[INFO] fetching crate sketchlib 0.2.4... [INFO] testing sketchlib-0.2.4 against master#350d0ef0ec0493e6d21cfb265cb8211a0e74d766 for pr-145330-1 [INFO] extracting crate sketchlib 0.2.4 into /workspace/builds/worker-7-tc1/source [INFO] started tweaking crates.io crate sketchlib 0.2.4 [INFO] removed 0 missing tests [INFO] finished tweaking crates.io crate sketchlib 0.2.4 [INFO] tweaked toml for crates.io crate sketchlib 0.2.4 written to /workspace/builds/worker-7-tc1/source/Cargo.toml [INFO] validating manifest of crates.io crate sketchlib 0.2.4 on toolchain 350d0ef0ec0493e6d21cfb265cb8211a0e74d766 [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+350d0ef0ec0493e6d21cfb265cb8211a0e74d766" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] crate crates.io crate sketchlib 0.2.4 already has a lockfile, it will not be regenerated [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+350d0ef0ec0493e6d21cfb265cb8211a0e74d766" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] [stderr] Updating crates.io index [INFO] [stderr] Downloading crates ... [INFO] [stderr] Downloaded pyo3-build-config v0.21.2 [INFO] [stderr] Downloaded pyo3-macros v0.21.2 [INFO] [stderr] Downloaded snapbox-macros v0.3.10 [INFO] [stderr] Downloaded simple_logger v4.3.3 [INFO] [stderr] Downloaded pyo3-build-config v0.22.6 [INFO] [stderr] Downloaded needletail v0.5.1 [INFO] [stderr] Downloaded pyo3-macros-backend v0.21.2 [INFO] [stderr] Downloaded pyo3-ffi v0.21.2 [INFO] [stderr] Downloaded snapbox v0.6.21 [INFO] [stderr] Downloaded syn v2.0.105 [INFO] [stderr] Downloaded pyo3 v0.21.2 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-7-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-7-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:e90291280db7d1fac5b66fc6dad9f9662629e7365a55743daf9bdf73ebc4ea79" "/opt/rustwide/cargo-home/bin/cargo" "+350d0ef0ec0493e6d21cfb265cb8211a0e74d766" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] 3d990e677686939d4d7cb834dfd641d57ea683fb31a82ce4f2f518eda280b503 [INFO] running `Command { std: "docker" "start" "-a" "3d990e677686939d4d7cb834dfd641d57ea683fb31a82ce4f2f518eda280b503", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "3d990e677686939d4d7cb834dfd641d57ea683fb31a82ce4f2f518eda280b503", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "3d990e677686939d4d7cb834dfd641d57ea683fb31a82ce4f2f518eda280b503", kill_on_drop: false }` [INFO] [stdout] 3d990e677686939d4d7cb834dfd641d57ea683fb31a82ce4f2f518eda280b503 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-7-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-7-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:e90291280db7d1fac5b66fc6dad9f9662629e7365a55743daf9bdf73ebc4ea79" "/opt/rustwide/cargo-home/bin/cargo" "+350d0ef0ec0493e6d21cfb265cb8211a0e74d766" "build" "--frozen" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] fbbb0cfd237dc75c873ce3719f702be4d45102610264e1eaff0c07ec3b08b1b1 [INFO] running `Command { std: "docker" "start" "-a" "fbbb0cfd237dc75c873ce3719f702be4d45102610264e1eaff0c07ec3b08b1b1", kill_on_drop: false }` [INFO] [stderr] Compiling proc-macro2 v1.0.97 [INFO] [stderr] Compiling rayon-core v1.13.0 [INFO] [stderr] Compiling cc v1.2.32 [INFO] [stderr] Compiling zlib-rs v0.5.1 [INFO] [stderr] Compiling either v1.15.0 [INFO] [stderr] Compiling time-macros v0.2.22 [INFO] [stderr] Compiling getrandom v0.3.3 [INFO] [stderr] Compiling snap v1.1.1 [INFO] [stderr] Compiling num_threads v0.1.7 [INFO] [stderr] Compiling colored v2.2.0 [INFO] [stderr] Compiling console v0.15.11 [INFO] [stderr] Compiling clap_builder v4.5.44 [INFO] [stderr] Compiling regex-automata v0.4.9 [INFO] [stderr] Compiling rmp v0.8.14 [INFO] [stderr] Compiling number_prefix v0.4.0 [INFO] [stderr] Compiling bytecount v0.6.9 [INFO] [stderr] Compiling ahash v0.8.12 [INFO] [stderr] Compiling memmap2 v0.9.7 [INFO] [stderr] Compiling num_cpus v1.17.0 [INFO] [stderr] Compiling rayon v1.11.0 [INFO] [stderr] Compiling quote v1.0.40 [INFO] [stderr] Compiling time v0.3.41 [INFO] [stderr] Compiling