[INFO] fetching crate thaf 0.0.3...
[INFO] testing thaf-0.0.3 against master#350d0ef0ec0493e6d21cfb265cb8211a0e74d766 for pr-145330-1
[INFO] extracting crate thaf 0.0.3 into /workspace/builds/worker-2-tc1/source
[INFO] started tweaking crates.io crate thaf 0.0.3
[INFO] removed 0 missing tests
[INFO] finished tweaking crates.io crate thaf 0.0.3
[INFO] tweaked toml for crates.io crate thaf 0.0.3 written to /workspace/builds/worker-2-tc1/source/Cargo.toml
[INFO] validating manifest of crates.io crate thaf 0.0.3 on toolchain 350d0ef0ec0493e6d21cfb265cb8211a0e74d766
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+350d0ef0ec0493e6d21cfb265cb8211a0e74d766" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] crate crates.io crate thaf 0.0.3 already has a lockfile, it will not be regenerated
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+350d0ef0ec0493e6d21cfb265cb8211a0e74d766" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] [stderr]     Updating crates.io index
[INFO] [stderr]  Downloading crates ...
[INFO] [stderr]   Downloaded multimap v0.10.1
[INFO] [stderr]   Downloaded ordered-float v5.0.0
[INFO] [stderr]   Downloaded newtype_derive v0.1.6
[INFO] [stderr]   Downloaded itertools-num v0.1.3
[INFO] [stderr]   Downloaded bio-types v1.0.4
[INFO] [stderr]   Downloaded bytecount v0.6.9
[INFO] [stderr]   Downloaded triple_accel v0.4.0
[INFO] [stderr]   Downloaded simba v0.9.0
[INFO] [stderr]   Downloaded custom_derive v0.1.7
[INFO] [stderr]   Downloaded statrs v0.18.0
[INFO] [stderr]   Downloaded editdistancek v1.0.2
[INFO] [stderr]   Downloaded wide v0.7.33
[INFO] [stderr]   Downloaded enum-map v2.7.3
[INFO] [stderr]   Downloaded enum-map-derive v0.17.0
[INFO] [stderr]   Downloaded bio v2.3.0
[INFO] [stderr]   Downloaded nalgebra v0.33.2
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:e90291280db7d1fac5b66fc6dad9f9662629e7365a55743daf9bdf73ebc4ea79" "/opt/rustwide/cargo-home/bin/cargo" "+350d0ef0ec0493e6d21cfb265cb8211a0e74d766" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] [stdout] e584d6ef757647f59530744cc6036febd68265214a568f39abe2ef34626d3995
[INFO] running `Command { std: "docker" "start" "-a" "e584d6ef757647f59530744cc6036febd68265214a568f39abe2ef34626d3995", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "e584d6ef757647f59530744cc6036febd68265214a568f39abe2ef34626d3995", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "e584d6ef757647f59530744cc6036febd68265214a568f39abe2ef34626d3995", kill_on_drop: false }`
[INFO] [stdout] e584d6ef757647f59530744cc6036febd68265214a568f39abe2ef34626d3995
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:e90291280db7d1fac5b66fc6dad9f9662629e7365a55743daf9bdf73ebc4ea79" "/opt/rustwide/cargo-home/bin/cargo" "+350d0ef0ec0493e6d21cfb265cb8211a0e74d766" "build" "--frozen" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] 6bbe919c7dbdf4ed854ac9cd8f67421f3f96f09be063d9e8e1024ab541bde9d1
[INFO] running `Command { std: "docker" "start" "-a" "6bbe919c7dbdf4ed854ac9cd8f67421f3f96f09be063d9e8e1024ab541bde9d1", kill_on_drop: false }`
[INFO] [stderr]    Compiling libm v0.2.15
[INFO] [stderr]    Compiling libc v0.2.174
[INFO] [stderr]    Compiling proc-macro2 v1.0.95
[INFO] [stderr]    Compiling num-traits v0.2.19
[INFO] [stderr]    Compiling matrixmultiply v0.3.10
[INFO] [stderr]    Compiling bytemuck v1.23.1
[INFO] [stderr]    Compiling semver v0.1.20
[INFO] [stderr]    Compiling rawpointer v0.2.1
[INFO] [stderr]    Compiling feature-probe v0.1.1
[INFO] [stderr]    Compiling rustc_version v0.1.7
[INFO] [stderr]    Compiling foldhash v0.1.5
[INFO] [stderr]    Compiling bv v0.11.1
[INFO] [stderr]    Compiling newtype_derive v0.1.6
