[INFO] fetching crate gxf2bed 0.2.7... [INFO] testing gxf2bed-0.2.7 against try#b6ae10aa7319b7ebb6c7b3331dd71a9d6c9c5b4b for pr-145330-1 [INFO] extracting crate gxf2bed 0.2.7 into /workspace/builds/worker-2-tc2/source [INFO] started tweaking crates.io crate gxf2bed 0.2.7 [INFO] finished tweaking crates.io crate gxf2bed 0.2.7 [INFO] tweaked toml for crates.io crate gxf2bed 0.2.7 written to /workspace/builds/worker-2-tc2/source/Cargo.toml [INFO] validating manifest of crates.io crate gxf2bed 0.2.7 on toolchain b6ae10aa7319b7ebb6c7b3331dd71a9d6c9c5b4b [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+b6ae10aa7319b7ebb6c7b3331dd71a9d6c9c5b4b" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] crate crates.io crate gxf2bed 0.2.7 already has a lockfile, it will not be regenerated [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+b6ae10aa7319b7ebb6c7b3331dd71a9d6c9c5b4b" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:e90291280db7d1fac5b66fc6dad9f9662629e7365a55743daf9bdf73ebc4ea79" "/opt/rustwide/cargo-home/bin/cargo" "+b6ae10aa7319b7ebb6c7b3331dd71a9d6c9c5b4b" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] b81588d7025f1a2bfc569f3d86685375c2e4e20ba9b64a44f252ba82a37532ad [INFO] running `Command { std: "docker" "start" "-a" "b81588d7025f1a2bfc569f3d86685375c2e4e20ba9b64a44f252ba82a37532ad", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "b81588d7025f1a2bfc569f3d86685375c2e4e20ba9b64a44f252ba82a37532ad", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "b81588d7025f1a2bfc569f3d86685375c2e4e20ba9b64a44f252ba82a37532ad", kill_on_drop: false }` [INFO] [stdout] b81588d7025f1a2bfc569f3d86685375c2e4e20ba9b64a44f252ba82a37532ad [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:e90291280db7d1fac5b66fc6dad9f9662629e7365a55743daf9bdf73ebc4ea79" "/opt/rustwide/cargo-home/bin/cargo" "+b6ae10aa7319b7ebb6c7b3331dd71a9d6c9c5b4b" "build" "--frozen" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] ff8909ed33981b74b8a92574e7e0afb15d81280c41ffdfb77d71ed19163485a2 [INFO] running `Command { std: "docker" "start" "-a" "ff8909ed33981b74b8a92574e7e0afb15d81280c41ffdfb77d71ed19163485a2", kill_on_drop: false }` [INFO] [stderr] Compiling proc-macro2 v1.0.86 [INFO] [stderr] Compiling unicode-ident v1.0.13 [INFO] [stderr] Compiling libc v0.2.159 [INFO] [stderr] Compiling anstyle v1.0.8 [INFO] [stderr] Compiling anstyle-parse v0.2.5 [INFO] [stderr] Compiling anstyle-query v1.1.1 [INFO] [stderr] Compiling colorchoice v1.0.2 [INFO] [stderr] Compiling time-macros v0.2.18 [INFO] [stderr] Compiling clap_lex v0.7.2 [INFO] [stderr] Compiling num_threads v0.1.7 [INFO] [stderr] Compiling thiserror v1.0.64 [INFO] [stderr] Compiling adler2 v2.0.0 [INFO] [stderr] Compiling colored v2.1.0 [INFO] [stderr] Compiling crc32fast v1.4.2 [INFO] [stderr] Compiling anstream v0.6.15 [INFO] [stderr] Compiling miniz_oxide v0.8.0 [INFO] [stderr] Compiling log v0.4.22 [INFO] [stderr] Compiling indoc v2.0.5 [INFO] [stderr] Compiling quote v1.0.37 [INFO] [stderr] Compiling clap_builder v4.5.18 [INFO] [stderr] Compiling syn