[INFO] cloning repository https://github.com/sriram98v/ml-seqclass [INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/sriram98v/ml-seqclass" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fsriram98v%2Fml-seqclass", kill_on_drop: false }` [INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fsriram98v%2Fml-seqclass'... [INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }` [INFO] [stdout] fb58ec3952fd32a803944005d082a5c397ba5350 [INFO] checking sriram98v/ml-seqclass against master#fce0e74720d199eb7839fdb51af35ac5226da178 for pr-145262 [INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fsriram98v%2Fml-seqclass" "/workspace/builds/worker-2-tc1/source", kill_on_drop: false }` [INFO] [stderr] Cloning into '/workspace/builds/worker-2-tc1/source'... [INFO] [stderr] done. [INFO] started tweaking git repo https://github.com/sriram98v/ml-seqclass [INFO] finished tweaking git repo https://github.com/sriram98v/ml-seqclass [INFO] tweaked toml for git repo https://github.com/sriram98v/ml-seqclass written to /workspace/builds/worker-2-tc1/source/Cargo.toml [INFO] validating manifest of git repo https://github.com/sriram98v/ml-seqclass on toolchain fce0e74720d199eb7839fdb51af35ac5226da178 [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+fce0e74720d199eb7839fdb51af35ac5226da178" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] crate git repo https://github.com/sriram98v/ml-seqclass already has a lockfile, it will not be regenerated [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+fce0e74720d199eb7839fdb51af35ac5226da178" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] [stderr] Updating crates.io index [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] [stderr] Downloading crates ... [INFO] [stderr] Downloaded testing_table v0.3.0 [INFO] [stderr] Downloaded py_literal v0.4.0 [INFO] [stderr] Downloaded tabled_derive v0.11.0 [INFO] [stderr] Downloaded papergrid v0.17.0 [INFO] [stderr] Downloaded multimap v0.9.1 [INFO] [stderr] Downloaded buffer-redux v1.0.2 [INFO] [stderr] Downloaded libsufr v0.7.12 [INFO] [stderr] Downloaded zip v2.4.1 [INFO] [stderr] Downloaded wide v0.7.17 [INFO] [stderr] Downloaded liblzma v0.3.6 [INFO] [stderr] Downloaded tabled v0.20.0 [INFO] [stderr] Downloaded format_num v0.1.0 [INFO] [stderr] Downloaded bio v1.6.0 [INFO] [stderr] Downloaded ndarray-npy v0.9.1 [INFO] [stderr] Downloaded bytecount v0.6.8 [INFO] [stderr] Downloaded needletail v0.6.3 [INFO] [stderr] Downloaded liblzma-sys v0.3.13 [INFO] [stderr] Downloaded kgst v1.0.0 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:7ad1b28ee6f5f7f699f6cf7015098d6ccdd96d6f2d78dd06228f5b4c9faf309c" "/opt/rustwide/cargo-home/bin/cargo" "+fce0e74720d199eb7839fdb51af35ac5226da178" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }` [INFO] [stdout] 377eaa9d49dc589907c3835f884519dd8f82e12cd2deb867d82492803fafee06 [INFO] running `Command { std: "docker" "start" "-a" "377eaa9d49dc589907c3835f884519dd8f82e12cd2deb867d82492803fafee06", kill_on_drop: false }` [INFO] running `Command { std: "docker" "inspect" "377eaa9d49dc589907c3835f884519dd8f82e12cd2deb867d82492803fafee06", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "377eaa9d49dc589907c3835f884519dd8f82e12cd2deb867d82492803fafee06", kill_on_drop: false }` [INFO] [stdout] 377eaa9d49dc589907c3835f884519dd8f82e12cd2deb867d82492803fafee06 [INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-2-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:7ad1b28ee6f5f7f699f6cf7015098d6ccdd96d6f2d78dd06228f5b4c9faf309c" "/opt/rustwide/cargo-home/bin/cargo" "+fce0e74720d199eb7839fdb51af35ac5226da178" "check" "--frozen" "--all" "--all-targets" "--message-format=json", kill_on_drop: false }` [INFO] [stdout] 66edc8ffd3d127e934b25e51b1db25730ff0a7c1e8b02691408c0d954c348b20 [INFO] running `Command { std: "docker" "start" "-a" "66edc8ffd3d127e934b25e51b1db25730ff0a7c1e8b02691408c0d954c348b20", kill_on_drop: false }` [INFO] [stderr] Compiling proc-macro2 v1.0.94 [INFO] [stderr] Compiling autocfg v1.3.0 [INFO] [stderr] Compiling libc v0.2.174 [INFO] [stderr] Checking memchr v2.7.2 [INFO] [stderr] Compiling libm v0.2.8 [INFO] [stderr] Compiling syn v1.0.109 [INFO] [stderr] Checking getrandom v0.2.15 [INFO] [stderr] Checking rawpointer v0.2.1 [INFO] [stderr] Checking either v1.11.0 [INFO] [stderr] Compiling serde v1.0.219 [INFO] [stderr] Checking bytemuck v1.15.0 [INFO] [stderr] Checking utf8parse v0.2.1 [INFO] [stderr] Checking log v0.4.26 [INFO] [stderr] Checking hashbrown