[INFO] cloning repository https://github.com/vliviu/HME_toolbox_RUST
[INFO] running `Command { std: "git" "-c" "credential.helper=" "-c" "credential.helper=/workspace/cargo-home/bin/git-credential-null" "clone" "--bare" "https://github.com/vliviu/HME_toolbox_RUST" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fvliviu%2FHME_toolbox_RUST", kill_on_drop: false }`
[INFO] [stderr] Cloning into bare repository '/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fvliviu%2FHME_toolbox_RUST'...
[INFO] running `Command { std: "git" "rev-parse" "HEAD", kill_on_drop: false }`
[INFO] [stdout] 28bd142e0563289e73de2ee0a5a67bce2a061b17
[INFO] checking vliviu/HME_toolbox_RUST against master#3129d37ef7075ee3cbaa3d6cbe1b5794f67192b0 for pr-143164
[INFO] running `Command { std: "git" "clone" "/workspace/cache/git-repos/https%3A%2F%2Fgithub.com%2Fvliviu%2FHME_toolbox_RUST" "/workspace/builds/worker-3-tc2/source", kill_on_drop: false }`
[INFO] [stderr] Cloning into '/workspace/builds/worker-3-tc2/source'...
[INFO] [stderr] done.
[INFO] started tweaking git repo https://github.com/vliviu/HME_toolbox_RUST
[INFO] finished tweaking git repo https://github.com/vliviu/HME_toolbox_RUST
[INFO] tweaked toml for git repo https://github.com/vliviu/HME_toolbox_RUST written to /workspace/builds/worker-3-tc2/source/Cargo.toml
[INFO] validating manifest of git repo https://github.com/vliviu/HME_toolbox_RUST on toolchain 3129d37ef7075ee3cbaa3d6cbe1b5794f67192b0
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+3129d37ef7075ee3cbaa3d6cbe1b5794f67192b0" "metadata" "--manifest-path" "Cargo.toml" "--no-deps", kill_on_drop: false }`
[INFO] crate git repo https://github.com/vliviu/HME_toolbox_RUST already has a lockfile, it will not be regenerated
[INFO] running `Command { std: CARGO_HOME="/workspace/cargo-home" RUSTUP_HOME="/workspace/rustup-home" "/workspace/cargo-home/bin/cargo" "+3129d37ef7075ee3cbaa3d6cbe1b5794f67192b0" "fetch" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] [stderr]     Blocking waiting for file lock on package cache
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[INFO] [stderr]   Downloaded fasta v0.1.3
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[INFO] [stderr]   Downloaded bio v0.38.0
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:cf8efcab8866f2cf4285301c7418e2f4f2a9b088c91ba69c40d5b659f81557f7" "/opt/rustwide/cargo-home/bin/cargo" "+3129d37ef7075ee3cbaa3d6cbe1b5794f67192b0" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
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[INFO] running `Command { std: "docker" "start" "-a" "57540a6937fd329b51e03d59b4c73b93584394e0cf5bc41d35694cbd1156a60a", kill_on_drop: false }`
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[INFO] running `Command { std: "docker" "rm" "-f" "57540a6937fd329b51e03d59b4c73b93584394e0cf5bc41d35694cbd1156a60a", kill_on_drop: false }`
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[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc2/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-3-tc2/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "RUSTDOCFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "ghcr.io/rust-lang/crates-build-env/linux@sha256:cf8efcab8866f2cf4285301c7418e2f4f2a9b088c91ba69c40d5b659f81557f7" "/opt/rustwide/cargo-home/bin/cargo" "+3129d37ef7075ee3cbaa3d6cbe1b5794f67192b0" "check" "--frozen" "--all" "--all-targets" "--message-format=json", kill_on_drop: false }`
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[INFO] running `Command { std: "docker" "start" "-a" "71526814163c41d0ca5e4ceae2a2644c2ff60726964a5cbbf775afbf02c96376", kill_on_drop: false }`
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[INFO] [stderr]     Checking hme_toolbox v0.1.0 (/opt/rustwide/workdir)
[INFO] [stdout] warning: unused import: `std::fs::File`
[INFO] [stdout]  --> tests/fasta_test.rs:2:5
[INFO] [stdout]   |
[INFO] [stdout] 2 | use std::fs::File;
[INFO] [stdout]   |     ^^^^^^^^^^^^^
[INFO] [stdout]   |
[INFO] [stdout]   = note: `#[warn(unused_imports)]` on by default
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unused imports: `BufReader` and `self`
[INFO] [stdout]  --> tests/fasta_test.rs:3:15
[INFO] [stdout]   |
[INFO] [stdout] 3 | use std::io::{self, BufReader}; // Ensure you have plotters dependency
[INFO] [stdout]   |               ^^^^  ^^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unused import: `hme_toolbox::clustering::hme::HMECluster`
[INFO] [stdout]  --> tests/fasta_test.rs:6:5
[INFO] [stdout]   |
[INFO] [stdout] 6 | use hme_toolbox::clustering::hme::HMECluster;
[INFO] [stdout]   |     ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stdout] warning: unused import: `hme_toolbox::plotter::plot_clusters as imported_plot_clusters`
[INFO] [stdout]   --> tests/fasta_test.rs:10:5
[INFO] [stdout]    |
[INFO] [stdout] 10 | use hme_toolbox::plotter::plot_clusters as imported_plot_clusters;
[INFO] [stdout]    |     ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
[INFO] [stdout] 
[INFO] [stdout] 
[INFO] [stderr]     Finished `dev` profile [unoptimized + debuginfo] target(s) in 1m 32s
[INFO] [stderr] warning: the following packages contain code that will be rejected by a future version of Rust: nalgebra v0.27.1
[INFO] [stderr] note: to see what the problems were, use the option `--future-incompat-report`, or run `cargo report future-incompatibilities --id 2`
[INFO] running `Command { std: "docker" "inspect" "71526814163c41d0ca5e4ceae2a2644c2ff60726964a5cbbf775afbf02c96376", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "71526814163c41d0ca5e4ceae2a2644c2ff60726964a5cbbf775afbf02c96376", kill_on_drop: false }`
[INFO] [stdout] 71526814163c41d0ca5e4ceae2a2644c2ff60726964a5cbbf775afbf02c96376
