[INFO] cloning repository https://github.com/sharkLoc/vcfkit [INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/sharkLoc/vcfkit" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2FsharkLoc%2Fvcfkit", kill_on_drop: false }` [INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2FsharkLoc%2Fvcfkit'... [INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }` [INFO] [stdout] 3e53c91db3890b7360388ab428e53439989dd339 [INFO] checking sharkLoc/vcfkit against try#c4ca24658d934444a28db36abebef17a8651701a for pr-144156 [INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2FsharkLoc%2Fvcfkit" "/workspace/builds/worker-5-tc2/source", kill_on_drop: false }` [INFO] [stderr] Cloning into '/workspace/builds/worker-5-tc2/source'... [INFO] [stderr] done. [INFO] started tweaking git repo https://github.com/sharkLoc/vcfkit [INFO] finished tweaking git repo https://github.com/sharkLoc/vcfkit [INFO] tweaked toml for git repo https://github.com/sharkLoc/vcfkit written to /workspace/builds/worker-5-tc2/source/Cargo.toml [INFO] validating manifest of git repo https://github.com/sharkLoc/vcfkit on toolchain c4ca24658d934444a28db36abebef17a8651701a [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+c4ca24658d934444a28db36abebef17a8651701a" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] crate git repo https://github.com/sharkLoc/vcfkit already has a lockfile, it will not be regenerated [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+c4ca24658d934444a28db36abebef17a8651701a" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] Updating crates.io index [INFO] [stderr] Downloading crates ... [INFO] [stderr] Downloaded fs-utils v1.1.4 [INFO] [stderr] Downloaded bio-types v0.13.0 [INFO] [stderr] Downloaded rust-htslib v0.41.1 [INFO] [stderr] Downloaded clap v4.1.9 [INFO] [stderr] Downloaded curl-sys v0.4.60+curl-7.88.1 [INFO] [stderr] Downloaded hts-sys v2.0.3 [INFO] [stderr] error: failed to unpack package `hts-sys v2.0.3` [INFO] [stderr] [INFO] [stderr] Caused by: [INFO] [stderr] failed to unpack entry at `hts-sys-2.0.3/htslib/htscodecs/htscodecs/pack.c` [INFO] [stderr] [INFO] [stderr] Caused by: [INFO] [stderr] failed to unpack `/workspace/cargo-home/registry/src/index.crates.io-1949cf8c6b5b557f/hts-sys-2.0.3/htslib/htscodecs/htscodecs/pack.c` [INFO] [stderr] [INFO] [stderr] Caused by: [INFO] [stderr] failed to unpack `hts-sys-2.0.3/htslib/htscodecs/htscodecs/pack.c` into `/workspace/cargo-home/registry/src/index.crates.io-1949cf8c6b5b557f/hts-sys-2.0.3/htslib/htscodecs/htscodecs/pack.c` [INFO] [stderr] [INFO] [stderr] Caused by: [INFO] [stderr] No space left on device (os error 28) [INFO] checking sharkLoc/vcfkit against try#c4ca24658d934444a28db36abebef17a8651701a for pr-144156 [INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2FsharkLoc%2Fvcfkit" "/workspace/builds/worker-5-tc2/source", kill_on_drop: false }` [INFO] [stderr] Cloning into '/workspace/builds/worker-5-tc2/source'... [INFO] [stderr] done. [INFO] started tweaking git repo https://github.com/sharkLoc/vcfkit [INFO] finished tweaking git repo https://github.com/sharkLoc/vcfkit [INFO] tweaked toml for git repo https://github.com/sharkLoc/vcfkit written to /workspace/builds/worker-5-tc2/source/Cargo.toml [INFO] validating manifest of git repo https://github.com/sharkLoc/vcfkit on toolchain c4ca24658d934444a28db36abebef17a8651701a [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+c4ca24658d934444a28db36abebef17a8651701a" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] crate git repo https://github.com/sharkLoc/vcfkit already has a lockfile, it will not be regenerated [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+c4ca24658d934444a28db36abebef17a8651701a" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] [stderr] Blocking waiting for file lock on package cache [INFO] [stderr] error: failed to download `hts-sys v2.0.3` [INFO] [stderr] [INFO] [stderr] Caused by: [INFO] [stderr] unable to get packages from source [INFO] [stderr] [INFO] [stderr] Caused by: [INFO] [stderr] failed to unpack package `hts-sys v2.0.3` [INFO] [stderr] [INFO] [stderr] Caused by: [INFO] [stderr] failed to unpack entry at `hts-sys-2.0.3/htslib/htscodecs/tests/dat/fqzcomp/qvar.2` [INFO] [stderr] [INFO] [stderr] Caused by: [INFO] [stderr] failed to unpack `/workspace/cargo-home/registry/src/index.crates.io-1949cf8c6b5b557f/hts-sys-2.0.3/htslib/htscodecs/tests/dat/fqzcomp/qvar.2` [INFO] [stderr] [INFO] [stderr] Caused by: [INFO] [stderr] failed to unpack `hts-sys-2.0.3/htslib/htscodecs/tests/dat/fqzcomp/qvar.2` into `/workspace/cargo-home/registry/src/index.crates.io-1949cf8c6b5b557f/hts-sys-2.0.3/htslib/htscodecs/tests/dat/fqzcomp/qvar.2` [INFO] [stderr] [INFO] [stderr] Caused by: [INFO] [stderr] No space left on device (os error 28) [INFO] checking sharkLoc/vcfkit against