v0.15.5 [INFO] [stderr] Compiling rustversion v1.0.16 [INFO] [stderr] Checking anstyle-query v1.0.3 [INFO] [stderr] Checking is_terminal_polyfill v1.70.0 [INFO] [stderr] Checking anstyle v1.0.7 [INFO] [stderr] Checking anstyle-parse v0.2.4 [INFO] [stderr] Compiling ucd-trie v0.1.7 [INFO] [stderr] Compiling semver v0.1.20 [INFO] [stderr] Checking rand_core v0.6.4 [INFO] [stderr] Checking safe_arch v0.7.1 [INFO] [stderr] Checking bytecount v0.6.8 [INFO] [stderr] Checking colorchoice v1.0.1 [INFO] [stderr] Checking crossbeam-deque v0.8.5 [INFO] [stderr] Compiling rustc_version v0.1.7 [INFO] [stderr] Checking getrandom v0.3.3 [INFO] [stderr] Compiling num-traits v0.2.19 [INFO] [stderr] Compiling matrixmultiply v0.3.8 [INFO] [stderr] Checking anstream v0.6.14 [INFO] [stderr] Checking indexmap v2.10.0 [INFO] [stderr] Checking rand_chacha v0.3.1 [INFO] [stderr] Checking unicode-width v0.1.12 [INFO] [stderr] Compiling zstd-safe v7.2.4 [INFO] [stderr] Compiling thiserror v1.0.60 [INFO] [stderr] Checking rayon-core v1.12.1 [INFO] [stderr] Checking unicode-width v0.2.1 [INFO] [stderr] Compiling newtype_derive v0.1.6 [INFO] [stderr] Compiling rustix v1.0.8 [INFO] [stderr] Checking aho-corasick v1.1.3 [INFO] [stderr] Checking csv-core v0.1.11 [INFO] [stderr] Checking rand v0.8.5 [INFO] [stderr] Checking gimli v0.28.1 [INFO] [stderr] Compiling portable-atomic v1.11.1 [INFO] [stderr] Checking wide v0.7.17 [INFO] [stderr] Compiling jobserver v0.1.33 [INFO] [stderr] Compiling quote v1.0.40 [INFO] [stderr] Checking rayon v1.10.0 [INFO] [stderr] Compiling error-chain v0.12.4 [INFO] [stderr] Checking object v0.32.2 [INFO] [stderr] Checking miniz_oxide v0.7.2 [INFO] [stderr] Checking rand_core v0.9.3 [INFO] [stderr] Checking dirs v1.0.5 [INFO] 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Compiling thiserror-impl v1.0.60 [INFO] [stderr] Compiling strum_macros v0.25.3 [INFO] [stderr] Compiling enum-map-derive v0.17.0 [INFO] [stderr] Compiling displaydoc v0.2.5 [INFO] [stderr] Compiling clap_derive v4.5.4 [INFO] [stderr] Checking env_logger v0.11.8 [INFO] [stderr] Compiling tabled_derive v0.11.0 [INFO] [stderr] Checking enum-map v2.7.3 [INFO] [stderr] Checking liblzma v0.3.6 [INFO] [stderr] Compiling thiserror v2.0.12 [INFO] [stderr] Compiling pest v2.7.15 [INFO] [stderr] Checking tabled v0.20.0 [INFO] [stderr] Checking clap v4.5.4 [INFO] [stderr] Checking bio-types v1.0.1 [INFO] [stderr] Checking nalgebra v0.29.0 [INFO] [stderr] Compiling pest_meta v2.7.15 [INFO] [stderr] Checking zstd v0.13.3 [INFO] [stderr] Checking needletail v0.6.3 [INFO] [stderr] Compiling pest_generator v2.7.15 [INFO] [stderr] Compiling pest_derive v2.7.15 [INFO] [stderr] Checking py_literal v0.4.0 [INFO] [stderr] Checking ndarray-npy v0.9.1 [INFO] [stderr] Checking csv v1.3.0 [INFO] [stderr] Checking multimap v0.9.1 [INFO] [stderr] Checking vec_map v0.8.2 [INFO] [stderr] Checking bv v0.11.1 [INFO] [stderr] Checking bincode v1.3.3 [INFO] [stderr] Checking libsufr v0.7.12 [INFO] [stderr] Checking prettytable-rs v0.8.0 [INFO] [stderr] Checking shrust v0.0.7 [INFO] [stderr] Checking statrs v0.16.0 [INFO] [stderr] Checking bio v1.6.0 [INFO] [stderr] Checking kgst v1.0.0 [INFO] [stderr] Checking seq_class v0.2.0 (/opt/rustwide/workdir) [INFO] [stdout] warning: value assigned to `w` is never read [INFO] [stdout] --> src/main.rs:143:13 [INFO] [stdout] | [INFO] [stdout] 143 | let mut w = Array::::zeros((num_reads, num_srcs).f()); [INFO] [stdout] | ^ [INFO] [stdout] | [INFO] [stdout] = help: maybe it is overwritten before being read? [INFO] [stdout] = note: `#[warn(unused_assignments)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stdout] warning: value assigned to `w` is never read [INFO] [stdout] --> src/main.rs:143:13 [INFO] [stdout] | [INFO] [stdout] 143 | let mut w = Array::::zeros((num_reads, num_srcs).f()); [INFO] [stdout] | ^ [INFO] [stdout] | [INFO] [stdout] = help: maybe it is overwritten before being read? [INFO] [stdout] = note: `#[warn(unused_assignments)]` on by default [INFO] [stdout] [INFO] [stdout] [INFO] [stderr] Finished `dev` profile [unoptimized + debuginfo] target(s) in 53.77s [INFO] running `Command { std: "docker" "inspect" "66edc8ffd3d127e934b25e51b1db25730ff0a7c1e8b02691408c0d954c348b20", kill_on_drop: false }` [INFO] running `Command { std: "docker" "rm" "-f" "66edc8ffd3d127e934b25e51b1db25730ff0a7c1e8b02691408c0d954c348b20", kill_on_drop: false }` [INFO] [stdout] 66edc8ffd3d127e934b25e51b1db25730ff0a7c1e8b02691408c0d954c348b20