[INFO] [stderr]    Compiling safe_arch v0.7.4
[INFO] [stderr]    Compiling regex v1.11.1
[INFO] [stderr]    Compiling hashbrown v0.15.4
[INFO] [stderr]    Compiling csv-core v0.1.12
[INFO] [stderr]    Compiling quote v1.0.40
[INFO] [stderr]    Compiling wide v0.7.33
[INFO] [stderr]    Compiling bit-vec v0.8.0
[INFO] [stderr]    Compiling fixedbitset v0.5.7
[INFO] [stderr]    Compiling syn v2.0.104
[INFO] [stderr]    Compiling clap_builder v4.5.41
[INFO] [stderr]    Compiling getrandom v0.2.16
[INFO] [stderr]    Compiling indexmap v2.10.0
[INFO] [stderr]    Compiling bit-set v0.8.0
[INFO] [stderr]    Compiling rand_core v0.6.4
[INFO] [stderr]    Compiling fxhash v0.2.1
[INFO] [stderr]    Compiling rand_chacha v0.3.1
[INFO] [stderr]    Compiling bytecount v0.6.9
[INFO] [stderr]    Compiling triple_accel v0.4.0
[INFO] [stderr]    Compiling strum v0.26.3
[INFO] [stderr]    Compiling rand v0.8.5
[INFO] [stderr]    Compiling petgraph v0.8.2
[INFO] [stderr]    Compiling num-complex v0.4.6
[INFO] [stderr]    Compiling num-integer v0.1.46
[INFO] [stderr]    Compiling approx v0.5.1
[INFO] [stderr]    Compiling num-rational v0.4.2
[INFO] [stderr]    Compiling rand_distr v0.4.3
[INFO] [stderr]    Compiling simba v0.9.0
[INFO] [stderr]    Compiling ndarray v0.16.1
[INFO] [stderr]    Compiling itertools-num v0.1.3
[INFO] [stderr]    Compiling ordered-float v5.0.0
[INFO] [stderr]    Compiling custom_derive v0.1.7
[INFO] [stderr]    Compiling editdistancek v1.0.2
[INFO] [stderr]    Compiling serde_derive v1.0.219
[INFO] [stderr]    Compiling thiserror-impl v1.0.69
[INFO] [stderr]    Compiling thiserror-impl v2.0.12
[INFO] [stderr]    Compiling derive-new v0.6.0
[INFO] [stderr]    Compiling enum-map-derive v0.17.0
[INFO] [stderr]    Compiling strum_macros v0.26.4
[INFO] [stderr]    Compiling enum-map v2.7.3
[INFO] [stderr]    Compiling clap_derive v4.5.41
[INFO] [stderr]    Compiling thiserror v2.0.12
[INFO] [stderr]    Compiling thiserror v1.0.69
[INFO] [stderr]    Compiling serde v1.0.219
[INFO] [stderr]    Compiling bio-types v1.0.4
[INFO] [stderr]    Compiling clap v4.5.41
[INFO] [stderr]    Compiling nalgebra v0.33.2
[INFO] [stderr]    Compiling csv v1.3.1
[INFO] [stderr]    Compiling multimap v0.10.1
[INFO] [stderr]    Compiling vec_map v0.8.2
[INFO] [stderr]    Compiling statrs v0.18.0
[INFO] [stderr]    Compiling bio v2.3.0
[INFO] [stderr]    Compiling thaf v0.0.3 (/opt/rustwide/workdir)
[INFO] [stderr]     Finished `dev` profile [unoptimized + debuginfo] target(s) in 1m 06s
[INFO] running `Command { std: "docker" "inspect" "6bbe919c7dbdf4ed854ac9cd8f67421f3f96f09be063d9e8e1024ab541bde9d1", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "6bbe919c7dbdf4ed854ac9cd8f67421f3f96f09be063d9e8e1024ab541bde9d1", kill_on_drop: false }`
[INFO] [stdout] 6bbe919c7dbdf4ed854ac9cd8f67421f3f96f09be063d9e8e1024ab541bde9d1
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:e90291280db7d1fac5b66fc6dad9f9662629e7365a55743daf9bdf73ebc4ea79" "/opt/rustwide/cargo-home/bin/cargo" "+350d0ef0ec0493e6d21cfb265cb8211a0e74d766" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] 42ea74ec3a47813d2616a82be6b8c3a9916b10ae70257f583f8d05c02c29454c
[INFO] running `Command { std: "docker" "start" "-a" "42ea74ec3a47813d2616a82be6b8c3a9916b10ae70257f583f8d05c02c29454c", kill_on_drop: false }`
[INFO] [stderr]    Compiling rustix v1.0.7
[INFO] [stderr]    Compiling getrandom v0.3.3
[INFO] [stderr]    Compiling tempfile v3.20.0
[INFO] [stderr]    Compiling thaf v0.0.3 (/opt/rustwide/workdir)
[INFO] [stderr]     Finished `test` profile [unoptimized + debuginfo] target(s) in 6.28s
