[INFO] fetching crate gtfsort 0.2.3... [INFO] testing gtfsort-0.2.3 against master#350d0ef0ec0493e6d21cfb265cb8211a0e74d766 for pr-145330-1 [INFO] extracting crate gtfsort 0.2.3 into /workspace/builds/worker-4-tc1/source [INFO] started tweaking crates.io crate gtfsort 0.2.3 [INFO] removed 0 missing tests [INFO] finished tweaking crates.io crate gtfsort 0.2.3 [INFO] tweaked toml for crates.io crate gtfsort 0.2.3 written to /workspace/builds/worker-4-tc1/source/Cargo.toml [INFO] validating manifest of crates.io crate gtfsort 0.2.3 on toolchain 350d0ef0ec0493e6d21cfb265cb8211a0e74d766 [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+350d0ef0ec0493e6d21cfb265cb8211a0e74d766" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] crate crates.io crate gtfsort 0.2.3 already has a lockfile, it will not be regenerated [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+350d0ef0ec0493e6d21cfb265cb8211a0e74d766" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] Updating crates.io index [INFO] [stderr] Downloading crates ... [INFO] [stderr] Downloaded winreg v0.52.0 [INFO] [stderr] Downloaded simple_logger v4.3.3 [INFO] [stderr] Downloaded hyper-rustls v0.27.2 [INFO] [stderr] Downloaded indexmap v2.3.0 [INFO] [stderr] Downloaded clap_builder v4.5.13 [INFO] [stderr] Downloaded tempfile v3.11.0 [INFO] [stderr] Downloaded clap_derive v4.5.13 [INFO] [stderr] Downloaded clap v4.5.13 [INFO] [stderr] Downloaded cc v1.1.7 [INFO] [stderr] Downloaded rustls-pemfile v2.1.3 [INFO] [stderr] Downloaded reqwest v0.12.5 [INFO] [stderr] Downloaded cbindgen v0.26.0 [INFO] [stderr] Downloaded libR-sys v0.7.0 [INFO] [stderr] Downloaded rustls-webpki v0.102.6 [INFO] [stderr] Downloaded rustls v0.23.12 [INFO] [stderr] Downloaded tokio v1.39.2 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-4-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-4-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:e90291280db7d1fac5b66fc6dad9f9662629e7365a55743daf9bdf73ebc4ea79" "/opt/rustwide/cargo-home/bin/cargo" "+350d0ef0ec0493e6d21cfb265cb8211a0e74d766" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] 40715a1f17ba0ac5819230b9c6bf1afd49182d36c1be87c16a09d6eae5f7f886 [INFO] running `Command { std: "docker" "start" "-a" "40715a1f17ba0ac5819230b9c6bf1afd49182d36c1be87c16a09d6eae5f7f886", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "40715a1f17ba0ac5819230b9c6bf1afd49182d36c1be87c16a09d6eae5f7f886", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "40715a1f17ba0ac5819230b9c6bf1afd49182d36c1be87c16a09d6eae5f7f886", kill_on_drop: false }` [INFO] [stdout] 40715a1f17ba0ac5819230b9c6bf1afd49182d36c1be87c16a09d6eae5f7f886 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-4-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-4-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:e90291280db7d1fac5b66fc6dad9f9662629e7365a55743daf9bdf73ebc4ea79" "/opt/rustwide/cargo-home/bin/cargo" "+350d0ef0ec0493e6d21cfb265cb8211a0e74d766" "build" "--frozen" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] 61be7aaef3a06672ed35981930d7ffd9176a0075aa06b3534a8e1a5ffb40535a [INFO] running `Command { std: "docker" "start" "-a" "61be7aaef3a06672ed35981930d7ffd9176a0075aa06b3534a8e1a5ffb40535a", kill_on_drop: false }` [INFO] [stderr] Compiling proc-macro2 v1.0.86 [INFO] [stderr] Compiling serde v1.0.204 [INFO] [stderr] Compiling libc v0.2.155 [INFO] [stderr] Compiling indexmap v1.9.3 [INFO] [stderr] Compiling rustix v0.38.34 [INFO] [stderr] Compiling linux-raw-sys v0.4.14 [INFO] [stderr] Compiling serde_json v1.0.122 [INFO] [stderr] Compiling bitflags v2.6.0 [INFO] [stderr] Compiling os_str_bytes v6.6.1 [INFO] [stderr] Compiling syn v1.0.109 [INFO] [stderr] Compiling ahash v0.8.11 [INFO] [stderr] Compiling once_cell v1.19.0 [INFO] [stderr] Compiling textwrap v0.16.1 [INFO] [stderr] Compiling cbindgen v0.26.0 [INFO] [stderr] Compiling ryu v1.0.18 [INFO] [stderr] Compiling fastrand v2.1.0 [INFO] [stderr] Compiling termcolor v1.4.1 [INFO] [stderr] Compiling anstyle-parse v0.2.5 [INFO] [stderr] Compiling clap_lex v0.2.4 [INFO] [stderr] Compiling colorchoice v1.0.2 [INFO] [stderr] Compiling log v0.4.22 [INFO] [stderr] Compiling either v1.13.0 [INFO] [stderr] Compiling anstyle-query v1.1.1 [INFO] [stderr] Compiling anstyle v1.0.8 [INFO] [stderr] Compiling time-macros v0.2.18 [INFO] [stderr] Compiling clap_lex v0.7.2 [INFO] [stderr] Compiling allocator-api2 v0.2.18 [INFO] [stderr] Compiling num_threads v0.1.7 [INFO] [stderr] Compiling thiserror v1.0.63 [INFO] [stderr] Compiling colored v2.1.0 [INFO] [stderr] Compiling rayon v1.10.0 [INFO] [stderr] Compiling anstream v0.6.15 [INFO] [stderr] Compiling is-terminal v0.4.12 [INFO] [stderr] Compiling natord v1.0.9 [INFO] [stderr] Compiling colored v1.9.4 [INFO] [stderr] Compiling indoc v2.0.5 [INFO] [stderr] Compiling clap_builder v4.5.13 [INFO] [stderr] Compiling quote v1.0.36 [INFO] [stderr] Compiling syn v2.0.72 [INFO] [stderr] Compiling atty v0.2.14 [INFO] [stderr] Compiling clap v3.2.25 [INFO] [stderr] Compiling time v0.3.36 [INFO] [stderr] Compiling tempfile v3.11.0 [INFO] [stderr] Compiling hashbrown v0.14.5 [INFO] [stderr] Compiling simple_logger v4.3.3 [INFO] [stderr] Compiling dashmap v5.5.3 [INFO] [stderr] Compiling serde_derive v1.0.204 [INFO] [stderr] Compiling clap_derive v4.5.13 [INFO] [stderr] Compiling thiserror-impl v1.0.63 [INFO] [stderr] Compiling clap v4.5.13 [INFO] [stderr] Compiling toml v0.5.11 [INFO] [stderr] Compiling gtfsort v0.2.3 (/opt/rustwide/workdir) [INFO] [stderr] Finished `dev` profile [unoptimized + debuginfo] target(s) in 38.67s [INFO] running `Command { std: "docker" "inspect" "61be7aaef3a06672ed35981930d7ffd9176a0075aa06b3534a8e1a5ffb40535a", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "61be7aaef3a06672ed35981930d7ffd9176a0075aa06b3534a8e1a5ffb40535a", kill_on_drop: false }` [INFO] [stdout] 61be7aaef3a06672ed35981930d7ffd9176a0075aa06b3534a8e1a5ffb40535a [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-4-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-4-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:e90291280db7d1fac5b66fc6dad9f9662629e7365a55743daf9bdf73ebc4ea79" "/opt/rustwide/cargo-home/bin/cargo" "+350d0ef0ec0493e6d21cfb265cb8211a0e74d766" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] 57031759b692af8b6de40b4b4fe5860a45a8bc89a94cc8e1df375937594b7a08 [INFO] running `Command { std: "docker" "start" "-a" "57031759b692af8b6de40b4b4fe5860a45a8bc89a94cc8e1df375937594b7a08", kill_on_drop: false }` [INFO] [stderr] Compiling gtfsort v0.2.3 (/opt/rustwide/workdir) [INFO] [stderr] Finished `test` profile [unoptimized + debuginfo] target(s) in 2.35s [INFO] running `Command { std: "docker" "inspect" "57031759b692af8b6de40b4b4fe5860a45a8bc89a94cc8e1df375937594b7a08", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "57031759b692af8b6de40b4b4fe5860a45a8bc89a94cc8e1df375937594b7a08", kill_on_drop: false }` [INFO] [stdout] 57031759b692af8b6de40b4b4fe5860a45a8bc89a94cc8e1df375937594b7a08 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-4-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-4-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:e90291280db7d1fac5b66fc6dad9f9662629e7365a55743daf9bdf73ebc4ea79" "/opt/rustwide/cargo-home/bin/cargo" "+350d0ef0ec0493e6d21cfb265cb8211a0e74d766" "test" "--frozen", kill_on_drop: false }` [INFO] [stdout] e657d5aeb652383ff1622c530cc02b8d8bbf141c7e3b38b243e50d7246c3dcb1 [INFO] running `Command { std: "docker" "start" "-a" "e657d5aeb652383ff1622c530cc02b8d8bbf141c7e3b38b243e50d7246c3dcb1", kill_on_drop: false }` [INFO] [stderr] Finished `test` profile [unoptimized + debuginfo] target(s) in 0.16s [INFO] [stderr] Running unittests src/lib.rs (/opt/rustwide/target/debug/deps/gtfsort-dac47c6acf817331) [INFO] [stdout] [INFO] [stdout] running 13 tests [INFO] [stdout] test gtf::attr::tests::parse_gff_line ... ok [INFO] [stdout] test gtf::attr::tests::get_gencode_pair_from_gene_line ... ok [INFO] [stdout] test gtf::tests::outer_layer ... ok [INFO] [stdout] test gtf::tests::empty_record ... ok [INFO] [stdout] test gtf::tests::valid_record ... ok [INFO] [stdout] test gtf::attr::tests::valid_attributes ... ok [INFO] [stdout] test gtf::attr::tests::invalid_attributes ... ok [INFO] [stdout] test gtf::attr::tests::get_gencode_pair_from_exon_line ... ok [INFO] [stdout] test mmap::tests::test_mmap ... ok [INFO] [stdout] test mmap::tests::test_mmap_mut ... ok [INFO] [stdout] test mmap::tests::test_mmap_madvise ... ok [INFO] [stdout] test mmap::tests::test_mmap_mut_zero_size ... ok [INFO] [stdout] test mmap::tests::test_mmap_zero_size ... ok [INFO] [stdout] [INFO] [stdout] test result: ok. 13 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.01s [INFO] [stdout] [INFO] [stderr] Running unittests src/main.rs (/opt/rustwide/target/debug/deps/gtfsort-370f3e24a731c59d) [INFO] [stdout] [INFO] [stdout] running 0 tests [INFO] [stdout] [INFO] [stdout] test result: ok. 0 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.00s [INFO] [stdout] [INFO] [stderr] Doc-tests gtfsort [INFO] [stdout] [INFO] [stdout] running 0 tests [INFO] [stdout] [INFO] [stdout] test result: ok. 0 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.00s [INFO] [stdout] [INFO] running `Command { std: "docker" "inspect" "e657d5aeb652383ff1622c530cc02b8d8bbf141c7e3b38b243e50d7246c3dcb1", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "e657d5aeb652383ff1622c530cc02b8d8bbf141c7e3b38b243e50d7246c3dcb1", kill_on_drop: false }` [INFO] [stdout] e657d5aeb652383ff1622c530cc02b8d8bbf141c7e3b38b243e50d7246c3dcb1