v2.0.77 [INFO] [stderr] Compiling flate2 v1.0.33 [INFO] [stderr] Compiling num_cpus v1.16.0 [INFO] [stderr] Compiling time v0.3.36 [INFO] [stderr] Compiling simple_logger v4.3.3 [INFO] [stderr] Compiling thiserror-impl v1.0.64 [INFO] [stderr] Compiling clap_derive v4.5.18 [INFO] [stderr] Compiling clap v4.5.18 [INFO] [stderr] Compiling gxf2bed v0.2.7 (/opt/rustwide/workdir) [INFO] [stderr] Finished `dev` profile [unoptimized + debuginfo] target(s) in 25.20s [INFO] running `Command { std: "docker" "inspect" "ff8909ed33981b74b8a92574e7e0afb15d81280c41ffdfb77d71ed19163485a2", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "ff8909ed33981b74b8a92574e7e0afb15d81280c41ffdfb77d71ed19163485a2", kill_on_drop: false }` [INFO] [stdout] ff8909ed33981b74b8a92574e7e0afb15d81280c41ffdfb77d71ed19163485a2 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:e90291280db7d1fac5b66fc6dad9f9662629e7365a55743daf9bdf73ebc4ea79" "/opt/rustwide/cargo-home/bin/cargo" "+b6ae10aa7319b7ebb6c7b3331dd71a9d6c9c5b4b" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] 2a646a7efae279761b3a96a682e761614d17834f01020161ae7393d4e0857bb9 [INFO] running `Command { std: "docker" "start" "-a" "2a646a7efae279761b3a96a682e761614d17834f01020161ae7393d4e0857bb9", kill_on_drop: false }` [INFO] [stderr] Compiling gxf2bed v0.2.7 (/opt/rustwide/workdir) [INFO] [stderr] Finished `test` profile [unoptimized + debuginfo] target(s) in 1.70s [INFO] running `Command { std: "docker" "inspect" "2a646a7efae279761b3a96a682e761614d17834f01020161ae7393d4e0857bb9", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "2a646a7efae279761b3a96a682e761614d17834f01020161ae7393d4e0857bb9", kill_on_drop: false }` [INFO] [stdout] 2a646a7efae279761b3a96a682e761614d17834f01020161ae7393d4e0857bb9 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:e90291280db7d1fac5b66fc6dad9f9662629e7365a55743daf9bdf73ebc4ea79" "/opt/rustwide/cargo-home/bin/cargo" "+b6ae10aa7319b7ebb6c7b3331dd71a9d6c9c5b4b" "test" "--frozen", kill_on_drop: false }` [INFO] [stdout] 2a7e7d203a4f89d06757baa27a05af5a96fd2b0087f9c054c2ac59c4d6f9696d [INFO] running `Command { std: "docker" "start" "-a" "2a7e7d203a4f89d06757baa27a05af5a96fd2b0087f9c054c2ac59c4d6f9696d", kill_on_drop: false }` [INFO] [stderr] Finished `test` profile [unoptimized + debuginfo] target(s) in 0.08s [INFO] [stdout] [INFO] [stderr] Running unittests src/lib.rs (/opt/rustwide/target/debug/deps/gxf2bed-94a454a08195849e) [INFO] [stdout] running 12 tests [INFO] [stdout] test gxf::tests::test_empty_line ... ok [INFO] [stdout] test gxf::attr::tests::test_parse_gff ... ok [INFO] [stdout] test gxf::tests::test_empty_strand ... ok [INFO] [stdout] test gxf::tests::test_gene_pred ... ok [INFO] [stdout] test gxf::tests::test_record_gff ... ok [INFO] [stdout] test gxf::tests::test_record_gtf ... ok [INFO] [stdout] test utils::test::test_to_bed_cds_child ... ok [INFO] [stdout] test utils::test::test_to_bed_exon_child ... ok [INFO] [stdout] test utils::test::test_to_bed_five_utr_child ... ok [INFO] [stdout] test utils::test::test_to_bed_three_utr_child ... ok [INFO] [stdout] test utils::test::test_to_bed_stop_codon_coord ... ok [INFO] [stderr] Running unittests bench/bench.rs (/opt/rustwide/target/debug/deps/bench-9812a73a4baae1f4) [INFO] [stderr] Running unittests src/main.rs (/opt/rustwide/target/debug/deps/gxf2bed-ec426e29e8789dda) [INFO] [stderr] Doc-tests gxf2bed [INFO] [stdout] test gxf::attr::tests::test_parse_gtf ... ok [INFO] [stdout] [INFO] [stdout] test result: ok. 12 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.06s [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] running 0 tests [INFO] [stdout] [INFO] [stdout] test result: ok. 0 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.00s [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] running 0 tests [INFO] [stdout] [INFO] [stdout] test result: ok. 0 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.00s [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] running 22 tests [INFO] [stdout] test src/gxf.rs - gxf::GxfRecord<'a>::has_feature (line 509) ... ignored [INFO] [stdout] test src/gxf.rs - gxf::GxfRecord<'a>::parse (line 430) ... ignored [INFO] [stdout] test src/gxf.rs - gxf::GenePred::get_exons_info (line 371) ... FAILED [INFO] [stdout] test src/gxf.rs - gxf::GenePred::get_exon_starts_relative (line 335) ... FAILED [INFO] [stdout] test src/gxf.rs - gxf::GenePred::get_exon_sizes (line 293) ... FAILED [INFO] [stdout] test src/gxf.rs - gxf::Strand::fmt (line 55) ... FAILED [INFO] [stdout] test src/gxf/attr.rs - gxf::attr::extract_field (line 19) ... ignored [INFO] [stdout] test src/gxf.rs - gxf::GenePred::get_exon_count (line 271) ... FAILED [INFO] [stdout] test src/utils.rs - utils::convert (line 39) ... ignored [INFO] [stdout] test src/utils.rs - utils::initialize (line 460) ... ignored [INFO] [stdout] test src/utils.rs - utils::max_mem_usage_mb (line 263) ... ignored [INFO] [stdout] test src/utils.rs - utils::raw (line 187) ... ignored [INFO] [stdout] test src/utils.rs - utils::to_bed (line 103) ... ignored [INFO] [stdout] test src/utils.rs - utils::with_gz (line 222) ... ignored [INFO] [stdout] test src/utils.rs - utils::write_obj (line 305) ... ignored [INFO] [stdout] test src/gxf.rs - gxf::GenePred::merge (line 187) ... FAILED [INFO] [stdout] test src/gxf/attr.rs - gxf::attr::Attribute<'a>::feature (line 193) ... FAILED [INFO] [stdout] test src/gxf.rs - gxf::GenePred::get_exon_starts (line 313) ... FAILED [INFO] [stdout] test src/gxf.rs - gxf::GenePred::new (line 151) ... FAILED [INFO] [stdout] test src/gxf/attr.rs - gxf::attr::split_and_trim_bytes (line 78) ... FAILED [INFO] [stdout] test src/gxf/attr.rs - gxf::attr::Attribute<'a>::parse (line 136) ... FAILED [INFO] [stdout] test src/gxf.rs - gxf::Strand::from_str (line 85) ... FAILED [INFO] [stdout] [INFO] [stdout] failures: [INFO] [stdout] [INFO] [stdout] ---- src/gxf.rs - gxf::GenePred::get_exons_info (line 371) stdout ---- [INFO] [stdout] error[E0432]: unresolved imports `gxf2bed::GenePred`, `gxf2bed::Strand`, `gxf2bed::RecordType` [INFO] [stdout] --> src/gxf.rs:374:15 [INFO] [stdout] | [INFO] [stdout] 6 | use gxf2bed::{GenePred, Strand, RecordType}; [INFO] [stdout] | ^^^^^^^^ ^^^^^^ ^^^^^^^^^^ no `RecordType` in the root [INFO] [stdout] | | | [INFO] [stdout] | | no `Strand` in the root [INFO] [stdout] | no `GenePred` in the root [INFO] [stdout] | [INFO] [stdout] = help: consider importing this struct instead: [INFO] [stdout] gxf2bed::gxf::GenePred [INFO] [stdout] = help: consider importing this enum instead: [INFO] [stdout] gxf2bed::gxf::Strand [INFO] [stdout] = help: consider importing this enum instead: [INFO] [stdout] gxf2bed::gxf::RecordType [INFO] [stdout] [INFO] [stdout] error: aborting due to 1 previous error [INFO] [stdout] [INFO] [stdout] For more information about this error, try `rustc --explain E0432`. [INFO] [stdout] Couldn't compile the test. [INFO] [stdout] ---- src/gxf.rs - gxf::GenePred::get_exon_starts_relative (line 335) stdout ---- [INFO] [stdout] error[E0432]: unresolved imports `gxf2bed::GenePred`, `gxf2bed::Strand`, `gxf2bed::RecordType` [INFO] [stdout] --> src/gxf.rs:338:15 [INFO] [stdout] | [INFO] [stdout] 6 | use gxf2bed::{GenePred, Strand, RecordType}; [INFO] [stdout] | ^^^^^^^^ ^^^^^^ ^^^^^^^^^^ no `RecordType` in the root [INFO] [stdout] | | | [INFO] [stdout] | | no `Strand` in the root [INFO] [stdout] | no `GenePred` in the root [INFO] [stdout] | [INFO] [stdout] = help: consider importing this struct instead: [INFO] [stdout] gxf2bed::gxf::GenePred [INFO] [stdout] = help: consider importing this enum instead: [INFO] [stdout] gxf2bed::gxf::Strand [INFO] [stdout] = help: consider importing this enum instead: [INFO] [stdout] gxf2bed::gxf::RecordType [INFO] [stdout] [INFO] [stdout] error: aborting due to 1 previous error [INFO] [stdout] [INFO] [stdout] For more information about this error, try `rustc --explain E0432`. [INFO] [stdout] Couldn't compile the test. [INFO] [stdout] ---- src/gxf.rs - gxf::GenePred::get_exon_sizes (line 293) stdout ---- [INFO] [stdout] error[E0432]: unresolved imports `gxf2bed::GenePred`, `gxf2bed::Strand`, `gxf2bed::RecordType` [INFO] [stdout] --> src/gxf.rs:296:15 [INFO] [stdout] | [INFO] [stdout] 6 | use gxf2bed::{GenePred, Strand, RecordType}; // [INFO] [stdout] | ^^^^^^^^ ^^^^^^ ^^^^^^^^^^ no `RecordType` in the root [INFO] [stdout] | | | [INFO] [stdout] | | no `Strand` in the root [INFO] [stdout] | no `GenePred` in the root [INFO] [stdout] | [INFO] [stdout] = help: consider importing this struct instead: [INFO] [stdout] gxf2bed::gxf::GenePred [INFO] [stdout] = help: consider importing this enum instead: [INFO] [stdout] gxf2bed::gxf::Strand [INFO] [stdout] = help: consider importing this enum instead: [INFO] [stdout] gxf2bed::gxf::RecordType [INFO] [stdout] [INFO] [stdout] error: aborting due to 1 previous error [INFO] [stdout] [INFO] [stdout] For more information about this error, try `rustc --explain E0432`. [INFO] [stdout] Couldn't compile the test. [INFO] [stdout] ---- src/gxf.rs - gxf::Strand::fmt (line 55) stdout ---- [INFO] [stdout] error[E0432]: unresolved import `gxf2bed::Strand` [INFO] [stdout] --> src/gxf.rs:57:5 [INFO] [stdout] | [INFO] [stdout] 5 | use gxf2bed::Strand; // with the actual crate name [INFO] [stdout] | ^^^^^^^^^^^^^^^ no `Strand` in the root [INFO] [stdout] | [INFO] [stdout] help: consider importing this enum instead [INFO] [stdout] | [INFO] [stdout] 5 | use gxf2bed::gxf::Strand; // with the actual crate name [INFO] [stdout] | +++++ [INFO] [stdout] [INFO] [stdout] error: aborting due to 1 previous error [INFO] [stdout] [INFO] [stdout] For more information about this error, try `rustc --explain E0432`. [INFO] [stdout] Couldn't compile the test. [INFO] [stdout] ---- src/gxf.rs - gxf::GenePred::get_exon_count (line 271) stdout ---- [INFO] [stdout] error[E0432]: unresolved imports `gxf2bed::GenePred`, `gxf2bed::Strand`, `gxf2bed::RecordType` [INFO] [stdout] --> src/gxf.rs:274:15 [INFO] [stdout] | [INFO] [stdout] 6 | use gxf2bed::{GenePred, Strand, RecordType}; // [INFO] [stdout] | ^^^^^^^^ ^^^^^^ ^^^^^^^^^^ no `RecordType` in the root [INFO] [stdout] | | | [INFO] [stdout] | | no `Strand` in the root [INFO] [stdout] | no `GenePred` in the root [INFO] [stdout] | [INFO] [stdout] = help: consider importing this struct instead: [INFO] [stdout] gxf2bed::gxf::GenePred [INFO] [stdout] = help: consider importing this enum instead: [INFO] [stdout] gxf2bed::gxf::Strand [INFO] [stdout] = help: consider importing this enum instead: [INFO] [stdout] gxf2bed::gxf::RecordType [INFO] [stdout] [INFO] [stdout] error: aborting due to 1 previous error [INFO] [stdout] [INFO] [stdout] For more information about this error, try `rustc --explain E0432`. [INFO] [stdout] Couldn't compile the test. [INFO] [stdout] ---- src/gxf.rs - gxf::GenePred::merge (line 187) stdout ---- [INFO] [stdout] error[E0432]: unresolved imports `gxf2bed::GenePred`, `gxf2bed::Strand`, `gxf2bed::RecordType` [INFO] [stdout] --> src/gxf.rs:190:15 [INFO] [stdout] | [INFO] [stdout] 6 | use gxf2bed::{GenePred, Strand, RecordType}; // [INFO] [stdout] | ^^^^^^^^ ^^^^^^ ^^^^^^^^^^ no `RecordType` in the root [INFO] [stdout] | | | [INFO] [stdout] | | no `Strand` in the root [INFO] [stdout] | no `GenePred` in the root [INFO] [stdout] | [INFO] [stdout] = help: consider importing this struct instead: [INFO] [stdout] gxf2bed::gxf::GenePred [INFO] [stdout] = help: consider importing this enum instead: [INFO] [stdout] gxf2bed::gxf::Strand [INFO] [stdout] = help: consider importing this enum instead: [INFO] [stdout] gxf2bed::gxf::RecordType [INFO] [stdout] [INFO] [stdout] error: aborting due to 1 previous error [INFO] [stdout] [INFO] [stdout] For more information about this error, try `rustc --explain E0432`. [INFO] [stdout] Couldn't compile the test. [INFO] [stdout] ---- src/gxf/attr.rs - gxf::attr::Attribute<'a>::feature (line 193) stdout ---- [INFO] [stdout] error[E0432]: unresolved import `gxf2bed::Attribute` [INFO] [stdout] --> src/gxf/attr.rs:195:5 [INFO] [stdout] | [INFO] [stdout] 5 | use gxf2bed::Attribute; // [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^ no `Attribute` in the root [INFO] [stdout] | [INFO] [stdout] help: consider importing