[INFO] fetching crate krakenuniq-rs 0.0.4... [INFO] testing krakenuniq-rs-0.0.4 against try#b6ae10aa7319b7ebb6c7b3331dd71a9d6c9c5b4b for pr-145330-1 [INFO] extracting crate krakenuniq-rs 0.0.4 into /workspace/builds/worker-2-tc2/source [INFO] started tweaking crates.io crate krakenuniq-rs 0.0.4 [INFO] finished tweaking crates.io crate krakenuniq-rs 0.0.4 [INFO] tweaked toml for crates.io crate krakenuniq-rs 0.0.4 written to /workspace/builds/worker-2-tc2/source/Cargo.toml [INFO] validating manifest of crates.io crate krakenuniq-rs 0.0.4 on toolchain b6ae10aa7319b7ebb6c7b3331dd71a9d6c9c5b4b [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+b6ae10aa7319b7ebb6c7b3331dd71a9d6c9c5b4b" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] crate crates.io crate krakenuniq-rs 0.0.4 already has a lockfile, it will not be regenerated [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+b6ae10aa7319b7ebb6c7b3331dd71a9d6c9c5b4b" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:e90291280db7d1fac5b66fc6dad9f9662629e7365a55743daf9bdf73ebc4ea79" "/opt/rustwide/cargo-home/bin/cargo" "+b6ae10aa7319b7ebb6c7b3331dd71a9d6c9c5b4b" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] f35225f88054fd848b1bd54b1d731dbc21cede784f2ef59446eb38ea8476bbdc [INFO] running `Command { std: "docker" "start" "-a" "f35225f88054fd848b1bd54b1d731dbc21cede784f2ef59446eb38ea8476bbdc", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "f35225f88054fd848b1bd54b1d731dbc21cede784f2ef59446eb38ea8476bbdc", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "f35225f88054fd848b1bd54b1d731dbc21cede784f2ef59446eb38ea8476bbdc", kill_on_drop: false }` [INFO] [stdout] f35225f88054fd848b1bd54b1d731dbc21cede784f2ef59446eb38ea8476bbdc [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:e90291280db7d1fac5b66fc6dad9f9662629e7365a55743daf9bdf73ebc4ea79" "/opt/rustwide/cargo-home/bin/cargo" "+b6ae10aa7319b7ebb6c7b3331dd71a9d6c9c5b4b" "build" "--frozen" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] d9946397917143c46761ec1fd2d9d92dac07d55ca91c84d9f120a928d863d075 [INFO] running `Command { std: "docker" "start" "-a" "d9946397917143c46761ec1fd2d9d92dac07d55ca91c84d9f120a928d863d075", kill_on_drop: false }` [INFO] [stderr] Compiling quote v1.0.38 [INFO] [stderr] Compiling syn v1.0.109 [INFO] [stderr] Compiling regex-syntax v0.8.5 [INFO] [stderr] Compiling portable-atomic v1.10.0 [INFO] [stderr] Compiling ahash v0.8.11 [INFO] [stderr] Compiling thiserror v2.0.9 [INFO] [stderr] Compiling unicode-width v0.2.0 [INFO] [stderr] Compiling getrandom v0.2.15 [INFO] [stderr] Compiling parking_lot_core v0.9.10 [INFO] [stderr] Compiling anstream v0.6.18 [INFO] [stderr] Compiling miniz_oxide v0.8.2 [INFO] [stderr] Compiling humantime v2.1.0 [INFO] [stderr] Compiling maplit v1.0.2 [INFO] [stderr] Compiling either v1.13.0 [INFO] [stderr] Compiling rayon-core v1.12.1 [INFO] [stderr] Compiling syn v2.0.93 [INFO] [stderr] Compiling parking_lot v0.12.3 [INFO] [stderr] Compiling console v0.15.10 [INFO] [stderr] Compiling flate2 v1.0.35 [INFO] [stderr] Compiling rayon v1.10.0 [INFO] [stderr] Compiling indicatif v0.17.9 [INFO] [stderr] Compiling regex-automata v0.4.9 [INFO] [stderr] Compiling thiserror-impl v2.0.9 [INFO] [stderr] Compiling strum_macros v0.24.3 [INFO] [stderr] Compiling strum v0.24.1 [INFO] [stderr] Compiling spinners v4.1.1 [INFO] [stderr] Compiling regex v1.11.1 [INFO] [stderr] Compiling env_filter v0.1.3 [INFO] [stderr] Compiling env_logger v0.11.6 [INFO] [stderr] Compiling krakenuniq-rs v0.0.4 (/opt/rustwide/workdir) [INFO] [stdout] warning: unused import: `std::collections::BTreeMap` [INFO] [stdout] --> src/krakendb.rs:3:5 [INFO] [stdout] | [INFO] [stdout] 3 | use std::collections::BTreeMap; [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_imports)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused imports: `BufRead` and `BufReader` [INFO] [stdout] --> src/krakendb.rs:5:15 [INFO] [stdout] | [INFO] [stdout] 5 | use std::io::{BufRead, BufReader, Error as IoError, ErrorKind, Read, Seek, SeekFrom}; [INFO] [stdout] | ^^^^^^^ ^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused imports: `ErrorKind` and `Error` [INFO] [stdout] --> src/taxdb.rs:5:35 [INFO] [stdout] | [INFO] [stdout] 5 | use std::io::{BufRead, BufReader, Error, ErrorKind}; [INFO] [stdout] | ^^^^^ ^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `ahash::AHashMap` [INFO] [stdout] --> src/lib.rs:9:5 [INFO] [stdout] | [INFO] [stdout] 9 | use ahash::AHashMap; [INFO] [stdout] | ^^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `old_base` [INFO] [stdout] --> src/classify/classify_sequence.rs:41:29 [INFO] [stdout] | [INFO] [stdout] 41 | fn roll_kmer_2bit(old: u64, old_base: u8, new_base: u8, k: usize) -> (u64, bool) { [INFO] [stdout] | ^^^^^^^^ help: if this is intentional, prefix it with an underscore: `_old_base` [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_variables)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: variable does not need to be mutable [INFO] [stdout] --> src/classify/classify_sequence.rs:262:14 [INFO] [stdout] | [INFO] [stdout] 262 | let (mut encoded, valid) = encode_first_kmer(window); [INFO] [stdout] | ----^^^^^^^ [INFO] [stdout] | | [INFO] [stdout] | help: remove this `mut` [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_mut)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `t0` [INFO] [stdout] --> src/lib.rs:141:9 [INFO] [stdout] | [INFO] [stdout] 141 | let t0 = Instant::now(); [INFO] [stdout] | ^^ help: if this is intentional, prefix it with an underscore: `_t0` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `t1` [INFO] [stdout] --> src/lib.rs:147:9 [INFO] [stdout] | [INFO] [stdout] 147 | let t1 = Instant::now(); [INFO] [stdout] | ^^ help: if this is intentional, prefix it with an underscore: `_t1` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: function `roll_kmer_2bit` is never used [INFO] [stdout] --> src/classify/classify_sequence.rs:41:4 [INFO] [stdout] | [INFO] [stdout] 41 | fn roll_kmer_2bit(old: u64, old_base: u8, new_base: u8, k: usize) -> (u64, bool) { [INFO] [stdout] | ^^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(dead_code)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stderr] Finished `dev` profile [unoptimized + debuginfo] target(s) in 16.91s [INFO] running `Command { std: "docker" "inspect" "d9946397917143c46761ec1fd2d9d92dac07d55ca91c84d9f120a928d863d075", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "d9946397917143c46761ec1fd2d9d92dac07d55ca91c84d9f120a928d863d075", kill_on_drop: false }` [INFO] [stdout] d9946397917143c46761ec1fd2d9d92dac07d55ca91c84d9f120a928d863d075 