok [INFO] [stdout] test header::parser::record::value::map::tests::test_is_map ... ok [INFO] [stdout] test header::string_maps::tests::test_default ... ok [INFO] [stdout] test header::string_maps::tests::test_parse_file_format ... ok [INFO] [stdout] test header::string_maps::tests::test_from_str_with_a_position_mismatch ... ok [INFO] [stdout] test header::string_maps::tests::test_from_str ... ok [INFO] [stdout] test io::reader::header::tests::test_read_raw_header ... ok [INFO] [stdout] test header::tests::test_default ... ok [INFO] [stdout] test io::indexed_reader::builder::tests::test_push_ext ... ok [INFO] [stdout] test header::string_maps::tests::test_try_from_vcf_header_for_string_maps ... ok [INFO] [stdout] test header::string_maps::tests::test_try_from_vcf_header_for_string_maps_with_idx ... ok [INFO] [stdout] test header::tests::test_insert_with_duplicate_keys ... ok [INFO] [stdout] test io::reader::header::tests::test_read_raw_header_with_missing_end_of_line ... ok [INFO] [stdout] test io::reader::header::tests::test_read_raw_header_with_no_header ... ok [INFO] [stdout] test io::reader::header::tests::test_read_raw_header_with_no_records ... ok [INFO] [stdout] test io::reader::header::tests::test_read_raw_header_with_multiple_buffer_fills ... ok [INFO] [stdout] test io::reader::record::tests::test_read_record ... ok [INFO] [stdout] test io::reader::record_buf::alternate_bases::tests::test_parse_alternate_bases ... ok [INFO] [stdout] test io::reader::record_buf::ids::id::tests::test_parse_id ... ok [INFO] [stdout] test io::reader::record_buf::filters::tests::test_parse_filters ... ok [INFO] [stdout] test io::reader::record_buf::info::field::value::tests::test_parse_value_with_character ... ok [INFO] [stdout] test io::reader::record_buf::ids::tests::test_parse_ids ... ok [INFO] [stdout] test io::reader::record_buf::info::field::tests::test_parse_field ... ok [INFO] [stdout] test io::reader::record_buf::info::field::value::tests::test_parse_value_with_flag ... ok [INFO] [stdout] test io::reader::record_buf::info::field::value::tests::test_parse_value_with_float ... ok [INFO] [stdout] test io::reader::record_buf::info::field::value::tests::test_parse_value_with_string ... ok [INFO] [stdout] test io::reader::record_buf::info::field::value::tests::test_parse_value_with_integer ... ok [INFO] [stdout] test io::reader::record_buf::position::tests::test_parse_position ... ok [INFO] [stdout] test io::reader::record_buf::reference_sequence_name::tests::test_parse_reference_sequence_name ... ok [INFO] [stdout] test io::reader::record_buf::samples::keys::tests::test_parse_keys ... ok [INFO] [stdout] test io::reader::record_buf::samples::tests::test_parse_samples ... ok [INFO] [stdout] test io::reader::record_buf::info::tests::test_parse_info ... ok [INFO] [stdout] test io::reader::record_buf::samples::values::tests::test_parse_values ... ok [INFO] [stdout] test io::reader::record_buf::samples::values::value::tests::test_parse_value_with_character ... ok [INFO] [stdout] test io::reader::tests::test_read_record ... ok [INFO] [stdout] test io::writer::header::record::key::tests::test_write_key ... ok [INFO] [stdout] test io::writer::header::record::tests::test_write_other ... ok [INFO] [stdout] test io::writer::header::record::value::file_format::tests::test_write_file_format ... ok [INFO] [stdout] test io::writer::header::record::value::map::alternative_allele::tests::test_write_alternative_allele ... ok [INFO] [stdout] test io::reader::tests::test_read_line ... ok [INFO] [stdout] test io::writer::header::record::value::map::contig::tests::test_write_contig ... ok [INFO] [stdout] test io::reader::record_buf::samples::values::value::tests::test_parse_value_with_float ... ok [INFO] [stdout] test io::writer::header::record::value::map::filter::tests::test_write_filter ... ok [INFO] [stdout] test io::reader::record_buf::samples::values::value::tests::test_parse_value_with_string ... ok [INFO] [stdout] test io::writer::header::record::value::map::format::tests::test_write_format ... ok [INFO] [stdout] test io::writer::header::record::value::map::info::number::tests::test_write_number ... ok [INFO] [stdout] test io::writer::header::record::value::map::info::tests::test_write_info ... ok [INFO] [stdout] test io::writer::header::record::value::map::meta::tests::test_write_meta ... ok [INFO] [stdout] test io::writer::header::record::value::map::other::tests::test_write_other ... ok [INFO] [stdout] test io::writer::header::record::value::map::tests::test_write_string ... ok [INFO] [stdout] test io::writer::header::tests::test_write_column_names ... ok [INFO] [stdout] test io::writer::header::record::value::map::format::number::tests::test_write_number ... ok [INFO] [stdout] test io::writer::header::tests::test_write_header ... ok [INFO] [stdout] test io::writer::record::alternate_bases::tests::test_is_valid ... ok [INFO] [stdout] test io::writer::record::alternate_bases::tests::test_write_alternate_bases ... ok [INFO] [stdout] test io::writer::record::filters::tests::test_is_valid ... ok [INFO] [stdout] test io::writer::record::ids::tests::test_is_valid ... ok [INFO] [stdout] test io::writer::record::filters::tests::test_write_filters ... ok [INFO] [stdout] test io::writer::record::ids::tests::test_write_ids ... ok [INFO] [stdout] test io::writer::record::info::field::key::tests::test_is_valid ... ok [INFO] [stdout] test io::writer::record::info::field::key::tests::test_write_key ... ok [INFO] [stdout] test io::writer::record::info::field::value::array::tests::test_write_array ... ok [INFO] [stdout] test io::writer::record::info::field::value::character::tests::test_write_character ... ok [INFO] [stdout] test io::writer::record::info::field::value::float::tests::test_write_float ... ok [INFO] [stdout] test io::writer::record::info::field::value::integer::tests::test_write_integer ... ok [INFO] [stdout] test io::writer::record::info::field::value::string::tests::test_write_string ... ok [INFO] [stdout] test io::writer::record::info::field::value::tests::test_write_value ... ok [INFO] [stdout] test io::writer::record::position::tests::test_write_position ... ok [INFO] [stdout] test io::writer::record::info::tests::test_write_info ... ok [INFO] [stdout] test io::writer::record::quality_score::tests::test_write_quality_score ... ok [INFO] [stdout] test io::writer::record::reference_bases::tests::test_resolve_base ... ok [INFO] [stdout] test io::writer::record::reference_bases::tests::test_write_reference_bases ... ok [INFO] [stdout] test io::writer::record::reference_sequence_name::tests::test_is_valid ... ok [INFO] [stdout] test io::writer::record::reference_sequence_name::tests::test_strip_symbol_delimiters ... ok [INFO] [stdout] test io::writer::record::samples::keys::tests::test_is_valid ... ok [INFO] [stdout] test io::writer::record::reference_sequence_name::tests::test_write_reference_sequence_name ... ok [INFO] [stdout] test io::writer::record::samples::keys::tests::test_write_keys ... ok [INFO] [stdout] test io::writer::record::samples::sample::value::array::tests::test_write_array ... ok [INFO] [stdout] test io::writer::record::samples::sample::value::character::tests::test_write_character ... ok [INFO] [stdout] test io::writer::record::samples::sample::value::float::tests::test_write_float ... ok [INFO] [stdout] test io::writer::record::samples::sample::value::genotype::tests::test_vcf_4_0_write_genotype ... ok [INFO] [stdout] test io::writer::record::samples::sample::value::genotype::tests::test_vcf_4_4_write_genotype ... ok [INFO] [stdout] test io::writer::record::samples::sample::value::genotype::tests::test_write_phasing ... ok [INFO] [stdout] test io::writer::record::samples::sample::value::genotype::tests::test_write_position ... ok [INFO] [stdout] test io::writer::record::samples::sample::value::integer::tests::test_write_integer ... ok [INFO] [stdout] test io::writer::record::samples::sample::value::string::tests::test_write_string ... ok [INFO] [stdout] test io::writer::record::samples::sample::value::tests::test_write_value ... ok [INFO] [stdout] test io::writer::record::tests::test_write_record ... ok [INFO] [stdout] test io::writer::record::samples::tests::test_write_samples ... ok [INFO] [stdout] test io::writer::tests::test_write_record_with_format ... ok [INFO] [stdout] test io::writer::header::record::value::map::info::ty::tests::test_write_type ... ok [INFO] [stdout] test io::writer::tests::test_write_variant_record ... ok [INFO] [stdout] test record::alternate_bases::tests::test_iter ... ok [INFO] [stdout] test io::writer::header::record::value::map::format::ty::tests::test_write_type ... ok [INFO] [stdout] test record::alternate_bases::tests::test_len ... ok [INFO] [stdout] test record::fields::bounds::tests::test_ranges ... ok [INFO] [stdout] test record::filters::tests::test_is_empty ... ok [INFO] [stdout] test record::filters::tests::test_iter ... ok [INFO] [stdout] test record::filters::tests::test_len ... ok [INFO] [stdout] test record::ids::tests::test_is_empty ... ok [INFO] [stdout] test record::ids::tests::test_iter ... ok [INFO] [stdout] test record::ids::tests::test_len ... ok [INFO] [stdout] test record::info::field::tests::test_next ... ok [INFO] [stdout] test io::writer::header::record::value::string::tests::test_write_string ... ok [INFO] [stdout] test record::info::field::value::tests::test_parse_character_value ... ok [INFO] [stdout] test record::alternate_bases::tests::test_is_empty ... ok [INFO] [stdout] test record::info::field::value::tests::test_parse_string_value ... ok [INFO] [stdout] test record::samples::keys::tests::test_iter ... ok [INFO] [stdout] test record::info::tests::test_get ... ok [INFO] [stdout] test record::samples::sample::tests::test_iter ... ok [INFO] [stdout] test record::info::tests::test_is_empty ... ok [INFO] [stdout] test record::info::tests::test_iter ... ok [INFO] [stdout] test record::samples::sample::tests::test_values ... ok [INFO] [stdout] test record::samples::series::tests::test_get ... ok [INFO] [stdout] test record::samples::series::tests::test_name ... ok [INFO] [stdout] test record::samples::series::value::tests::test_parse_value ... ok [INFO] [stdout] test record::samples::series::value::genotype::tests::test_iter ... ok [INFO] [stdout] test record::samples::tests::test_get_index ... ok [INFO] [stdout] test record::samples::tests::test_get ... ok [INFO] [stdout] test record::samples::tests::test_is_empty ... ok [INFO] [stdout] test record::samples::tests::test_iter ... ok [INFO] [stdout] test variant::record::info::field::value::array::values::tests::test_character_values ... ok [INFO] [stdout] test variant::record::info::field::value::array::values::tests::test_float_values ... ok [INFO] [stdout] test