[INFO] fetching crate gffkit 0.1.2...
[INFO] testing gffkit-0.1.2 against master#350d0ef0ec0493e6d21cfb265cb8211a0e74d766 for pr-145330-1
[INFO] extracting crate gffkit 0.1.2 into /workspace/builds/worker-4-tc1/source
[INFO] started tweaking crates.io crate gffkit 0.1.2
[INFO] finished tweaking crates.io crate gffkit 0.1.2
[INFO] tweaked toml for crates.io crate gffkit 0.1.2 written to /workspace/builds/worker-4-tc1/source/Cargo.toml
[INFO] validating manifest of crates.io crate gffkit 0.1.2 on toolchain 350d0ef0ec0493e6d21cfb265cb8211a0e74d766
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+350d0ef0ec0493e6d21cfb265cb8211a0e74d766" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] crate crates.io crate gffkit 0.1.2 already has a lockfile, it will not be regenerated
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+350d0ef0ec0493e6d21cfb265cb8211a0e74d766" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] [stderr]     Updating crates.io index
[INFO] [stderr]  Downloading crates ...
[INFO] [stderr]   Downloaded bytemuck v1.16.0
[INFO] [stderr]   Downloaded terminal_size v0.3.0
[INFO] [stderr]   Downloaded matrixmultiply v0.3.8
[INFO] [stderr]   Downloaded noodles v0.74.0
[INFO] [stderr]   Downloaded bio-types v1.0.1
[INFO] [stderr]   Downloaded multimap v0.9.1
[INFO] [stderr]   Downloaded triple_accel v0.4.0
[INFO] [stderr]   Downloaded bio v1.6.0
[INFO] [stderr]   Downloaded semver v0.1.20
[INFO] [stderr]   Downloaded wide v0.7.20
[INFO] [stderr]   Downloaded noodles-bgzf v0.30.0
[INFO] [stderr]   Downloaded rustc_version v0.1.7
[INFO] [stderr]   Downloaded noodles-fasta v0.38.0
[INFO] [stderr]   Downloaded editdistancek v1.0.2
[INFO] [stderr]   Downloaded bstr v1.9.1
[INFO] [stderr]   Downloaded noodles-csi v0.35.0
[INFO] [stderr]   Downloaded noodles-gtf v0.28.0
[INFO] [stderr]   Downloaded human-sort v0.2.2
[INFO] [stderr]   Downloaded noodles-gff v0.33.0
[INFO] [stderr]   Downloaded safe_arch v0.7.1
[INFO] [stderr]   Downloaded newtype_derive v0.1.6
[INFO] [stderr]   Downloaded statrs v0.16.0
[INFO] [stderr]   Downloaded noodles-core v0.15.0
[INFO] [stderr]   Downloaded proc-macro2 v1.0.83
[INFO] [stderr]   Downloaded itertools-num v0.1.3
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-4-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-4-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:e90291280db7d1fac5b66fc6dad9f9662629e7365a55743daf9bdf73ebc4ea79" "/opt/rustwide/cargo-home/bin/cargo" "+350d0ef0ec0493e6d21cfb265cb8211a0e74d766" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] [stdout] f7d60783fdaefa95a69f0344e2560e8f96702afa9b0bff31f30a75dc6748f84f
[INFO] running `Command { std: "docker" "start" "-a" "f7d60783fdaefa95a69f0344e2560e8f96702afa9b0bff31f30a75dc6748f84f", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "f7d60783fdaefa95a69f0344e2560e8f96702afa9b0bff31f30a75dc6748f84f", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "f7d60783fdaefa95a69f0344e2560e8f96702afa9b0bff31f30a75dc6748f84f", kill_on_drop: false }`
[INFO] [stdout] f7d60783fdaefa95a69f0344e2560e8f96702afa9b0bff31f30a75dc6748f84f
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-4-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-4-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:e90291280db7d1fac5b66fc6dad9f9662629e7365a55743daf9bdf73ebc4ea79" "/opt/rustwide/cargo-home/bin/cargo" "+350d0ef0ec0493e6d21cfb265cb8211a0e74d766" "build" "--frozen" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] 7ec1432985c6961c93c38ef4b8431af8f8240d46446faabd255704ffaccb58c0
[INFO] running `Command { std: "docker" "start" "-a" "7ec1432985c6961c93c38ef4b8431af8f8240d46446faabd255704ffaccb58c0", kill_on_drop: false }`
[INFO] [stderr]    Compiling proc-macro2 v1.0.83
[INFO] [stderr]    Compiling unicode-ident v1.0.12
[INFO] [stderr]    Compiling autocfg v1.3.0
[INFO] [stderr]    Compiling libc v0.2.155
[INFO] [stderr]    Compiling libm v0.2.8
