[INFO] cloning repository https://github.com/cmdcolin/vcfverifier
[INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/cmdcolin/vcfverifier" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fcmdcolin%2Fvcfverifier", kill_on_drop: false }`
[INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fcmdcolin%2Fvcfverifier'...
[INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }`
[INFO] [stdout] 2a31faf247750e72ddef930654548c336102dbdb
[INFO] checking cmdcolin/vcfverifier against master#64b185eddaa1d7ddf5e0c024be23b9cbba6c1722 for pr-143929
[INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fcmdcolin%2Fvcfverifier" "/workspace/builds/worker-1-tc1/source", kill_on_drop: false }`
[INFO] [stderr] Cloning into '/workspace/builds/worker-1-tc1/source'...
[INFO] [stderr] done.
[INFO] started tweaking git repo https://github.com/cmdcolin/vcfverifier
[INFO] finished tweaking git repo https://github.com/cmdcolin/vcfverifier
[INFO] tweaked toml for git repo https://github.com/cmdcolin/vcfverifier written to /workspace/builds/worker-1-tc1/source/Cargo.toml
[INFO] validating manifest of git repo https://github.com/cmdcolin/vcfverifier on toolchain 64b185eddaa1d7ddf5e0c024be23b9cbba6c1722
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+64b185eddaa1d7ddf5e0c024be23b9cbba6c1722" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] crate git repo https://github.com/cmdcolin/vcfverifier already has a lockfile, it will not be regenerated
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+64b185eddaa1d7ddf5e0c024be23b9cbba6c1722" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] [stderr]     Updating crates.io index
[INFO] [stderr]     Blocking waiting for file lock on package cache
[INFO] [stderr]  Downloading crates ...
[INFO] [stderr]   Downloaded faimm v0.5.0
[INFO] [stderr]   Downloaded rust-htslib v0.49.0
[INFO] [stderr]   Downloaded curl-sys v0.4.78+curl-8.11.0
[INFO] [stderr]   Downloaded hts-sys v2.2.0
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-1-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-1-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:90999bfc7ae267e83380e433d8e61a7c072ca6729e92edbae886d3423b3a6f4c" "/opt/rustwide/cargo-home/bin/cargo" "+64b185eddaa1d7ddf5e0c024be23b9cbba6c1722" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] [stdout] 6d81243f7d59c631f5573f18d73a45611382bf0c97b60132b62206be1bba571d
[INFO] running `Command { std: "docker" "start" "-a" "6d81243f7d59c631f5573f18d73a45611382bf0c97b60132b62206be1bba571d", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "6d81243f7d59c631f5573f18d73a45611382bf0c97b60132b62206be1bba571d", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "6d81243f7d59c631f5573f18d73a45611382bf0c97b60132b62206be1bba571d", kill_on_drop: false }`
[INFO] [stdout] 6d81243f7d59c631f5573f18d73a45611382bf0c97b60132b62206be1bba571d
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-1-tc1/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-1-tc1/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:90999bfc7ae267e83380e433d8e61a7c072ca6729e92edbae886d3423b3a6f4c" "/opt/rustwide/cargo-home/bin/cargo" "+64b185eddaa1d7ddf5e0c024be23b9cbba6c1722" "check" "--frozen" "--all" "--all-targets" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] dd571c120553a9eccca40c1e455782648630fe0d66181cb0c646523c7f6e9eb5
[INFO] running `Command { std: "docker" "start" "-a" "dd571c120553a9eccca40c1e455782648630fe0d66181cb0c646523c7f6e9eb5", kill_on_drop: false }`
[INFO] [stderr]    Compiling proc-macro2 v1.0.92
[INFO] [stderr]    Compiling unicode-ident v1.0.14
[INFO] [stderr]    Compiling libc v0.2.167
[INFO] [stderr]    Compiling shlex v1.3.0
[INFO] [stderr]    Compiling pkg-config v0.3.31
[INFO] [stderr]     Checking stable_deref_trait v1.2.0
[INFO] [stderr]    Compiling vcpkg v0.2.15
[INFO] [stderr]     Checking writeable v0.5.5
[INFO] [stderr]     Checking litemap v0.7.4
[INFO] [stderr]    Compiling glob v0.3.1
[INFO] [stderr]    Compiling regex-syntax v0.8.5
[INFO] [stderr]    Compiling cfg-if v1.0.0
[INFO] [stderr]     Checking icu_locid_transform_data v1.5.0
[INFO] [stderr]    Compiling minimal-lexical v0.2.1
[INFO] [stderr]    Compiling memchr v2.7.4
[INFO] [stderr]    Compiling either v1.13.0
[INFO] [stderr]    Compiling libloading v0.8.6
[INFO] [stderr]    Compiling bindgen v0.69.5
[INFO] [stderr]     Checking icu_properties_data v1.5.0
[INFO] [stderr]    Compiling lazycell v1.3.0
[INFO] [stderr]    Compiling itertools v0.12.1
[INFO] [stderr]    Compiling rustversion v1.0.18
[INFO] [stderr]    Compiling quick-error v1.2.3