variant::record::info::field::value::array::values::tests::test_string_values ... ok [INFO] [stdout] test variant::record::info::field::value::array::values::tests::test_integer_values ... ok [INFO] [stdout] test record::samples::tests::test_select ... ok [INFO] [stdout] test variant::record::samples::keys::key::tests::test_fmt ... ok [INFO] [stdout] test variant::record::info::field::key::tests::test_values ... ok [INFO] [stdout] test variant::record::samples::series::value::array::values::tests::test_character_values ... ok [INFO] [stdout] test variant::record::samples::series::value::array::values::tests::test_float_values ... ok [INFO] [stdout] test variant::record::samples::series::value::array::values::tests::test_string_values ... ok [INFO] [stdout] test variant::record::samples::series::value::array::values::tests::test_integer_values ... ok [INFO] [stdout] test variant::record::tests::test_variant_end_with_samples_len ... ok [INFO] [stdout] test variant::record::tests::test_variant_end_with_info_sv_len ... ok [INFO] [stdout] test variant::record_buf::builder::tests::test_default ... ok [INFO] [stdout] test variant::record::tests::test_variant_end ... ok [INFO] [stdout] test variant::record_buf::info::tests::test_extend ... ok [INFO] [stdout] test variant::record::tests::test_variant_span ... ok [INFO] [stdout] test io::reader::record_buf::samples::values::value::tests::test_parse_value_with_integer ... ok [INFO] [stdout] test variant::record_buf::samples::series::tests::test_get ... ok [INFO] [stdout] test variant::record_buf::tests::test_default ... ok [INFO] [stdout] test variant::record_buf::samples::series::tests::test_name ... ok [INFO] [stdout] test variant::record_buf::samples::sample::value::genotype::allele::tests::test_from_str ... ok [INFO] [stdout] test header::parser::record::value::map::info::ty::tests::test_parse_type ... ok [INFO] [stdout] test header::parser::record::value::map::alternative_allele::tests::test_parse_filter ... ok [INFO] [stdout] test header::record::value::map::info::ty::tests::test_fmt ... ok [INFO] [stdout] test header::record::value::map::info::ty::tests::test_default ... ok [INFO] [stdout] test header::record::key::tests::test_fmt ... ok [INFO] [stdout] test header::record::key::other::tests::test_from_str ... ok [INFO] [stdout] test variant::record_buf::samples::sample::value::genotype::tests::test_from_str ... ok [INFO] [stdout] test io::reader::record_buf::reference_bases::tests::test_parse_reference_bases ... ok [INFO] [stdout] test io::reader::record_buf::quality_score::tests::test_parse_position ... ok [INFO] [stdout] test header::record::value::map::tag::other::tests::test_from_str ... ok [INFO] [stdout] test io::reader::record_buf::value::tests::test_percent_decode ... ok [INFO] [stdout] [INFO] [stdout] test result: ok. 195 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.13s [INFO] [stderr] Doc-tests noodles_vcf [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] running 133 tests [INFO] [stdout] test src/header.rs - header::Header::alternative_alleles_mut (line 281) ... ok [INFO] [stdout] test src/header.rs - header::Header::alternative_alleles (line 257) ... ok [INFO] [stdout] test src/fs/index.rs - fs::index::index (line 13) - compile ... ok [INFO] [stdout] test src/header.rs - header::Header::contigs (line 304) ... ok [INFO] [stdout] test src/header.rs - header::Header::contigs_mut (line 325) ... ok [INFO] [stdout] test src/header.rs - header::Header::builder (line 63) ... ok [INFO] [stdout] test src/header.rs - header::Header::file_format (line 77) ... ok [INFO] [stdout] test src/header.rs - header::Header::formats_mut (line 232) ... ok [INFO] [stdout] test src/header.rs - header::Header::formats (line 206) ... ok [INFO] [stdout] test src/header.rs - header::Header::file_format_mut (line 96) ... ok [INFO] [stdout] test src/header/builder.rs - header::builder::Builder::add_alternative_allele (line 136) ... ok [INFO] [stdout] test src/header.rs - header::Header::get (line 441) ... ok [INFO] [stdout] test src/header.rs - header::Header::filters_mut (line 186) ... ok [INFO] [stdout] test src/header.rs - header::Header::filters (line 165) ... ok [INFO] [stdout] test src/header.rs - header::Header::infos_mut (line 140) ... ok [INFO] [stdout] test src/header.rs - header::Header::infos (line 114) ... ok [INFO] [stdout] test src/header.rs - header::Header::insert (line 470) ... ok [INFO] [stdout] test src/header.rs - header::Header::other_records_mut (line 416) ... ok [INFO] [stdout] test src/header/builder.rs - header::builder::Builder::add_filter (line 81) ... ok [INFO] [stdout] test src/header/builder.rs - header::builder::Builder::build (line 285) ... ok [INFO] [stdout] test src/header/file_format.rs - header::file_format::FileFormat::minor (line 43) ... ok [INFO] [stdout] test src/header/file_format.rs - header::file_format::FileFormat::major (line 30) ... ok [INFO] [stdout] test src/header/builder.rs - header::builder::Builder::set_sample_names (line 195) ... ok [INFO] [stdout] test src/header/builder.rs - header::builder::Builder::set_file_format (line 33) ... ok [INFO] [stdout] test src/header/record/value/map.rs - header::record::value::map::Map::other_fields_mut (line 99) ... ok [INFO] [stdout] test src/header/builder.rs - header::builder::Builder::insert (line 247) ... ok [INFO] [stdout] test src/header.rs - header::Header::sample_names (line 345) ... ok [INFO] [stdout] test src/header/builder.rs - header::builder::Builder::add_contig (line 170) ... ok [INFO] [stdout] test src/header.rs - header::Header::sample_names_mut (line 369) ... ok [INFO] [stdout] test src/header/builder.rs - header::builder::Builder::add_info (line 51) ... ok [INFO] [stdout] test src/header/record/value/map/contig.rs - header::record::value::map::contig::Map::url (line 111) ... ok [INFO] [stdout] test src/header/builder.rs - header::builder::Builder::add_sample_name (line 220) ... ok [INFO] [stdout] test src/header/record/value/map/contig.rs - header::record::value::map::contig::Map::new (line 39) ... ok [INFO] [stdout] test src/header/record/value/map/contig.rs - header::record::value::map::contig::Map::md5_mut (line 94) ... ok [INFO] [stdout] test src/header/record/value/map/filter.rs - header::record::value::map::filter::Map::new (line 68) ... ok [INFO] [stdout] test src/header/record/value/map/alternative_allele.rs - header::record::value::map::alternative_allele::Map::new (line 36) ... ok [INFO] [stdout] test src/header/record/value/map/contig.rs - header::record::value::map::contig::Map::md5 (line 81) ... ok [INFO] [stdout] test src/header/record/value/map/format.rs - header::record::value::map::format::Map::new (line 73) ... ok [INFO] [stdout] test src/header/string_maps.rs - header::string_maps::StringMaps::contigs (line 76) ... ok [INFO] [stdout] test src/io/indexed_reader/builder.rs - io::indexed_reader::builder::Builder::build_from_path (line 44) - compile ... ok [INFO] [stdout] test src/header/record/value/map/contig.rs - header::record::value::map::contig::Map::url_mut (line 124) ... ok [INFO] [stdout] test src/header/record/value/map/filter.rs - header::record::value::map::filter::Map::pass (line 48) ... ok [INFO] [stdout] test