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:e90291280db7d1fac5b66fc6dad9f9662629e7365a55743daf9bdf73ebc4ea79" "/opt/rustwide/cargo-home/bin/cargo" "+b6ae10aa7319b7ebb6c7b3331dd71a9d6c9c5b4b" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] 9b7efe21fc2f0b0088a5772a02e824297c93676c68fa4009c8c75d793cafc0f3 [INFO] running `Command { std: "docker" "start" "-a" "9b7efe21fc2f0b0088a5772a02e824297c93676c68fa4009c8c75d793cafc0f3", kill_on_drop: false }` [INFO] [stdout] warning: unused import: `std::collections::BTreeMap` [INFO] [stdout] --> src/krakendb.rs:3:5 [INFO] [stdout] | [INFO] [stdout] 3 | use std::collections::BTreeMap; [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_imports)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused imports: `BufRead` and `BufReader` [INFO] [stdout] --> src/krakendb.rs:5:15 [INFO] [stdout] | [INFO] [stdout] 5 | use std::io::{BufRead, BufReader, Error as IoError, ErrorKind, Read, Seek, SeekFrom}; [INFO] [stdout] | ^^^^^^^ ^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stderr] Compiling krakenuniq-rs v0.0.4 (/opt/rustwide/workdir) [INFO] [stdout] warning: unused imports: `ErrorKind` and `Error` [INFO] [stdout] --> src/taxdb.rs:5:35 [INFO] [stdout] | [INFO] [stdout] 5 | use std::io::{BufRead, BufReader, Error, ErrorKind}; [INFO] [stdout] | ^^^^^ ^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `ahash::AHashMap` [INFO] [stdout] --> src/lib.rs:9:5 [INFO] [stdout] | [INFO] [stdout] 9 | use ahash::AHashMap; [INFO] [stdout] | ^^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `old_base` [INFO] [stdout] --> src/classify/classify_sequence.rs:41:29 [INFO] [stdout] | [INFO] [stdout] 41 | fn roll_kmer_2bit(old: u64, old_base: u8, new_base: u8, k: usize) -> (u64, bool) { [INFO] [stdout] | ^^^^^^^^ help: if this is intentional, prefix it with an underscore: `_old_base` [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_variables)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: variable does not need to be mutable [INFO] [stdout] --> src/classify/classify_sequence.rs:262:14 [INFO] [stdout] | [INFO] [stdout] 262 | let (mut encoded, valid) = encode_first_kmer(window); [INFO] [stdout] | ----^^^^^^^ [INFO] [stdout] | | [INFO] [stdout] | help: remove this `mut` [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_mut)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `t0` [INFO] [stdout] --> src/lib.rs:141:9 [INFO] [stdout] | [INFO] [stdout] 141 | let t0 = Instant::now(); [INFO] [stdout] | ^^ help: if this is intentional, prefix it with an underscore: `_t0` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `t1` [INFO] [stdout] --> src/lib.rs:147:9 [INFO] [stdout] | [INFO] [stdout] 147 | let t1 = Instant::now(); [INFO] [stdout] | ^^ help: if this is intentional, prefix it with an underscore: `_t1` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: function `roll_kmer_2bit` is never used [INFO] [stdout] --> src/classify/classify_sequence.rs:41:4 [INFO] [stdout] | [INFO] [stdout] 41 | fn roll_kmer_2bit(old: u64, old_base: u8, new_base: u8, k: usize) -> (u64, bool) { [INFO] [stdout] | ^^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(dead_code)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `std::collections::BTreeMap` [INFO] [stdout] --> src/krakendb.rs:3:5 [INFO] [stdout] | [INFO] [stdout] 3 | use std::collections::BTreeMap; [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_imports)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused imports: `BufRead` and `BufReader` [INFO] [stdout] --> src/krakendb.rs:5:15 [INFO] [stdout] | [INFO] [stdout] 5 | use std::io::{BufRead, BufReader, Error as IoError, ErrorKind, Read, Seek, SeekFrom}; [INFO] [stdout] | ^^^^^^^ ^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused imports: `ErrorKind` and `Error` [INFO] [stdout] --> src/taxdb.rs:5:35 [INFO] [stdout] | [INFO] [stdout] 5 | use std::io::{BufRead, BufReader, Error, ErrorKind}; [INFO] [stdout] | ^^^^^ ^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused import: `ahash::AHashMap` [INFO] [stdout] --> src/lib.rs:9:5 [INFO] [stdout] | [INFO] [stdout] 9 | use ahash::AHashMap; [INFO] [stdout] | ^^^^^^^^^^^^^^^ [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `old_base` [INFO] [stdout] --> src/classify/classify_sequence.rs:41:29 [INFO] [stdout] | [INFO] [stdout] 41 | fn roll_kmer_2bit(old: u64, old_base: u8, new_base: u8, k: usize) -> (u64, bool) { [INFO] [stdout] | ^^^^^^^^ help: if this is intentional, prefix it with an underscore: `_old_base` [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_variables)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: variable does not need to be mutable [INFO] [stdout] --> src/classify/classify_sequence.rs:262:14 [INFO] [stdout] | [INFO] [stdout] 262 | let (mut encoded, valid) = encode_first_kmer(window); [INFO] [stdout] | ----^^^^^^^ [INFO] [stdout] | | [INFO] [stdout] | help: remove this `mut` [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(unused_mut)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `t0` [INFO] [stdout] --> src/lib.rs:141:9 [INFO] [stdout] | [INFO] [stdout] 141 | let t0 = Instant::now(); [INFO] [stdout] | ^^ help: if this is intentional, prefix it with an underscore: `_t0` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: unused variable: `t1` [INFO] [stdout] --> src/lib.rs:147:9 [INFO] [stdout] | [INFO] [stdout] 147 | let t1 = Instant::now(); [INFO] [stdout] | ^^ help: if this is intentional, prefix it with an underscore: `_t1` [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: function `roll_kmer_2bit` is never used [INFO] [stdout] --> src/classify/classify_sequence.rs:41:4 [INFO] [stdout] | [INFO] [stdout] 41 | fn roll_kmer_2bit(old: u64, old_base: u8, new_base: u8, k: usize) -> (u64, bool) { [INFO] [stdout] | ^^^^^^^^^^^^^^ [INFO] [stdout] | [INFO] [stdout] = note: `#[warn(dead_code)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stderr] Finished `test` profile [unoptimized + debuginfo] target(s) in 1.84s [INFO] running `Command { std: "docker" "inspect" "9b7efe21fc2f0b0088a5772a02e824297c93676c68fa4009c8c75d793cafc0f3", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "9b7efe21fc2f0b0088a5772a02e824297c93676c68fa4009c8c75d793cafc0f3", kill_on_drop: false }` [INFO] [stdout] 9b7efe21fc2f0b0088a5772a02e824297c93676c68fa4009c8c75d793cafc0f3 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:e90291280db7d1fac5b66fc6dad9f9662629e7365a55743daf9bdf73ebc4ea79" "/opt/rustwide/cargo-home/bin/cargo" "+b6ae10aa7319b7ebb6c7b3331dd71a9d6c9c5b4b" "test" "--frozen", kill_on_drop: false }` [INFO] [stdout] fafd3e8edc7aadc56d0be3cfce1f9eda4dacc50643cc6abacecad75c55fc32b6 [INFO] running `Command { std: "docker" "start" "-a" "fafd3e8edc7aadc56d0be3cfce1f9eda4dacc50643cc6abacecad75c55fc32b6", kill_on_drop: false }` [INFO] [stderr] warning: unused import: `std::collections::BTreeMap` [INFO] [stderr] --> src/krakendb.rs:3:5 [INFO] [stderr] | [INFO] [stderr] 3 | use std::collections::BTreeMap; [INFO] [stderr] | ^^^^^^^^^^^^^^^^^^^^^^^^^^ [INFO] [stderr] | [INFO] [stderr] = note: `#[warn(unused_imports)]` on by default [INFO] [stderr] [INFO] [stderr] warning: unused imports: `BufRead` and `BufReader` [INFO] [stderr] --> src/krakendb.rs:5:15 [INFO] [stderr] | [INFO] [stderr] 5 | use std::io::{BufRead, BufReader, Error as IoError, ErrorKind, Read, Seek, SeekFrom}; [INFO] [stderr] | ^^^^^^^ ^^^^^^^^^ [INFO] [stderr] [INFO] [stderr] warning: unused imports: `ErrorKind` and `Error` [INFO] [stderr] --> src/taxdb.rs:5:35 [INFO] [stderr] | [INFO] [stderr] 5 | use std::io::{BufRead, BufReader, Error, ErrorKind}; [INFO] [stderr] | ^^^^^ ^^^^^^^^^ [INFO] [stderr] [INFO] [stderr] warning: unused import: `ahash::AHashMap` [INFO] [stderr] --> src/lib.rs:9:5 [INFO] [stderr] | [INFO] [stderr] 9 | use ahash::AHashMap; [INFO] [stderr] | ^^^^^^^^^^^^^^^ [INFO] [stderr] [INFO] [stderr] warning: unused variable: `old_base` [INFO] [stderr] --> src/classify/classify_sequence.rs:41:29 [INFO] [stderr] | [INFO] [stderr] 41 | fn roll_kmer_2bit(old: u64, old_base: u8, new_base: u8, k: usize) -> (u64, bool) { [INFO] [stderr] | ^^^^^^^^ help: if this is intentional, prefix it with an underscore: `_old_base` [INFO] [stderr] | [INFO] [stderr] = note: `#[warn(unused_variables)]` on by default [INFO] [stderr] [INFO] [stderr] warning: variable does not need to be mutable [INFO] [stderr] --> src/classify/classify_sequence.rs:262:14 [INFO] [stderr] | [INFO] [stderr] 262 | let (mut encoded, valid) = encode_first_kmer(window); [INFO] [stderr] | ----^^^^^^^ [INFO] [stderr] | | [INFO] [stderr] | help: remove this `mut` [INFO] [stderr] | [INFO] [stderr] = note: `#[warn(unused_mut)]` on by default [INFO] [stderr] [INFO] [stderr] warning: unused variable: `t0` [INFO] [stderr] --> src/lib.rs:141:9 [INFO] [stderr] | [INFO] [stderr] 141 | let t0 = Instant::now(); [INFO] [stderr] | ^^ help: if this is intentional, prefix it with an underscore: `_t0` [INFO] [stderr] [INFO] [stderr] warning: unused variable: `t1` [INFO] [stderr] --> src/lib.rs:147:9 [INFO] [stderr] | [INFO] [stderr] 147 | let t1 = Instant::now(); [INFO] [stderr] | ^^ help: if this is intentional, prefix it with an underscore: `_t1` [INFO] [stderr] [INFO] [stderr] warning: function `roll_kmer_2bit` is never used [INFO] [stderr] --> src/classify/classify_sequence.rs:41:4 [INFO] [stderr] | [INFO] [stderr] 41 | fn roll_kmer_2bit(old: u64, old_base: u8, new_base: u8, k: usize) -> (u64, bool) { [INFO] [stderr] | ^^^^^^^^^^^^^^ [INFO] [stderr] | [INFO] [stderr] = note: `#[warn(dead_code)]` on by default [INFO] [stderr] [INFO] [stderr] warning: `krakenuniq-rs` (lib) generated 9 warnings (run `cargo fix --lib -p krakenuniq-rs` to apply 5 suggestions) [INFO] [stderr] warning: `krakenuniq-rs` (lib test) generated 9 warnings (9 duplicates) [INFO] [stderr] Finished `test` profile [unoptimized + debuginfo] target(s) in 0.12s [INFO] [stderr] Running