[INFO] [stderr]    Compiling memchr v2.7.2
[INFO] [stderr]    Compiling crossbeam-utils v0.8.20
[INFO] [stderr]    Compiling cc v1.0.98
[INFO] [stderr]    Compiling adler v1.0.2
[INFO] [stderr]    Compiling pkg-config v0.3.30
[INFO] [stderr]    Compiling hashbrown v0.14.5
[INFO] [stderr]    Compiling serde v1.0.202
[INFO] [stderr]    Compiling bit-vec v0.6.3
[INFO] [stderr]    Compiling bytes v1.6.0
[INFO] [stderr]    Compiling bytemuck v1.16.0
[INFO] [stderr]    Compiling rustversion v1.0.17
[INFO] [stderr]    Compiling miniz_oxide v0.7.3
[INFO] [stderr]    Compiling num-traits v0.2.19
[INFO] [stderr]    Compiling matrixmultiply v0.3.8
[INFO] [stderr]    Compiling regex-syntax v0.8.3
[INFO] [stderr]    Compiling rustix v0.38.34
[INFO] [stderr]    Compiling semver v0.1.20
[INFO] [stderr]    Compiling safe_arch v0.7.1
[INFO] [stderr]    Compiling feature-probe v0.1.1
[INFO] [stderr]    Compiling flate2 v1.0.30
[INFO] [stderr]    Compiling rustc_version v0.1.7
[INFO] [stderr]    Compiling quote v1.0.36
[INFO] [stderr]    Compiling linux-raw-sys v0.4.14
[INFO] [stderr]    Compiling utf8parse v0.2.1
[INFO] [stderr]    Compiling syn v2.0.65
[INFO] [stderr]    Compiling indexmap v2.2.6
[INFO] [stderr]    Compiling syn v1.0.109
[INFO] [stderr]    Compiling bstr v1.9.1
[INFO] [stderr]    Compiling aho-corasick v1.1.3
[INFO] [stderr]    Compiling crossbeam-channel v0.5.13
[INFO] [stderr]    Compiling wide v0.7.20
[INFO] [stderr]    Compiling getrandom v0.2.15
[INFO] [stderr]    Compiling thiserror v1.0.61
[INFO] [stderr]    Compiling bitflags v2.5.0
[INFO] [stderr]    Compiling anstyle-parse v0.2.4
[INFO] [stderr]    Compiling rand_core v0.6.4
[INFO] [stderr]    Compiling newtype_derive v0.1.6
[INFO] [stderr]    Compiling noodles-core v0.15.0
[INFO] [stderr]    Compiling bv v0.11.1
[INFO] [stderr]    Compiling rand_chacha v0.3.1
[INFO] [stderr]    Compiling noodles-bgzf v0.30.0
[INFO] [stderr]    Compiling anstyle v1.0.7
[INFO] [stderr]    Compiling colorchoice v1.0.1
[INFO] [stderr]    Compiling is_terminal_polyfill v1.70.0
[INFO] [stderr]    Compiling anstyle-query v1.0.3
[INFO] [stderr]    Compiling anyhow v1.0.86
[INFO] [stderr]    Compiling rand v0.8.5
[INFO] [stderr]    Compiling noodles-csi v0.35.0
[INFO] [stderr]    Compiling anstream v0.6.14
[INFO] [stderr]    Compiling csv-core v0.1.11
[INFO] [stderr]    Compiling bzip2-sys v0.1.11+1.0.8
[INFO] [stderr]    Compiling lzma-sys v0.1.20
[INFO] [stderr]    Compiling num-integer v0.1.46
[INFO] [stderr]    Compiling num-complex v0.4.6
[INFO] [stderr]    Compiling approx v0.5.1
[INFO] [stderr]    Compiling num-rational v0.4.2
[INFO] [stderr]    Compiling either v1.12.0
[INFO] [stderr]    Compiling clap_lex v0.7.0
[INFO] [stderr]    Compiling itoa v1.0.11
[INFO] [stderr]    Compiling noodles-gff v0.33.0
[INFO] [stderr]    Compiling terminal_size v0.3.0
[INFO] [stderr]    Compiling ndarray v0.15.6
[INFO] [stderr]    Compiling itertools v0.11.0
[INFO] [stderr]    Compiling clap_builder v4.5.2
[INFO] [stderr]    Compiling noodles-gtf v0.28.0
[INFO] [stderr]    Compiling rand_distr v0.4.3
[INFO] [stderr]    Compiling petgraph v0.6.5
[INFO] [stderr]    Compiling regex-automata v0.4.6
[INFO] [stderr]    Compiling itertools-num v0.1.3
[INFO] [stderr]    Compiling ordered-float v3.9.2
[INFO] [stderr]    Compiling noodles-fasta v0.38.0
[INFO] [stderr]    Compiling simba v0.6.0
[INFO] [stderr]    Compiling is-terminal v0.4.12
[INFO] [stderr]    Compiling bit-set v0.5.3
[INFO] [stderr]    Compiling editdistancek v1.0.2
[INFO] [stderr]    Compiling log v0.4.21
[INFO] [stderr]    Compiling triple_accel v0.4.0
[INFO] [stderr]    Compiling custom_derive v0.1.7
[INFO] [stderr]    Compiling bytecount v0.6.8
[INFO] [stderr]    Compiling iana-time-zone v0.1.60
[INFO] [stderr]    Compiling strum v0.25.0
[INFO] [stderr]    Compiling humantime v2.1.0
[INFO] [stderr]    Compiling noodles v0.74.0
[INFO] [stderr]    Compiling bzip2 v0.4.4