src/io/reader.rs - io::reader::Reader (line 37) - compile ... ok [INFO] [stdout] test src/header/record/value/map/info.rs - header::record::value::map::info::Map::new (line 73) ... ok [INFO] [stdout] test src/header/record/value/map/other.rs - header::record::value::map::other::Map::new (line 31) ... ok [INFO] [stdout] test src/header.rs - header::Header::other_records (line 393) ... ok [INFO] [stdout] test src/header/builder.rs - header::builder::Builder::add_format (line 106) ... ok [INFO] [stdout] test src/header/string_maps/string_map.rs - header::string_maps::string_map::StringMap::get_index_of (line 32) ... ok [INFO] [stdout] test src/io/indexed_reader/builder.rs - io::indexed_reader::builder::Builder::set_index (line 25) ... ok [INFO] [stdout] test src/header/record/value/map/contig.rs - header::record::value::map::contig::Map::length (line 51) ... ok [INFO] [stdout] test src/header/string_maps.rs - header::string_maps::StringMaps::strings (line 38) ... ok [INFO] [stdout] test src/io/reader.rs - io::reader::Reader::query (line 333) - compile ... ok [INFO] [stdout] test src/header/record/key.rs - header::record::key::Key::other (line 91) ... ok [INFO] [stdout] test src/header/string_maps/string_map.rs - header::string_maps::string_map::StringMap::get_index (line 19) ... ok [INFO] [stdout] test src/io/reader/builder.rs - io::reader::builder::Builder::build_from_path (line 39) - compile ... ok [INFO] [stdout] test src/io/reader.rs - io::reader::Reader::header_reader (line 137) ... ok [INFO] [stdout] test src/io/reader.rs - io::reader::Reader::read_record_buf (line 200) ... ok [INFO] [stdout] test src/io/reader.rs - io::reader::Reader::records (line 297) ... ok [INFO] [stdout] test src/io/reader.rs - io::reader::Reader::read_header (line 168) ... ok [INFO] [stdout] test src/header/record/value/map/contig.rs - header::record::value::map::contig::Map::length_mut (line 64) ... ok [INFO] [stdout] test src/header/file_format.rs - header::file_format::FileFormat::new (line 18) ... ok [INFO] [stdout] test src/io/reader.rs - io::reader::Reader::get_mut (line 74) ... ok [INFO] [stdout] test src/io/indexed_reader/builder.rs - io::indexed_reader::builder::Builder::build_from_reader (line 69) ... ok [INFO] [stdout] test src/io/reader.rs - io::reader::Reader::new (line 107) ... ok [INFO] [stdout] test src/io/writer.rs - io::writer::Writer::get_mut (line 93) ... ok [INFO] [stdout] test src/io/writer.rs - io::writer::Writer::into_inner (line 106) ... ok [INFO] [stdout] test src/io/reader.rs - io::reader::Reader::read_record (line 272) ... ok [INFO] [stdout] test src/io/reader.rs - io::reader::Reader::record_bufs (line 239) ... ok [INFO] [stdout] test src/io/reader/builder.rs - io::reader::builder::Builder::build_from_reader (line 65) ... ok [INFO] [stdout] test src/io/writer.rs - io::writer::Writer::get_ref (line 80) ... ok [INFO] [stdout] test src/io/writer.rs - io::writer::Writer::new (line 68) ... ok [INFO] [stdout] test src/io/reader.rs - io::reader::Reader::into_inner (line 88) ... ok [INFO] [stdout] test src/io/reader/builder.rs - io::reader::builder::Builder::set_compression_method (line 23) ... ok [INFO] [stdout] test src/io/reader.rs - io::reader::Reader::get_ref (line 60) ... ok [INFO] [stdout] test src/io/writer/builder.rs - io::writer::builder::Builder::build_from_path (line 38) - compile ... ok [INFO] [stdout] test src/lib.rs - (line 7) - compile ... ok [INFO] [stdout] test src/io/writer.rs - io::writer::Writer (line 17) ... ok [INFO] [stdout] test src/variant/record_buf.rs - variant::record_buf::RecordBuf::alternate_bases_mut (line 220) ... ok [INFO] [stdout] test src/variant/record_buf.rs - variant::record_buf::RecordBuf::builder (line 40) ... ok [INFO] [stdout] test src/io/writer.rs - io::writer::Writer::write_record (line 137) ... ok [INFO] [stdout] test src/variant/record_buf.rs - variant::record_buf::RecordBuf::ids (line 128) ... ok [INFO] [stdout] test src/variant/record_buf.rs - variant::record_buf::RecordBuf::reference_bases_mut (line 182) ... ok [INFO] [stdout] test src/variant/record_buf.rs - variant::record_buf::RecordBuf::reference_bases (line 165) ... ok [INFO] [stdout] test src/io/writer.rs - io::writer::Writer::write_header (line 119) ... ok [INFO] [stdout] test src/variant/record_buf.rs - variant::record_buf::RecordBuf::info (line 307) ... ok [INFO] [stdout] test src/io/writer/builder.rs - io::writer::builder::Builder::build_from_writer (line 66) ... ok [INFO] [stdout] test src/variant/record_buf.rs - variant::record_buf::RecordBuf::filters_mut (line 292) ... ok [INFO] [stdout] test src/variant/record_buf.rs - variant::record_buf::RecordBuf::ids_mut (line 147) ... ok [INFO] [stdout] test src/variant/record_buf.rs - variant::record_buf::RecordBuf::alternate_bases (line 201) ... ok [INFO] [stdout] test src/variant/record_buf.rs - variant::record_buf::RecordBuf::reference_sequence_name (line 52) ... ok [INFO] [stdout] test src/variant/record_buf.rs - variant::record_buf::RecordBuf::quality_score (line 240) ... ok [INFO] [stdout] test src/variant/record_buf.rs - variant::record_buf::RecordBuf::quality_score_mut (line 257) ... ok [INFO] [stdout] test src/variant/record_buf.rs - variant::record_buf::RecordBuf::samples (line 409) ... ok [INFO] [stdout] test src/variant/record_buf.rs - variant::record_buf::RecordBuf::info_mut (line 337) ... ok [INFO] [stdout] test src/io/writer/builder.rs - io::writer::builder::Builder::set_compression_method (line 23) ... ok [INFO] [stdout] test src/variant/record_buf.rs - variant::record_buf::RecordBuf::variant_start_mut (line 112) ... ok [INFO] [stdout] test src/variant/record_buf.rs - variant::record_buf::RecordBuf::variant_start (line 91) ... ok [INFO] [stdout] test src/variant/record_buf.rs - variant::record_buf::RecordBuf::samples_mut (line 441) ... ok [INFO] [stdout] test src/variant/record_buf.rs - variant::record_buf::RecordBuf::format (line 377) ... ok [INFO] [stdout] test src/variant/record_buf/filters.rs - variant::record_buf::filters::Filters::pass (line 18) ... ok [INFO] [stdout] test src/variant/record_buf/info.rs - variant::record_buf::info::Info::get (line 45) ... ok [INFO] [stdout] test src/variant/record_buf/builder.rs - variant::record_buf::builder::Builder::set_reference_sequence_name (line 26) ... ok [INFO] [stdout] test src/variant/record_buf/filters.rs - variant::record_buf::filters::Filters::is_pass (line 31) ... ok [INFO] [stdout] test src/variant/record_buf/builder.rs - variant::record_buf::builder::Builder::set_quality_score (line 127) ... ok [INFO] [stdout] test src/variant/record_buf/builder.rs - variant::record_buf::builder::Builder::set_reference_bases (line 86) ... ok [INFO] [stdout] test src/variant/record_buf.rs - variant::record_buf::RecordBuf::filters (line 275) ... ok [INFO] [stdout] test src/variant/record_buf/info.rs - variant::record_buf::info::Info::clear (line 23) ... ok [INFO] [stdout] test src/variant/record_buf/builder.rs - variant::record_buf::builder::Builder::set_info (line 163) ... ok [INFO] [stdout] test src/variant/record_buf/info.rs - variant::record_buf::info::Info::get_index (line 96) ... ok [INFO] [stdout] test src/variant/record_buf/builder.rs - variant::record_buf::builder::Builder::set_alternate_bases (line 107) ... ok [INFO] [stdout] test src/variant/record_buf/info.rs - variant::record_buf::info::Info::get_mut (line 69) ... ok [INFO] [stdout] test src/variant/record_buf/info.rs - variant::record_buf::info::Info::get_index_mut (line 123) ... ok [INFO] [stdout] test src/variant/record_buf/info.rs - variant::record_buf::info::Info::insert (line 153) ... ok [INFO] [stdout] test src/variant/record_buf/info.rs - variant::record_buf::info::Info::values (line 200) ... ok [INFO] [stdout] test src/variant/record_buf/samples/sample/value/genotype/allele.rs - variant::record_buf::samples::sample::value::genotype::allele::Allele::phasing (line 70) ... ok [INFO] [stdout] test src/variant/record_buf/samples/sample/value/genotype/allele.rs - variant::record_buf::samples::sample::value::genotype::allele::Allele::phasing_mut (line 87) ... ok [INFO] [stdout] test src/variant/record_buf.rs - variant::record_buf::RecordBuf::reference_sequence_name_mut (line 69) ... ok [INFO] [stdout] test src/variant/record_buf/builder.rs - variant::record_buf::builder::Builder::build (line 228) ... ok [INFO] [stdout] test src/variant/record_buf/samples.rs - variant::record_buf::samples::Samples::is_empty (line 37) ... ok [INFO] [stdout] test src/variant/record_buf/samples.rs - variant::record_buf::samples::Samples::keys_mut (line 96) ... ok [INFO] [stdout] test src/variant/record_buf/samples.rs - variant::record_buf::samples::Samples::select (line 170) ... ok [INFO] [stdout] test src/variant/record_buf/samples.rs - variant::record_buf::samples::Samples::clear (line 50) ... ok [INFO] [stdout] test src/variant/record_buf/info.rs - variant::record_buf::info::Info::keys (line 176) ... ok [INFO] [stdout] test src/variant/record_buf/samples.rs - variant::record_buf::samples::Samples::get (line 124) ... ok [INFO] [stdout] test src/variant/record_buf/samples.rs - variant::record_buf::samples::Samples::new (line 25) ... ok [INFO] [stdout] test src/variant/record_buf/samples/sample/value/genotype/allele.rs - variant::record_buf::samples::sample::value::genotype::allele::Allele::position_mut (line 52) ... ok [INFO] [stdout] test src/variant/record_buf/samples/sample/value/genotype/allele.rs - variant::record_buf::samples::sample::value::genotype::allele::Allele::new (line 19) ... ok [INFO] [stdout] test src/variant/record_buf/samples.rs - variant::record_buf::samples::Samples::keys (line 75) ... ok [INFO] [stdout] test src/variant/record_buf/builder.rs - variant::record_buf::builder::Builder::set_ids (line 66) ... ok [INFO] [stdout] test src/variant/record_buf/builder.rs - variant::record_buf::builder::Builder::set_filters (line 145) ... ok [INFO] [stdout] test src/variant/record_buf/samples/sample/value/genotype/allele.rs - variant::record_buf::samples::sample::value::genotype::allele::Allele::position (line 35) ... ok [INFO] [stdout] test src/variant/record_buf/builder.rs - variant::record_buf::builder::Builder::set_samples (line 194) ... ok [INFO] [stdout] test src/variant/record_buf/builder.rs - variant::record_buf::builder::Builder::set_variant_start (line 47) ... ok [INFO] [stdout] [INFO] [stdout] test result: ok. 133 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.11s [INFO] [stdout] [INFO] running `Command { std: "docker" "inspect" "505c27dbcd4ebc031f369e960a0faf1410d76567ce670e24416e948c429dc843", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "505c27dbcd4ebc031f369e960a0faf1410d76567ce670e24416e948c429dc843", kill_on_drop: false }` [INFO] [stdout] 505c27dbcd4ebc031f369e960a0faf1410d76567ce670e24416e948c429dc843