unittests src/lib.rs (/opt/rustwide/target/debug/deps/krakenuniq_rs-87d84e4c32da158e) [INFO] [stdout] [INFO] [stdout] running 1 test [INFO] [stdout] test tests::test_classify_reads_api ... FAILED [INFO] [stdout] [INFO] [stdout] failures: [INFO] [stdout] [INFO] [stdout] ---- tests::test_classify_reads_api stdout ---- [INFO] [stdout] [INFO] [stdout] thread 'tests::test_classify_reads_api' (25) panicked at src/lib.rs:222:14: [INFO] [stdout] Cannot read directory 'barcode03': Os { code: 2, kind: NotFound, message: "No such file or directory" } [INFO] [stdout] stack backtrace: [INFO] [stdout] 0: 0x5c5525997a72 - std::backtrace_rs::backtrace::libunwind::trace::hc4a5f428cfb78751 [INFO] [stdout] at /rustc/b6ae10aa7319b7ebb6c7b3331dd71a9d6c9c5b4b/library/std/src/../../backtrace/src/backtrace/libunwind.rs:117:9 [INFO] [stdout] 1: 0x5c5525997a72 - std::backtrace_rs::backtrace::trace_unsynchronized::h20e1095684b4c296 [INFO] [stdout] at /rustc/b6ae10aa7319b7ebb6c7b3331dd71a9d6c9c5b4b/library/std/src/../../backtrace/src/backtrace/mod.rs:66:14 [INFO] [stdout] 2: 0x5c5525997a72 - std::sys::backtrace::_print_fmt::h461f2e3a8f6b29e2 [INFO] [stdout] at /rustc/b6ae10aa7319b7ebb6c7b3331dd71a9d6c9c5b4b/library/std/src/sys/backtrace.rs:66:9 [INFO] [stdout] 3: 0x5c5525997a72 - ::fmt::h4ee3a75aa71a2c45 [INFO] [stdout] at /rustc/b6ae10aa7319b7ebb6c7b3331dd71a9d6c9c5b4b/library/std/src/sys/backtrace.rs:39:26 [INFO] [stdout] 4: 0x5c55259bbbff - core::fmt::rt::Argument::fmt::h6f1564705cd089af [INFO] [stdout] at /rustc/b6ae10aa7319b7ebb6c7b3331dd71a9d6c9c5b4b/library/core/src/fmt/rt.rs:173:76 [INFO] [stdout] 5: 0x5c55259bbbff - core::fmt::write::h21ca93b65a7c281a [INFO] [stdout] at /rustc/b6ae10aa7319b7ebb6c7b3331dd71a9d6c9c5b4b/library/core/src/fmt/mod.rs:1468:25 [INFO] [stdout] 6: 0x5c5525984873 - std::io::default_write_fmt::h6f3360f4711e9130 [INFO] [stdout] at /rustc/b6ae10aa7319b7ebb6c7b3331dd71a9d6c9c5b4b/library/std/src/io/mod.rs:639:11 [INFO] [stdout] 7: 0x5c5525984873 - std::io::Write::write_fmt::hf4539125c0e0bc30 [INFO] [stdout] at /rustc/b6ae10aa7319b7ebb6c7b3331dd71a9d6c9c5b4b/library/std/src/io/mod.rs:1954:13 [INFO] [stdout] 8: 0x5c5525998082 - std::sys::backtrace::BacktraceLock::print::h58d5d73f9e953cf1 [INFO] [stdout] at /rustc/b6ae10aa7319b7ebb6c7b3331dd71a9d6c9c5b4b/library/std/src/sys/backtrace.rs:42:9 [INFO] [stdout] 9: 0x5c5525982d7c - std::panicking::default_hook::{{closure}}::h1457fbe47c9457d1 [INFO] [stdout] at /rustc/b6ae10aa7319b7ebb6c7b3331dd71a9d6c9c5b4b/library/std/src/panicking.rs:301:27 [INFO] [stdout] 10: 0x5c5525982bee - std::panicking::default_hook::hccb5e73b206c0830 [INFO] [stdout] at /rustc/b6ae10aa7319b7ebb6c7b3331dd71a9d6c9c5b4b/library/std/src/panicking.rs:325:9 [INFO] [stdout] 11: 0x5c55258ee26e - as core::ops::function::Fn>::call::h04940a86aa899793 [INFO] [stdout] at /rustc/b6ae10aa7319b7ebb6c7b3331dd71a9d6c9c5b4b/library/alloc/src/boxed.rs:1985:9 [INFO] [stdout] 12: 0x5c55258ee26e - test::test_main_with_exit_callback::{{closure}}::hca6cc295403b83e8 [INFO] [stdout] at /rustc/b6ae10aa7319b7ebb6c7b3331dd71a9d6c9c5b4b/library/test/src/lib.rs:145:21 [INFO] [stdout] 13: 0x5c5525983b03 - as core::ops::function::Fn>::call::h9d85285925beb538 [INFO] [stdout] at /rustc/b6ae10aa7319b7ebb6c7b3331dd71a9d6c9c5b4b/library/alloc/src/boxed.rs:1985:9 [INFO] [stdout] 14: 0x5c5525983b03 - std::panicking::panic_with_hook::h3190ecc6229cdd29 [INFO] [stdout] at /rustc/b6ae10aa7319b7ebb6c7b3331dd71a9d6c9c5b4b/library/std/src/panicking.rs:842:13 [INFO] [stdout] 15: 0x5c5525997e8a - std::panicking::panic_handler::{{closure}}::ha1f1b769bc2bb40c [INFO] [stdout] at /rustc/b6ae10aa7319b7ebb6c7b3331dd71a9d6c9c5b4b/library/std/src/panicking.rs:707:13 [INFO] [stdout] 16: 0x5c5525997de9 - std::sys::backtrace::__rust_end_short_backtrace::h5f9cf66f19c2a172 [INFO] [stdout] at /rustc/b6ae10aa7319b7ebb6c7b3331dd71a9d6c9c5b4b/library/std/src/sys/backtrace.rs:174:18 [INFO] [stdout] 17: 0x5c55259837ad - __rustc[a93bd50104b99ad4]::rust_begin_unwind [INFO] [stdout] at /rustc/b6ae10aa7319b7ebb6c7b3331dd71a9d6c9c5b4b/library/std/src/panicking.rs:698:5 [INFO] [stdout] 18: 0x5c55259c2f20 - core::panicking::panic_fmt::hc70c3c83f13c1375 [INFO] [stdout] at /rustc/b6ae10aa7319b7ebb6c7b3331dd71a9d6c9c5b4b/library/core/src/panicking.rs:75:14 [INFO] [stdout] 19: 0x5c55259c4966 - core::result::unwrap_failed::ha809bf80017a514a [INFO] [stdout] at /rustc/b6ae10aa7319b7ebb6c7b3331dd71a9d6c9c5b4b/library/core/src/result.rs:1852:5 [INFO] [stdout] 20: 0x5c55258dd778 - core::result::Result::expect::hddda69f4e2dd8511 [INFO] [stdout] at /rustc/b6ae10aa7319b7ebb6c7b3331dd71a9d6c9c5b4b/library/core/src/result.rs:1175:23 [INFO] [stdout] 21: 0x5c5525891d88 - krakenuniq_rs::tests::test_classify_reads_api::h59f144877a6ef85d [INFO] [stdout] at /opt/rustwide/workdir/src/lib.rs:222:14 [INFO] [stdout] 22: 0x5c5525891847 - krakenuniq_rs::tests::test_classify_reads_api::{{closure}}::h1786f7b346409c11 [INFO] [stdout] at /opt/rustwide/workdir/src/lib.rs:219:33 [INFO] [stdout] 23: 0x5c55258cbf26 - core::ops::function::FnOnce::call_once::h8f9ccd7b19fb1327 [INFO] [stdout] at /rustc/b6ae10aa7319b7ebb6c7b3331dd71a9d6c9c5b4b/library/core/src/ops/function.rs:253:5 [INFO] [stdout] 24: 0x5c55258ef2eb - core::ops::function::FnOnce::call_once::h70d190c46966003b [INFO] [stdout] at /rustc/b6ae10aa7319b7ebb6c7b3331dd71a9d6c9c5b4b/library/core/src/ops/function.rs:253:5 [INFO] [stdout] 25: 0x5c55258ef2eb - test::__rust_begin_short_backtrace::hb077ccaabb17d2ec [INFO] [stdout] at /rustc/b6ae10aa7319b7ebb6c7b3331dd71a9d6c9c5b4b/library/test/src/lib.rs:663:18 [INFO] [stdout] 26: 0x5c55258ecf55 - test::run_test_in_process::{{closure}}::hd73eeb633a1507bd [INFO] [stdout] at /rustc/b6ae10aa7319b7ebb6c7b3331dd71a9d6c9c5b4b/library/test/src/lib.rs:686:74 [INFO] [stdout] 27: 0x5c55258ecf55 - as core::ops::function::FnOnce<()>>::call_once::h033c82756fc9d192 [INFO] [stdout] at /rustc/b6ae10aa7319b7ebb6c7b3331dd71a9d6c9c5b4b/library/core/src/panic/unwind_safe.rs:272:9 [INFO] [stdout] 28: 0x5c55258ecf55 - std::panicking::catch_unwind::do_call::h734b44e243d34585 [INFO] [stdout] at /rustc/b6ae10aa7319b7ebb6c7b3331dd71a9d6c9c5b4b/library/std/src/panicking.rs:590:40 [INFO] [stdout] 29: 0x5c55258ecf55 - std::panicking::catch_unwind::h5e85417122517fb1 [INFO] [stdout] at /rustc/b6ae10aa7319b7ebb6c7b3331dd71a9d6c9c5b4b/library/std/src/panicking.rs:553:19 [INFO] [stdout] 30: 0x5c55258ecf55 - std::panic::catch_unwind::h0900e58a82a7d188 [INFO] [stdout] at /rustc/b6ae10aa7319b7ebb6c7b3331dd71a9d6c9c5b4b/library/std/src/panic.rs:359:14 [INFO] [stdout] 31: 0x5c55258ecf55 - test::run_test_in_process::h27721efd62ae77d0 [INFO] [stdout] at /rustc/b6ae10aa7319b7ebb6c7b3331dd71a9d6c9c5b4b/library/test/src/lib.rs:686:27 [INFO] [stdout] 32: 0x5c55258ecf55 - test::run_test::{{closure}}::h8b1264838cc597aa [INFO] [stdout] at /rustc/b6ae10aa7319b7ebb6c7b3331dd71a9d6c9c5b4b/library/test/src/lib.rs:607:43 [INFO] [stdout] 33: 0x5c5525913e64 - test::run_test::{{closure}}::h6ecb96835e2eae4f [INFO] [stdout] at /rustc/b6ae10aa7319b7ebb6c7b3331dd71a9d6c9c5b4b/library/test/src/lib.rs:637:41 [INFO] [stdout] 34: 0x5c5525913e64 - std::sys::backtrace::__rust_begin_short_backtrace::h098f38ee82a820a7 [INFO] [stdout] at /rustc/b6ae10aa7319b7ebb6c7b3331dd71a9d6c9c5b4b/library/std/src/sys/backtrace.rs:158:18 [INFO] [stdout] 35: 0x5c55258faa7a - std::thread::Builder::spawn_unchecked_::{{closure}}::{{closure}}::h042592f748f5e369 [INFO] [stdout] at /rustc/b6ae10aa7319b7ebb6c7b3331dd71a9d6c9c5b4b/library/std/src/thread/mod.rs:559:17 [INFO] [stdout] 36: 0x5c55258faa7a - as core::ops::function::FnOnce<()>>::call_once::h134fe7f3a2d9ec8d [INFO] [stdout] at /rustc/b6ae10aa7319b7ebb6c7b3331dd71a9d6c9c5b4b/library/core/src/panic/unwind_safe.rs:272:9 [INFO] [stdout] 37: 0x5c55258faa7a - std::panicking::catch_unwind::do_call::heb87d604f60aee16 [INFO] [stdout] at /rustc/b6ae10aa7319b7ebb6c7b3331dd71a9d6c9c5b4b/library/std/src/panicking.rs:590:40 [INFO] [stdout] 38: 0x5c55258faa7a - std::panicking::catch_unwind::h2203a0f553b89fd7 [INFO] [stdout] at /rustc/b6ae10aa7319b7ebb6c7b3331dd71a9d6c9c5b4b/library/std/src/panicking.rs:553:19 [INFO] [stdout] 39: 0x5c55258faa7a - std::panic::catch_unwind::h4d383e0b0e25d838 [INFO] [stdout] at /rustc/b6ae10aa7319b7ebb6c7b3331dd71a9d6c9c5b4b/library/std/src/panic.rs:359:14 [INFO] [stdout] 40: 0x5c55258faa7a - std::thread::Builder::spawn_unchecked_::{{closure}}::h76cbdd4635cfd58b [INFO] [stdout] at /rustc/b6ae10aa7319b7ebb6c7b3331dd71a9d6c9c5b4b/library/std/src/thread/mod.rs:557:30 [INFO] [stdout] 41: 0x5c55258faa7a - core::ops::function::FnOnce::call_once{{vtable.shim}}::he72e066680f5e267 [INFO] [stdout] at /rustc/b6ae10aa7319b7ebb6c7b3331dd71a9d6c9c5b4b/library/core/src/ops/function.rs:253:5 [INFO] [stdout] 42: 0x5c552596d21f - as core::ops::function::FnOnce>::call_once::h1b9c6fea2cbefc68 [INFO] [stdout] at /rustc/b6ae10aa7319b7ebb6c7b3331dd71a9d6c9c5b4b/library/alloc/src/boxed.rs:1971:9 [INFO] [stdout] 43: 0x5c552596d21f - std::sys::pal::unix::thread::Thread::new::thread_start::h92caa992bc760789 [INFO] [stdout] at /rustc/b6ae10aa7319b7ebb6c7b3331dd71a9d6c9c5b4b/library/std/src/sys/pal/unix/thread.rs:107:17 [INFO] [stdout] 44: 0x7f659d3a3aa4 - [INFO] [stdout] 45: 0x7f659d430a34 - clone [INFO] [stdout] 46: 0x0 - [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] failures: [INFO] [stdout] tests::test_classify_reads_api [INFO] [stdout] [INFO] [stdout] test result: FAILED. 0 passed; 1 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.06s [INFO] [stdout] [INFO] [stderr] error: test failed, to rerun pass `--lib` [INFO] running `Command { std: "docker" "inspect" "fafd3e8edc7aadc56d0be3cfce1f9eda4dacc50643cc6abacecad75c55fc32b6", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "fafd3e8edc7aadc56d0be3cfce1f9eda4dacc50643cc6abacecad75c55fc32b6", kill_on_drop: false }` [INFO] [stdout] fafd3e8edc7aadc56d0be3cfce1f9eda4dacc50643cc6abacecad75c55fc32b6