[INFO] [stderr]    Compiling xz2 v0.1.7
[INFO] [stderr]    Compiling chrono v0.4.38
[INFO] [stderr]    Compiling atty v0.2.14
[INFO] [stderr]    Compiling human-sort v0.2.2
[INFO] [stderr]    Compiling nalgebra-macros v0.1.0
[INFO] [stderr]    Compiling derive-new v0.5.9
[INFO] [stderr]    Compiling serde_derive v1.0.202
[INFO] [stderr]    Compiling thiserror-impl v1.0.61
[INFO] [stderr]    Compiling strum_macros v0.25.3
[INFO] [stderr]    Compiling enum-map-derive v0.17.0
[INFO] [stderr]    Compiling clap_derive v4.5.4
[INFO] [stderr]    Compiling enum-map v2.7.3
[INFO] [stderr]    Compiling regex v1.10.4
[INFO] [stderr]    Compiling env_logger v0.10.2
[INFO] [stderr]    Compiling bio-types v1.0.1
[INFO] [stderr]    Compiling clap v4.5.4
[INFO] [stderr]    Compiling nalgebra v0.29.0
[INFO] [stderr]    Compiling vec_map v0.8.2
[INFO] [stderr]    Compiling csv v1.3.0
[INFO] [stderr]    Compiling multimap v0.9.1
[INFO] [stderr]    Compiling statrs v0.16.0
[INFO] [stderr]    Compiling bio v1.6.0
[INFO] [stderr]    Compiling gffkit v0.1.2 (/opt/rustwide/workdir)
[INFO] [stderr]     Finished `dev` profile [unoptimized + debuginfo] target(s) in 44.37s
[INFO] running `Command { std: "docker" "inspect" "7ec1432985c6961c93c38ef4b8431af8f8240d46446faabd255704ffaccb58c0", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "7ec1432985c6961c93c38ef4b8431af8f8240d46446faabd255704ffaccb58c0", kill_on_drop: false }`
[INFO] [stdout] 7ec1432985c6961c93c38ef4b8431af8f8240d46446faabd255704ffaccb58c0
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-4-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-4-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:e90291280db7d1fac5b66fc6dad9f9662629e7365a55743daf9bdf73ebc4ea79" "/opt/rustwide/cargo-home/bin/cargo" "+350d0ef0ec0493e6d21cfb265cb8211a0e74d766" "test" "--frozen" "--no-run" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] 1bf7e7c3861b2945ae2def7a81f7e69b9c5557d238191cf9b51668e448ed7920
[INFO] running `Command { std: "docker" "start" "-a" "1bf7e7c3861b2945ae2def7a81f7e69b9c5557d238191cf9b51668e448ed7920", kill_on_drop: false }`
[INFO] [stderr]    Compiling gffkit v0.1.2 (/opt/rustwide/workdir)
[INFO] [stderr]     Finished `test` profile [unoptimized + debuginfo] target(s) in 0.60s
[INFO] running `Command { std: "docker" "inspect" "1bf7e7c3861b2945ae2def7a81f7e69b9c5557d238191cf9b51668e448ed7920", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "1bf7e7c3861b2945ae2def7a81f7e69b9c5557d238191cf9b51668e448ed7920", kill_on_drop: false }`
[INFO] [stdout] 1bf7e7c3861b2945ae2def7a81f7e69b9c5557d238191cf9b51668e448ed7920
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-4-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-4-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:e90291280db7d1fac5b66fc6dad9f9662629e7365a55743daf9bdf73ebc4ea79" "/opt/rustwide/cargo-home/bin/cargo" "+350d0ef0ec0493e6d21cfb265cb8211a0e74d766" "test" "--frozen", kill_on_drop: false }`
[INFO] [stdout] a8e6b2a2cf03ad2c492cf675ff1c60cf620a832d9f385f635772621ae005ba23
[INFO] running `Command { std: "docker" "start" "-a" "a8e6b2a2cf03ad2c492cf675ff1c60cf620a832d9f385f635772621ae005ba23", kill_on_drop: false }`
[INFO] [stderr]     Finished `test` profile [unoptimized + debuginfo] target(s) in 0.17s
[INFO] [stderr]      Running unittests src/main.rs (/opt/rustwide/target/debug/deps/gffkit-9d69e774d485c07a)
[INFO] [stdout] 
[INFO] [stdout] running 0 tests
[INFO] [stdout] 
[INFO] [stdout] test result: ok. 0 passed; 0 failed; 0 ignored; 0 measured; 0 filtered out; finished in 0.00s
[INFO] [stdout] 
[INFO] running `Command { std: "docker" "inspect" "a8e6b2a2cf03ad2c492cf675ff1c60cf620a832d9f385f635772621ae005ba23", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "a8e6b2a2cf03ad2c492cf675ff1c60cf620a832d9f385f635772621ae005ba23", kill_on_drop: false }`
[INFO] [stdout] a8e6b2a2cf03ad2c492cf675ff1c60cf620a832d9f385f635772621ae005ba23