try#c4ca24658d934444a28db36abebef17a8651701a for pr-144156 [INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2FsharkLoc%2Fvcfkit" "/workspace/builds/worker-5-tc2/source", kill_on_drop: false }` [INFO] [stderr] Cloning into '/workspace/builds/worker-5-tc2/source'... [INFO] [stderr] done. [INFO] started tweaking git repo https://github.com/sharkLoc/vcfkit [INFO] finished tweaking git repo https://github.com/sharkLoc/vcfkit [INFO] tweaked toml for git repo https://github.com/sharkLoc/vcfkit written to /workspace/builds/worker-5-tc2/source/Cargo.toml [INFO] validating manifest of git repo https://github.com/sharkLoc/vcfkit on toolchain c4ca24658d934444a28db36abebef17a8651701a [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+c4ca24658d934444a28db36abebef17a8651701a" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] crate git repo https://github.com/sharkLoc/vcfkit already has a lockfile, it will not be regenerated [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+c4ca24658d934444a28db36abebef17a8651701a" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] error: failed to download `hts-sys v2.0.3` [INFO] [stderr] [INFO] [stderr] Caused by: [INFO] [stderr] unable to get packages from source [INFO] [stderr] [INFO] [stderr] Caused by: [INFO] [stderr] failed to unpack package `hts-sys v2.0.3` [INFO] [stderr] [INFO] [stderr] Caused by: [INFO] [stderr] failed to unpack entry at `hts-sys-2.0.3/htslib/htscodecs/tests/dat/qvar` [INFO] [stderr] [INFO] [stderr] Caused by: [INFO] [stderr] failed to unpack `/workspace/cargo-home/registry/src/index.crates.io-1949cf8c6b5b557f/hts-sys-2.0.3/htslib/htscodecs/tests/dat/qvar` [INFO] [stderr] [INFO] [stderr] Caused by: [INFO] [stderr] failed to unpack `hts-sys-2.0.3/htslib/htscodecs/tests/dat/qvar` into `/workspace/cargo-home/registry/src/index.crates.io-1949cf8c6b5b557f/hts-sys-2.0.3/htslib/htscodecs/tests/dat/qvar` [INFO] [stderr] [INFO] [stderr] Caused by: [INFO] [stderr] No space left on device (os error 28) [INFO] checking sharkLoc/vcfkit against try#c4ca24658d934444a28db36abebef17a8651701a for pr-144156 [INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2FsharkLoc%2Fvcfkit" "/workspace/builds/worker-5-tc2/source", kill_on_drop: false }` [INFO] [stderr] Cloning into '/workspace/builds/worker-5-tc2/source'... [INFO] [stderr] done. [INFO] started tweaking git repo https://github.com/sharkLoc/vcfkit [INFO] finished tweaking git repo https://github.com/sharkLoc/vcfkit [INFO] tweaked toml for git repo https://github.com/sharkLoc/vcfkit written to /workspace/builds/worker-5-tc2/source/Cargo.toml [INFO] validating manifest of git repo https://github.com/sharkLoc/vcfkit on toolchain c4ca24658d934444a28db36abebef17a8651701a [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+c4ca24658d934444a28db36abebef17a8651701a" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }` [INFO] crate git repo https://github.com/sharkLoc/vcfkit already has a lockfile, it will not be regenerated [INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+c4ca24658d934444a28db36abebef17a8651701a" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }` [INFO] [stderr] error: failed to download `hts-sys v2.0.3` [INFO] [stderr] [INFO] [stderr] Caused by: [INFO] [stderr] unable to get packages from source [INFO] [stderr] [INFO] [stderr] Caused by: [INFO] [stderr] failed to unpack package `hts-sys v2.0.3` [INFO] [stderr] [INFO] [stderr] Caused by: [INFO] [stderr] failed to unpack entry at `hts-sys-2.0.3/htslib/htscodecs/tests/dat/r4x16/q4.4` [INFO] [stderr] [INFO] [stderr] Caused by: [INFO] [stderr] failed to unpack `/workspace/cargo-home/registry/src/index.crates.io-1949cf8c6b5b557f/hts-sys-2.0.3/htslib/htscodecs/tests/dat/r4x16/q4.4` [INFO] [stderr] [INFO] [stderr] Caused by: [INFO] [stderr] failed to unpack `hts-sys-2.0.3/htslib/htscodecs/tests/dat/r4x16/q4.4` into `/workspace/cargo-home/registry/src/index.crates.io-1949cf8c6b5b557f/hts-sys-2.0.3/htslib/htscodecs/tests/dat/r4x16/q4.4` [INFO] [stderr] [INFO] [stderr] Caused by: [INFO] [stderr] No space left on device (os error 28) [INFO] checking sharkLoc/vcfkit against try#c4ca24658d934444a28db36abebef17a8651701a for pr-144156 [INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2FsharkLoc%2Fvcfkit" "/workspace/builds/worker-5-tc2/source", kill_on_drop: false }` [INFO] [stderr] Cloning into '/workspace/builds/worker-5-tc2/source'... [INFO] [stderr] done. [INFO] [stderr] fatal: sha1 file '/workspace/builds/worker-5-tc2/source/.git/index.lock' write error. Out of diskspace [INFO] [stderr] warning: Clone succeeded, but checkout failed. [INFO] [stderr] You can inspect what was checked out with 'git status' [INFO] [stderr] and retry with 'git restore --source=HEAD :/' [INFO] [stderr] failed to checkout https://github.com/sharkLoc/vcfkit Caused by: command failed: exit status: 128