lzma-sys v0.1.20 [INFO] [stderr] Compiling bzip2-sys v0.1.13+1.0.8 [INFO] [stderr] Compiling syn v2.0.105 [INFO] [stderr] Compiling xz2 v0.1.7 [INFO] [stderr] Compiling bzip2 v0.4.4 [INFO] [stderr] Compiling simple_logger v4.3.3 [INFO] [stderr] Compiling regex v1.11.1 [INFO] [stderr] Compiling indicatif v0.17.11 [INFO] [stderr] Compiling libz-rs-sys v0.5.1 [INFO] [stderr] Compiling flate2 v1.1.2 [INFO] [stderr] Compiling serde_derive v1.0.219 [INFO] [stderr] Compiling clap_derive v4.5.45 [INFO] [stderr] Compiling needletail v0.5.1 [INFO] [stderr] Compiling clap v4.5.45 [INFO] [stderr] Compiling serde v1.0.219 [INFO] [stderr] Compiling rmp-serde v1.3.0 [INFO] [stderr] Compiling ciborium v0.2.2 [INFO] [stderr] Compiling roaring v0.10.12 [INFO] [stderr] Compiling hashbrown v0.14.5 [INFO] [stderr] Compiling sketchlib v0.2.4 (/opt/rustwide/workdir) [INFO] [stderr] Finished `dev` profile [unoptimized + debuginfo] target(s) in 28.06s [INFO] running `Command { std: "docker" "inspect" "fbbb0cfd237dc75c873ce3719f702be4d45102610264e1eaff0c07ec3b08b1b1", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "fbbb0cfd237dc75c873ce3719f702be4d45102610264e1eaff0c07ec3b08b1b1", kill_on_drop: false }` [INFO] [stdout] fbbb0cfd237dc75c873ce3719f702be4d45102610264e1eaff0c07ec3b08b1b1 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-7-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-7-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:e90291280db7d1fac5b66fc6dad9f9662629e7365a55743daf9bdf73ebc4ea79" "/opt/rustwide/cargo-home/bin/cargo" "+350d0ef0ec0493e6d21cfb265cb8211a0e74d766" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] 1f61b6c57da4562b49e615a399b99a4df09fa99244d6322c29b21fd5754acc4b [INFO] running `Command { std: "docker" "start" "-a" "1f61b6c57da4562b49e615a399b99a4df09fa99244d6322c29b21fd5754acc4b", kill_on_drop: false }` [INFO] [stderr] Compiling aho-corasick v1.1.3 [INFO] [stderr] Compiling bstr v1.12.0 [INFO] [stderr] Compiling rustix v1.0.8 [INFO] [stderr] Compiling rayon v1.11.0 [INFO] [stderr] Compiling predicates v3.1.3 [INFO] [stderr] Compiling float-cmp v0.9.0 [INFO] [stderr] Compiling snapbox-macros v0.3.10 [INFO] [stderr] Compiling similar v2.7.0 [INFO] [stderr] Compiling approx v0.5.1 [INFO] [stderr] Compiling snapbox v0.6.21 [INFO] [stderr] Compiling regex-automata v0.4.9 [INFO] [stderr] Compiling tempfile v3.20.0 [INFO] [stderr] Compiling hashbrown v0.14.5 [INFO] [stderr] Compiling indicatif v0.17.11 [INFO] [stderr] Compiling globset v0.4.16 [INFO] [stderr] Compiling regex v1.11.1 [INFO] [stderr] Compiling ignore v0.4.23 [INFO] [stderr] Compiling predicates v2.1.5 [INFO] [stderr] Compiling sketchlib v0.2.4 (/opt/rustwide/workdir) [INFO] [stderr] Compiling globwalk v0.9.1 [INFO] [stderr] Compiling assert_fs v1.1.3 [INFO] [stderr] Finished `test` profile [unoptimized + debuginfo] target(s) in 22.19s [INFO] running `Command { std: "docker" "inspect" "1f61b6c57da4562b49e615a399b99a4df09fa99244d6322c29b21fd5754acc4b", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "1f61b6c57da4562b49e615a399b99a4df09fa99244d6322c29b21fd5754acc4b", kill_on_drop: false }` [INFO] [stdout] 1f61b6c57da4562b49e615a399b99a4df09fa99244d6322c29b21fd5754acc4b [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-7-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-7-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:e90291280db7d1fac5b66fc6dad9f9662629e7365a55743daf9bdf73ebc4ea79" "/opt/rustwide/cargo-home/bin/cargo" "+350d0ef0ec0493e6d21cfb265cb8211a0e74d766" "test" "--frozen", kill_on_drop: false }` [INFO] [stdout] 34f9a88085456393134d4890bc2c5a58d059d8d5988804d7935028bdfcc1b976 [INFO] running `Command { std: "docker" "start" "-a" "34f9a88085456393134d4890bc2c5a58d059d8d5988804d7935028bdfcc1b976", kill_on_drop: false }` [INFO] [stderr] Finished `test` profile [unoptimized + debuginfo] target(s) in 0.27s [INFO] [stderr] Running unittests src/lib.rs (/opt/rustwide/target/debug/deps/sketchlib-649a31545b46d4cf) [INFO] [stdout] [INFO] [stdout] running 1 test [INFO] [stdout] test io::test_reorder_input_files ... ok [INFO] [stdout] [INFO] [stdout] test result: ok. 1 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.00s [INFO] [stdout] [INFO] [stderr] Running unittests src/main.rs (/opt/rustwide/target/debug/deps/sketchlib-4a2e8ba74fd452c0) [INFO] [stdout] [INFO] [stdout] running 0 tests [INFO] [stdout] [INFO] [stdout] test result: ok. 0 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.00s [INFO] [stdout] [INFO] [stderr] Running tests/completeness.rs (/opt/rustwide/target/debug/deps/completeness-bcb81881f94d26fa) [INFO] [stdout] [INFO] [stdout] running 5 tests [INFO] [stdout] test tests::test_completeness_correction_formula_exact ... ok [INFO] [stdout] test tests::test_completeness_extra_genomes ... ok [INFO] [stdout] test tests::test_completeness_ordering ... ok [INFO] [stdout] test tests::test_completeness_missing_genomes ... ok [INFO] [stderr] Running tests/concat.rs (/opt/rustwide/target/debug/deps/concat-87136052e06168df) [INFO] [stdout] test tests::test_completeness_precluster ... ok [INFO] [stdout] [INFO] [stdout] test result: ok. 5 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 5.41s [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] running 1 test [INFO] [stderr] Running tests/delete.rs (/opt/rustwide/target/debug/deps/delete-10c529dd73b536bd) [INFO] [stdout] test tests::test_concat_sketches ... ok [INFO] [stdout] [INFO] [stdout] test result: ok. 1 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 7.30s [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] running 1 test [INFO] [stdout] test tests::test_delete_sketches ... ok [INFO] [stderr] Running tests/distance.rs (/opt/rustwide/target/debug/deps/distance-f0b480a7568fcd30) [INFO] [stdout] [INFO] [stdout] test result: ok. 1 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 4.28s [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] running 3 tests [INFO] [stdout] test tests::dense_distances ... ok [INFO] [stdout] test tests::knn_dists ... ok [INFO] [stdout] test tests::subset_dists ... ok [INFO] [stdout] [INFO] [stdout] test result: ok. 3 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 10.84s [INFO] [stdout] [INFO] [stderr] Running tests/inverted.rs (/opt/rustwide/target/debug/deps/inverted-85d9c01d0c74f16a) [INFO] [stdout] [INFO] [stdout] running 4 tests [INFO] [stdout] test tests::inverted_sketch ... ok [INFO] [stdout] test tests::inverted_reorder ... ok [INFO] [stdout] test tests::inverted_precluster ... ok [INFO] [stderr] Running tests/merge.rs (/opt/rustwide/target/debug/deps/merge-2c3cf4bd02d6bde7) [INFO] [stdout] test tests::inverted_query ... ok [INFO] [stdout] [INFO] [stdout] test result: ok. 4 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 9.85s [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] running 2 tests [INFO] [stdout] test tests::test_is_compatible_with ... ok [INFO] [stdout] test tests::test_merge_sketches ... ok [INFO] [stdout] [INFO] [stdout] test result: ok. 2 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 5.78s [INFO] [stdout] [INFO] [stderr] Running tests/sketch.rs (/opt/rustwide/target/debug/deps/sketch-dfdc8fe8500b8a78) [INFO] [stdout] [INFO] [stdout] running 3 tests [INFO] [stdout] test tests::sketch_fastq ... ok [INFO] [stdout] test tests::sketch_fasta ... ok [INFO] [stdout] test tests::legacy_databases ... ok [INFO] [stdout] [INFO] [stdout] test result: ok. 3 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 3.45s [INFO] [stdout] [INFO] [stderr] Doc-tests sketchlib [INFO] [stdout] [INFO] [stdout] running 0 tests [INFO] [stdout] [INFO] [stdout] test result: ok. 0 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.00s [INFO] [stdout] [INFO] running `Command { std: "docker" "inspect" "34f9a88085456393134d4890bc2c5a58d059d8d5988804d7935028bdfcc1b976", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "34f9a88085456393134d4890bc2c5a58d059d8d5988804d7935028bdfcc1b976", kill_on_drop: false }` [INFO] [stdout] 34f9a88085456393134d4890bc2c5a58d059d8d5988804d7935028bdfcc1b976