[INFO] running `Command { std: "docker" "inspect" "42ea74ec3a47813d2616a82be6b8c3a9916b10ae70257f583f8d05c02c29454c", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "42ea74ec3a47813d2616a82be6b8c3a9916b10ae70257f583f8d05c02c29454c", kill_on_drop: false }`
[INFO] [stdout] 42ea74ec3a47813d2616a82be6b8c3a9916b10ae70257f583f8d05c02c29454c
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:e90291280db7d1fac5b66fc6dad9f9662629e7365a55743daf9bdf73ebc4ea79" "/opt/rustwide/cargo-home/bin/cargo" "+350d0ef0ec0493e6d21cfb265cb8211a0e74d766" "test" "--frozen", kill_on_drop: false }`
[INFO] [stdout] a3f2a9c2eab597795e38183f17e58a8592c77194fa4d20ee1395764e2b43abd1
[INFO] running `Command { std: "docker" "start" "-a" "a3f2a9c2eab597795e38183f17e58a8592c77194fa4d20ee1395764e2b43abd1", kill_on_drop: false }`
[INFO] [stderr]     Finished `test` profile [unoptimized + debuginfo] target(s) in 0.14s
[INFO] [stderr]      Running unittests src/lib.rs (/opt/rustwide/target/debug/deps/thaf-4c38b15af0b61b56)
[INFO] [stdout] 
[INFO] [stdout] running 8 tests
[INFO] [stdout] test gff3::tests::test_parse_gff3_to_regions_simple ... ok
[INFO] [stdout] test transcript_builder::tests::test_build_transcripts_from_regions ... ok
[INFO] [stdout] test transcript_builder::tests::test_extract_transcript_sequence_plus ... ok
[INFO] [stdout] test transcript_builder::tests::test_extract_transcript_sequence_minus ... ok
[INFO] [stdout] test gff3::tests::test_parse_attributes_basic ... ok
[INFO] [stdout] test transcript_builder::tests::test_transcript_sort_minus ... ok
[INFO] [stdout] test transcript_builder::tests::test_transcript_sort_plus ... ok
[INFO] [stdout] test transcript_builder::tests::test_transcript_overlap_panic - should panic ... ok
[INFO] [stdout] 
[INFO] [stdout] test result: ok. 8 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.17s
[INFO] [stdout] 
[INFO] [stderr]      Running unittests src/main.rs (/opt/rustwide/target/debug/deps/thaf-2d2146211aa94754)
[INFO] [stdout] 
[INFO] [stdout] running 8 tests
[INFO] [stdout] test gff3::tests::test_parse_attributes_basic ... ok
[INFO] [stdout] test transcript_builder::tests::test_build_transcripts_from_regions ... ok
[INFO] [stdout] test transcript_builder::tests::test_extract_transcript_sequence_minus ... ok
[INFO] [stdout] test transcript_builder::tests::test_extract_transcript_sequence_plus ... ok
[INFO] [stdout] test transcript_builder::tests::test_transcript_sort_minus ... ok
[INFO] [stdout] test transcript_builder::tests::test_transcript_sort_plus ... ok
[INFO] [stdout] test gff3::tests::test_parse_gff3_to_regions_simple ... ok
[INFO] [stdout] test transcript_builder::tests::test_transcript_overlap_panic - should panic ... ok
[INFO] [stdout] 
[INFO] [stdout] test result: ok. 8 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.07s
[INFO] [stdout] 
[INFO] [stderr]      Running tests/minitest.rs (/opt/rustwide/target/debug/deps/minitest-3131c3e34623ede0)
[INFO] [stderr]    Doc-tests thaf
[INFO] [stdout] 
[INFO] [stdout] running 1 test
[INFO] [stdout] test minimal_transcript_extraction ... ok
[INFO] [stdout] 
[INFO] [stdout] test result: ok. 1 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.00s
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] running 0 tests
[INFO] [stdout] 
[INFO] [stdout] test result: ok. 0 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.00s
[INFO] [stdout] 
[INFO] running `Command { std: "docker" "inspect" "a3f2a9c2eab597795e38183f17e58a8592c77194fa4d20ee1395764e2b43abd1", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "a3f2a9c2eab597795e38183f17e58a8592c77194fa4d20ee1395764e2b43abd1", kill_on_drop: false }`
[INFO] [stdout] a3f2a9c2eab597795e38183f17e58a8592c77194fa4d20ee1395764e2b43abd1