this struct instead [INFO] [stdout] | [INFO] [stdout] 5 | use gxf2bed::gxf::Attribute; // [INFO] [stdout] | +++++ [INFO] [stdout] [INFO] [stdout] error: aborting due to 1 previous error [INFO] [stdout] [INFO] [stdout] For more information about this error, try `rustc --explain E0432`. [INFO] [stdout] Couldn't compile the test. [INFO] [stdout] ---- src/gxf.rs - gxf::GenePred::get_exon_starts (line 313) stdout ---- [INFO] [stdout] error[E0432]: unresolved imports `gxf2bed::GenePred`, `gxf2bed::Strand`, `gxf2bed::RecordType` [INFO] [stdout] --> src/gxf.rs:316:15 [INFO] [stdout] | [INFO] [stdout] 6 | use gxf2bed::{GenePred, Strand, RecordType}; // [INFO] [stdout] | ^^^^^^^^ ^^^^^^ ^^^^^^^^^^ no `RecordType` in the root [INFO] [stdout] | | | [INFO] [stdout] | | no `Strand` in the root [INFO] [stdout] | no `GenePred` in the root [INFO] [stdout] | [INFO] [stdout] = help: consider importing this struct instead: [INFO] [stdout] gxf2bed::gxf::GenePred [INFO] [stdout] = help: consider importing this enum instead: [INFO] [stdout] gxf2bed::gxf::Strand [INFO] [stdout] = help: consider importing this enum instead: [INFO] [stdout] gxf2bed::gxf::RecordType [INFO] [stdout] [INFO] [stdout] error: aborting due to 1 previous error [INFO] [stdout] [INFO] [stdout] For more information about this error, try `rustc --explain E0432`. [INFO] [stdout] Couldn't compile the test. [INFO] [stdout] ---- src/gxf.rs - gxf::GenePred::new (line 151) stdout ---- [INFO] [stdout] error[E0432]: unresolved imports `gxf2bed::GenePred`, `gxf2bed::Strand`, `gxf2bed::RecordType` [INFO] [stdout] --> src/gxf.rs:153:15 [INFO] [stdout] | [INFO] [stdout] 5 | use gxf2bed::{GenePred, Strand, RecordType}; // [INFO] [stdout] | ^^^^^^^^ ^^^^^^ ^^^^^^^^^^ no `RecordType` in the root [INFO] [stdout] | | | [INFO] [stdout] | | no `Strand` in the root [INFO] [stdout] | no `GenePred` in the root [INFO] [stdout] | [INFO] [stdout] = help: consider importing this struct instead: [INFO] [stdout] gxf2bed::gxf::GenePred [INFO] [stdout] = help: consider importing this enum instead: [INFO] [stdout] gxf2bed::gxf::Strand [INFO] [stdout] = help: consider importing this enum instead: [INFO] [stdout] gxf2bed::gxf::RecordType [INFO] [stdout] [INFO] [stdout] error: aborting due to 1 previous error [INFO] [stdout] [INFO] [stdout] For more information about this error, try `rustc --explain E0432`. [INFO] [stdout] Couldn't compile the test. [INFO] [stdout] ---- src/gxf/attr.rs - gxf::attr::split_and_trim_bytes (line 78) stdout ---- [INFO] [stdout] error[E0432]: unresolved import `gxf2bed::split_and_trim_bytes` [INFO] [stdout] --> src/gxf/attr.rs:80:5 [INFO] [stdout] | [INFO] [stdout] 5 | use gxf2bed::split_and_trim_bytes; // [INFO] [stdout] | ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ no `split_and_trim_bytes` in the root [INFO] [stdout] [INFO] [stdout] error: aborting due to 1 previous error [INFO] [stdout] [INFO] [stdout] For more information about this error, try `rustc --explain E0432`. [INFO] [stdout] Couldn't compile the test. [INFO] [stdout] ---- src/gxf/attr.rs - gxf::attr::Attribute<'a>::parse (line 136) stdout ---- [INFO] [stdout] error[E0432]: unresolved imports `gxf2bed::Attribute`, `gxf2bed::ParseError` [INFO] [stdout] --> src/gxf/attr.rs:138:15 [INFO] [stdout] | [INFO] [stdout] 5 | use gxf2bed::{Attribute, ParseError}; // [INFO] [stdout] | ^^^^^^^^^ ^^^^^^^^^^ no `ParseError` in the root [INFO] [stdout] | | [INFO] [stdout] | no `Attribute` in the root [INFO] [stdout] | [INFO] [stdout] = help: consider importing this struct instead: [INFO] [stdout] gxf2bed::gxf::Attribute [INFO] [stdout] = help: consider importing one of these items instead: [INFO] [stdout] std::string::ParseError [INFO] [stdout] gxf2bed::gxf::ParseError [INFO] [stdout] [INFO] [stdout] error: aborting due to 1 previous error [INFO] [stdout] [INFO] [stdout] For more information about this error, try `rustc --explain E0432`. [INFO] [stdout] Couldn't compile the test. [INFO] [stdout] ---- src/gxf.rs - gxf::Strand::from_str (line 85) stdout ---- [INFO] [stdout] error[E0432]: unresolved import `gxf2bed::Strand` [INFO] [stdout] --> src/gxf.rs:88:5 [INFO] [stdout] | [INFO] [stdout] 6 | use gxf2bed::Strand; // with the actual crate name [INFO] [stdout] | ^^^^^^^^^^^^^^^ no `Strand` in the root [INFO] [stdout] | [INFO] [stdout] help: consider importing this enum instead [INFO] [stdout] | [INFO] [stdout] 6 | use gxf2bed::gxf::Strand; // with the actual crate name [INFO] [stdout] | +++++ [INFO] [stdout] [INFO] [stdout] error: aborting due to 1 previous error [INFO] [stdout] [INFO] [stdout] For more information about this error, try `rustc --explain E0432`. [INFO] [stdout] Couldn't compile the test. [INFO] [stdout] [INFO] [stdout] failures: [INFO] [stdout] src/gxf.rs - gxf::GenePred::get_exon_count (line 271) [INFO] [stdout] src/gxf.rs - gxf::GenePred::get_exon_sizes (line 293) [INFO] [stdout] src/gxf.rs - gxf::GenePred::get_exon_starts (line 313) [INFO] [stdout] src/gxf.rs - gxf::GenePred::get_exon_starts_relative (line 335) [INFO] [stdout] src/gxf.rs - gxf::GenePred::get_exons_info (line 371) [INFO] [stdout] src/gxf.rs - gxf::GenePred::merge (line 187) [INFO] [stdout] src/gxf.rs - gxf::GenePred::new (line 151) [INFO] [stdout] src/gxf.rs - gxf::Strand::fmt (line 55) [INFO] [stdout] src/gxf.rs - gxf::Strand::from_str (line 85) [INFO] [stdout] src/gxf/attr.rs - gxf::attr::Attribute<'a>::feature (line 193) [INFO] [stdout] src/gxf/attr.rs - gxf::attr::Attribute<'a>::parse (line 136) [INFO] [stdout] src/gxf/attr.rs - gxf::attr::split_and_trim_bytes (line 78) [INFO] [stdout] [INFO] [stdout] test result: FAILED. 0 passed; 12 failed; 10 ignored; 0 measured; 0 filtered out; finished in 0.77s [INFO] [stdout] [INFO] [stderr] error: doctest failed, to rerun pass `--doc` [INFO] running `Command { std: "docker" "inspect" "2a7e7d203a4f89d06757baa27a05af5a96fd2b0087f9c054c2ac59c4d6f9696d", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "2a7e7d203a4f89d06757baa27a05af5a96fd2b0087f9c054c2ac59c4d6f9696d", kill_on_drop: false }` [INFO] [stdout] 2a7e7d203a4f89d06757baa27a05af5a96fd2b0087f9c054c2ac59c4d6f9696d