[INFO] [stderr]    Compiling bitflags v2.6.0
[INFO] [stderr]    Compiling lazy_static v1.5.0
[INFO] [stderr]     Checking icu_normalizer_data v1.5.0
[INFO] [stderr]     Checking utf16_iter v1.0.5
[INFO] [stderr]     Checking smallvec v1.13.2
[INFO] [stderr]     Checking utf8_iter v1.0.4
[INFO] [stderr]    Compiling heck v0.5.0
[INFO] [stderr]     Checking write16 v1.0.0
[INFO] [stderr]    Compiling rustc-hash v1.1.0
[INFO] [stderr]    Compiling semver v0.1.20
[INFO] [stderr]    Compiling fs-utils v1.1.4
[INFO] [stderr]    Compiling thiserror v1.0.69
[INFO] [stderr]    Compiling clang-sys v1.8.1
[INFO] [stderr]     Checking utf8parse v0.2.2
[INFO] [stderr]     Checking is_terminal_polyfill v1.70.1
[INFO] [stderr]     Checking anstyle-parse v0.2.6
[INFO] [stderr]     Checking anstyle v1.0.10
[INFO] [stderr]    Compiling rustc_version v0.1.7
[INFO] [stderr]     Checking percent-encoding v2.3.1
[INFO] [stderr]     Checking colorchoice v1.0.3
[INFO] [stderr]     Checking anstyle-query v1.1.2
[INFO] [stderr]    Compiling thiserror v2.0.4
[INFO] [stderr]     Checking clap_lex v0.7.3
[INFO] [stderr]    Compiling newtype_derive v0.1.6
[INFO] [stderr]     Checking form_urlencoded v1.2.1
[INFO] [stderr]     Checking adler2 v2.0.0
[INFO] [stderr]    Compiling quote v1.0.37
[INFO] [stderr]    Compiling nom v7.1.3
[INFO] [stderr]     Checking strsim v0.11.1
[INFO] [stderr]     Checking hashbrown v0.15.2
[INFO] [stderr]     Checking equivalent v1.0.1
[INFO] [stderr]    Compiling syn v2.0.90
[INFO] [stderr]     Checking anstream v0.6.18
[INFO] [stderr]    Compiling regex-automata v0.4.9
[INFO] [stderr]     Checking miniz_oxide v0.8.0
[INFO] [stderr]     Checking crc32fast v1.4.2
[INFO] [stderr]     Checking linear-map v1.2.0
[INFO] [stderr]     Checking byteorder v1.5.0
[INFO] [stderr]     Checking aho-corasick v1.1.3
[INFO] [stderr]     Checking memmap2 v0.9.5
[INFO] [stderr]     Checking custom_derive v0.1.7
[INFO] [stderr]     Checking clap_builder v4.5.22
[INFO] [stderr]     Checking ieee754 v0.2.6
[INFO] [stderr]     Checking indexmap v2.7.0
[INFO] [stderr]    Compiling jobserver v0.1.32
[INFO] [stderr]     Checking flate2 v1.0.35
[INFO] [stderr]    Compiling cc v1.2.2
[INFO] [stderr]     Checking faimm v0.5.0
[INFO] [stderr]    Compiling cexpr v0.6.0
[INFO] [stderr]    Compiling cmake v0.1.52
[INFO] [stderr]    Compiling openssl-src v300.4.1+3.4.0
[INFO] [stderr]    Compiling lzma-sys v0.1.20
[INFO] [stderr]    Compiling bzip2-sys v0.1.11+1.0.8
[INFO] [stderr]    Compiling curl-sys v0.4.78+curl-8.11.0
[INFO] [stderr]    Compiling libz-sys v1.1.20
[INFO] [stderr]    Compiling openssl-sys v0.9.104
[INFO] [stderr]    Compiling regex v1.11.1
[INFO] [stderr]    Compiling synstructure v0.13.1
[INFO] [stderr]    Compiling zerofrom-derive v0.1.5
[INFO] [stderr]    Compiling yoke-derive v0.7.5
[INFO] [stderr]    Compiling zerovec-derive v0.10.3
[INFO] [stderr]    Compiling displaydoc v0.2.5
[INFO] [stderr]    Compiling icu_provider_macros v1.5.0
[INFO] [stderr]    Compiling thiserror-impl v1.0.69
[INFO] [stderr]    Compiling strum_macros v0.26.4
[INFO] [stderr]    Compiling derive-new v0.6.0
[INFO] [stderr]    Compiling thiserror-impl v2.0.4
[INFO] [stderr]    Compiling derive-new v0.7.0
[INFO] [stderr]    Compiling clap_derive v4.5.18
[INFO] [stderr]     Checking zerofrom v0.1.5
[INFO] [stderr]     Checking yoke v0.7.5
[INFO] [stderr]     Checking zerovec v0.10.4
[INFO] [stderr]     Checking bio-types v1.0.4
[INFO] [stderr]     Checking clap v4.5.22
[INFO] [stderr]     Checking tinystr v0.7.6
[INFO] [stderr]     Checking icu_collections v1.5.0
[INFO] [stderr]     Checking icu_locid v1.5.0
[INFO] [stderr]     Checking icu_provider v1.5.0
[INFO] [stderr]     Checking icu_locid_transform v1.5.0
[INFO] [stderr]     Checking icu_properties v1.5.1
[INFO] [stderr]    Compiling hts-sys v2.2.0
[INFO] [stderr]     Checking icu_normalizer v1.5.0
[INFO] [stderr]     Checking idna_adapter v1.2.0
[INFO] [stderr]     Checking idna v1.0.3
[INFO] [stderr]     Checking url v2.5.4
[INFO] [stderr]     Checking rust-htslib v0.49.0
[INFO] [stderr]     Checking vcfverifier v0.1.1 (/opt/rustwide/workdir)
[INFO] [stderr]     Finished `dev` profile [unoptimized + debuginfo] target(s) in 3m 30s
[INFO] running `Command { std: "docker" "inspect" "dd571c120553a9eccca40c1e455782648630fe0d66181cb0c646523c7f6e9eb5", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "dd571c120553a9eccca40c1e455782648630fe0d66181cb0c646523c7f6e9eb5", kill_on_drop: false }`
[INFO] [stdout] dd571c120553a9eccca40c1e455782648630fe0d66181cb0c646523c7f6e9eb5